RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 FCER1AP12319 257 aa15.06■□□□□ 0
HDAC7-221ENST00000477203 GTF2F1P35269 517 aaKnown RBP eCLIP15.06■□□□□ 02e-7■■■■□ 23.7
HDAC7-221ENST00000477203 KMT5BQ4FZB7 885 aa15.06■□□□□ 0
HDAC7-221ENST00000477203 NT5DC1Q5TFE4 455 aa15.06■□□□□ 0
HDAC7-221ENST00000477203 ARL6IP4Q66PJ3 421 aaKnown RBP15.06■□□□□ 0
HDAC7-221ENST00000477203 CDK5RAP3Q96JB5 506 aa15.06■□□□□ 0
HDAC7-221ENST00000477203 PMS1P54277 932 aaKnown RBP15.06■□□□□ 0
HDAC7-221ENST00000477203 MCM6Q14566 821 aa15.06■□□□□ 0
HDAC7-221ENST00000477203 PRAMEF18Q5VWM3 479 aa15.06■□□□□ 0
HDAC7-221ENST00000477203 ENOX1Q8TC92 643 aaKnown RBP15.06■□□□□ 0
HDAC7-221ENST00000477203 DHX36Q9H2U1 1008 aaKnown RBP15.06■□□□□ 0
HDAC7-221ENST00000477203 BCS1LQ9Y276 419 aa15.06■□□□□ 0
HDAC7-221ENST00000477203 GTPBP6O43824 516 aaPredicted RBP15.05■□□□□ -0
HDAC7-221ENST00000477203 STAT3P40763 770 aa15.05■□□□□ -0
HDAC7-221ENST00000477203 TRMT1LQ7Z2T5 733 aaKnown RBP15.05■□□□□ -0
HDAC7-221ENST00000477203 CUL5Q93034 780 aa15.05■□□□□ -0
HDAC7-221ENST00000477203 GSDMAQ96QA5 445 aa15.05■□□□□ -0
HDAC7-221ENST00000477203 DESI2Q9BSY9 194 aa15.05■□□□□ -0
HDAC7-221ENST00000477203 OGFRQ9NZT2 677 aa15.05■□□□□ -0
HDAC7-221ENST00000477203 TBC1D7Q9P0N9 293 aa15.05■□□□□ -0
HDAC7-221ENST00000477203 GJA3Q9Y6H8 435 aa15.05■□□□□ -0
HDAC7-221ENST00000477203 EDIL3O43854 480 aa15.05■□□□□ -0
HDAC7-221ENST00000477203 KCNA3P22001 575 aa15.05■□□□□ -0
HDAC7-221ENST00000477203 HMGB2P26583 209 aaKnown RBP15.05■□□□□ -0
HDAC7-221ENST00000477203 KIAA1755Q5JYT7 1200 aa15.05■□□□□ -0
HDAC7-221ENST00000477203 CEP135Q66GS9 1140 aa15.05■□□□□ -0
HDAC7-221ENST00000477203 RSBN1LQ6PCB5 846 aaPredicted RBP15.05■□□□□ -0
HDAC7-221ENST00000477203 DAGLBQ8NCG7 672 aa15.05■□□□□ -0
HDAC7-221ENST00000477203 KIFC2Q96AC6 838 aa15.05■□□□□ -0
HDAC7-221ENST00000477203 ZHX3Q9H4I2 956 aa15.05■□□□□ -0
HDAC7-221ENST00000477203 PSDA5PKW4 1024 aaPredicted RBP15.04■□□□□ -0
HDAC7-221ENST00000477203 CBFA2T2O43439 604 aa15.04■□□□□ -0
HDAC7-221ENST00000477203 SNHG28P0DPA3 235 aa15.04■□□□□ -0
HDAC7-221ENST00000477203 GALNT17Q6IS24 598 aa15.04■□□□□ -0
HDAC7-221ENST00000477203 VSTM4Q8IW00 320 aa15.04■□□□□ -0
