RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 TMEM67Q5HYA8 995 aa16.08■□□□□ 0.16
HDAC7-222ENST00000477937 TAPT1Q6NXT6 567 aa16.08■□□□□ 0.16
HDAC7-222ENST00000477937 CHST3Q7LGC8 479 aa16.08■□□□□ 0.16
HDAC7-222ENST00000477937 SKAP1Q86WV1 359 aa16.08■□□□□ 0.16
HDAC7-222ENST00000477937 FBXO11Q86XK2 927 aa16.08■□□□□ 0.16
HDAC7-222ENST00000477937 CCDC136Q96JN2 1154 aa16.08■□□□□ 0.16
HDAC7-222ENST00000477937 AP5M1Q9H0R1 490 aa16.08■□□□□ 0.16
HDAC7-222ENST00000477937 PRDM5Q9NQX1 630 aaPredicted RBP16.08■□□□□ 0.16
HDAC7-222ENST00000477937 PDGFCQ9NRA1 345 aa16.08■□□□□ 0.16
HDAC7-222ENST00000477937 MAD2L2Q9UI95 211 aa16.08■□□□□ 0.16
HDAC7-222ENST00000477937 GNEQ9Y223 722 aaKnown RBP16.08■□□□□ 0.16
HDAC7-222ENST00000477937 MRPL11Q9Y3B7 192 aaKnown RBP16.08■□□□□ 0.16
HDAC7-222ENST00000477937 DDX49Q9Y6V7 483 aaKnown RBP16.08■□□□□ 0.16
HDAC7-222ENST00000477937 SMPD1P17405 629 aa16.07■□□□□ 0.16
HDAC7-222ENST00000477937 NKX3-2P78367 333 aa16.07■□□□□ 0.16
HDAC7-222ENST00000477937 PDE4DQ08499 809 aa16.07■□□□□ 0.16
HDAC7-222ENST00000477937 CASC1Q6TDU7 716 aa16.07■□□□□ 0.16
HDAC7-222ENST00000477937 CATIPQ7Z7H3 387 aa16.07■□□□□ 0.16
HDAC7-222ENST00000477937 TLK2Q86UE8 772 aa16.07■□□□□ 0.16
HDAC7-222ENST00000477937 MCF2L2Q86YR7 1114 aa16.07■□□□□ 0.16
HDAC7-222ENST00000477937 TDHQ8IZJ6 230 aa16.07■□□□□ 0.16
HDAC7-222ENST00000477937 IGDCC4Q8TDY8 1250 aa16.07■□□□□ 0.16
HDAC7-222ENST00000477937 VTI1AQ96AJ9 217 aa16.07■□□□□ 0.16
HDAC7-222ENST00000477937 AMNQ9BXJ7 453 aa16.07■□□□□ 0.16
HDAC7-222ENST00000477937 ANO2Q9NQ90 1003 aa16.07■□□□□ 0.16
HDAC7-222ENST00000477937 Q9Y3F1 56 aa16.07■□□□□ 0.16
HDAC7-222ENST00000477937 ELP1O95163 1332 aa16.07■□□□□ 0.16
HDAC7-222ENST00000477937 KIAA1217Q5T5P2 1943 aa16.06■□□□□ 0.16
HDAC7-222ENST00000477937 DCDC2CA8MYV0 355 aa16.06■□□□□ 0.16
HDAC7-222ENST00000477937 DYNC1LI2O43237 492 aaPredicted RBP16.06■□□□□ 0.16
HDAC7-222ENST00000477937 ANTXR2P58335 489 aa16.06■□□□□ 0.16
HDAC7-222ENST00000477937 BEX3Q00994 111 aa16.06■□□□□ 0.16
HDAC7-222ENST00000477937 GRM4Q14833 912 aa16.06■□□□□ 0.16
HDAC7-222ENST00000477937 MB21D2Q8IYB1 491 aaPredicted RBP16.06■□□□□ 0.16
HDAC7-222ENST00000477937 TOX2Q96NM4 488 aa16.06■□□□□ 0.16
HDAC7-222ENST00000477937 MTA3Q9BTC8 594 aa16.06■□□□□ 0.16
HDAC7-222ENST00000477937 WDR11Q9BZH6 1224 aa16.06■□□□□ 0.16
HDAC7-222ENST00000477937 SENP2Q9HC62 589 aa16.06■□□□□ 0.16
HDAC7-222ENST00000477937 PDLIM7Q9NR12 457 aa16.06■□□□□ 0.16
HDAC7-222ENST00000477937 PCDH10Q9P2E7 1040 aa16.06■□□□□ 0.16
HDAC7-222ENST00000477937 MROH7Q68CQ1 1323 aa16.05■□□□□ 0.16
HDAC7-222ENST00000477937 SLC27A2O14975 620 aa16.05■□□□□ 0.16
HDAC7-222ENST00000477937 ZBTB5O15062 677 aa16.05■□□□□ 0.16
HDAC7-222ENST00000477937 CTAGE5O15320 804 aa16.05■□□□□ 0.16
HDAC7-222ENST00000477937 ZEB2O60315 1214 aa16.05■□□□□ 0.16
HDAC7-222ENST00000477937 PQBP1O60828 265 aaKnown RBP16.05■□□□□ 0.16
HDAC7-222ENST00000477937 CLTBP09497 229 aa16.05■□□□□ 0.16
HDAC7-222ENST00000477937 MCM5P33992 734 aa16.05■□□□□ 0.16
HDAC7-222ENST00000477937 TROAPQ12815 778 aa16.05■□□□□ 0.16
HDAC7-222ENST00000477937 TRAF1Q13077 416 aa16.05■□□□□ 0.16