HDAC7-221ENST00000477203 SPATA20Q8TB22 786 aa15.04■□□□□ -0
HDAC7-221ENST00000477203 TBC1D5Q92609 795 aa15.04■□□□□ -0
HDAC7-221ENST00000477203 CCDC17Q96LX7 622 aa15.04■□□□□ -0
HDAC7-221ENST00000477203 SLC39A2Q9NP94 309 aa15.04■□□□□ -0
HDAC7-221ENST00000477203 ST7Q9NRC1 585 aa15.04■□□□□ -0
HDAC7-221ENST00000477203 ZNF70Q9UC06 446 aaPredicted RBP15.04■□□□□ -0
HDAC7-221ENST00000477203 SPDYE2BA6NHP3 402 aa15.04■□□□□ -0
HDAC7-221ENST00000477203 SPDYE6P0CI01 402 aa15.04■□□□□ -0
HDAC7-221ENST00000477203 GSDMDP57764 484 aa15.04■□□□□ -0
HDAC7-221ENST00000477203 PDE4DQ08499 809 aa15.04■□□□□ -0
HDAC7-221ENST00000477203 PTPN14Q15678 1187 aa15.04■□□□□ -0
HDAC7-221ENST00000477203 NIM1KQ8IY84 436 aa15.04■□□□□ -0
HDAC7-221ENST00000477203 SNX29Q8TEQ0 813 aa15.04■□□□□ -0
HDAC7-221ENST00000477203 IDI2Q9BXS1 227 aa15.04■□□□□ -0
HDAC7-221ENST00000477203 FBXO28Q9NVF7 368 aa15.04■□□□□ -0
HDAC7-221ENST00000477203 DDX25Q9UHL0 483 aaKnown RBP15.04■□□□□ -0
HDAC7-221ENST00000477203 ASTN2O75129 1339 aaPredicted RBP15.04■□□□□ -0
HDAC7-221ENST00000477203 CCDC66A2RUB6 948 aa15.03■□□□□ -0
HDAC7-221ENST00000477203 TULP1O00294 542 aaPredicted RBP15.03■□□□□ -0
HDAC7-221ENST00000477203 N4BP3O15049 544 aa15.03■□□□□ -0
HDAC7-221ENST00000477203 FAM83BQ5T0W9 1011 aa15.03■□□□□ -0
HDAC7-221ENST00000477203 GPATCH4Q5T3I0 446 aaKnown RBP15.03■□□□□ -0
HDAC7-221ENST00000477203 SPATA1Q5VX52 437 aa15.03■□□□□ -0
HDAC7-221ENST00000477203 E4F1Q66K89 784 aaPredicted RBP15.03■□□□□ -0
HDAC7-221ENST00000477203 KCNK18Q7Z418 384 aa15.03■□□□□ -0
HDAC7-221ENST00000477203 P2RX7Q99572 595 aaKnown RBP15.03■□□□□ -0
HDAC7-221ENST00000477203 MRPL12P52815 198 aaKnown RBP15.03■□□□□ -0
HDAC7-221ENST00000477203 CXCL9Q07325 125 aa15.03■□□□□ -0
HDAC7-221ENST00000477203 PAK1Q13153 545 aa15.03■□□□□ -0
HDAC7-221ENST00000477203 MTF1Q14872 753 aa15.03■□□□□ -0
HDAC7-221ENST00000477203 LRRC41Q15345 812 aa15.03■□□□□ -0
HDAC7-221ENST00000477203 TRIML1Q8N9V2 468 aa15.03■□□□□ -0
HDAC7-221ENST00000477203 CYP2W1Q8TAV3 490 aa15.03■□□□□ -0
HDAC7-221ENST00000477203 MMTAG2Q9BU76 263 aaKnown RBP15.03■□□□□ -0
HDAC7-221ENST00000477203 TNS1Q9HBL0 1735 aaKnown RBP15.03■□□□□ -0
HDAC7-221ENST00000477