HDAC7-222ENST00000477937 NECTIN1Q15223 517 aa16.05■□□□□ 0.16
HDAC7-222ENST00000477937 FSCN1Q16658 493 aaKnown RBP16.05■□□□□ 0.16
HDAC7-222ENST00000477937 DUSP28Q4G0W2 176 aa16.05■□□□□ 0.16
HDAC7-222ENST00000477937 CREB3L3Q68CJ9 461 aa16.05■□□□□ 0.16
HDAC7-222ENST00000477937 ANKRD33Q7Z3H0 272 aa16.05■□□□□ 0.16
HDAC7-222ENST00000477937 TBC1D5Q92609 795 aa16.05■□□□□ 0.16
HDAC7-222ENST00000477937 MTMR8Q96EF0 704 aa16.05■□□□□ 0.16
HDAC7-222ENST00000477937 A0A0U1RQG5 324 aaPredicted RBP16.04■□□□□ 0.16
HDAC7-222ENST00000477937 RBM47A0AV96 593 aaKnown RBP16.04■□□□□ 0.16
HDAC7-222ENST00000477937 TRIM43BA6NCK2 446 aa16.04■□□□□ 0.16
HDAC7-222ENST00000477937 PRC1O43663 620 aa16.04■□□□□ 0.16
HDAC7-222ENST00000477937 CABYRO75952 493 aa16.04■□□□□ 0.16
HDAC7-222ENST00000477937 EDNRBP24530 442 aa16.04■□□□□ 0.16
HDAC7-222ENST00000477937 RNF20Q5VTR2 975 aa16.04■□□□□ 0.16
HDAC7-222ENST00000477937 SH3RF1Q7Z6J0 888 aa16.04■□□□□ 0.16
HDAC7-222ENST00000477937 TMTC2Q8N394 836 aa16.04■□□□□ 0.16
HDAC7-222ENST00000477937 TRIM43Q96BQ3 446 aaPredicted RBP16.04■□□□□ 0.16
HDAC7-222ENST00000477937 TMEM87BQ96K49 555 aa16.04■□□□□ 0.16
HDAC7-222ENST00000477937 MAP3K14Q99558 947 aa16.04■□□□□ 0.16
HDAC7-222ENST00000477937 RIOX1Q9H6W3 641 aa16.04■□□□□ 0.16
HDAC7-222ENST00000477937 PCDHA1Q9Y5I3 950 aa16.04■□□□□ 0.16
HDAC7-222ENST00000477937 RANBP2P49792 3224 aaKnown RBP16.03■□□□□ 0.16
HDAC7-222ENST00000477937 CDC45O75419 566 aa16.03■□□□□ 0.16
HDAC7-222ENST00000477937 CFBP00751 764 aa16.03■□□□□ 0.16
HDAC7-222ENST00000477937 NEFLP07196 543 aa16.03■□□□□ 0.16
HDAC7-222ENST00000477937 LRIT3Q3SXY7 679 aa16.03■□□□□ 0.16
HDAC7-222ENST00000477937 TMEM63BQ5T3F8 832 aa16.03■□□□□ 0.16
HDAC7-222ENST00000477937 NFXL1Q6ZNB6 911 aa16.03■□□□□ 0.16
HDAC7-222ENST00000477937 HOMER1Q86YM7 354 aa16.03■□□□□ 0.16
HDAC7-222ENST00000477937 CTCFLQ8NI51 663 aaPredicted RBP16.03■□□□□ 0.16
HDAC7-222ENST00000477937 SYTL5Q8TDW5 730 aaPredicted RBP16.03■□□□□ 0.16
HDAC7-222ENST00000477937 NSUN6Q8TEA1 469 aaKnown RBP16.03■□□□□ 0.16
HDAC7-222ENST00000477937 SCFD2Q8WU76 684 aa16.03■□□□□ 0.16
HDAC7-222ENST00000477937 BADQ92934 168 aa16.03■□□□□ 0.16
HDAC7-222ENST00000477937 TAAR1Q96RJ0 339 aa16.03■□□□□ 0.16
HDAC7-222ENST00000477937 LY9Q9HBG7 655 aa16.03■□□□□ 0.16
HDAC7-222ENST00000477937 TMEM39AQ9NV64 488 aa16.03■□□□□ 0.16
HDAC7-222ENST00000477937 MYH7BA7E2Y1 1941 aa16.03■□□□□ 0.16
HDAC7-222ENST00000477937 CCDC69A6NI79 296 aa16.02■□□□□ 0.16
HDAC7-222ENST00000477937 ARVCFO00192 962 aa16.02■□□□□ 0.16
HDAC7-222ENST00000477937 KIAA0355O15063 1070 aa16.02■□□□□ 0.16
HDAC7-222ENST00000477937 NKRFO15226 690 aaKnown RBP eCLIP16.02■□□□□ 0.16
HDAC7-222ENST00000477937 RAG1P15918 1043 aa16.02■□□□□ 0.16
HDAC7-222ENST00000477937 PTGS1P23219 599 aa16.02■□□□□ 0.16
HDAC7-222ENST00000477937 CDK7P50613 346 aa16.02■□□□□ 0.16
HDAC7-222ENST00000477937 FAAP100Q0VG06 881 aa16.02■□□□□ 0.16
HDAC7-222ENST00000477937 CXCL17Q6UXB2 119 aa16.02■□□□□ 0.16
HDAC7-222ENST00000477937 ZNF654Q8IZM8 581 aa16.02■□□□□ 0.16
HDAC7-222ENST00000477937 SAMD3Q8N6K7 520 aa16.02■□□□□ 0.16
HDAC7-222ENST00000477937 PIGSQ96S52 555 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms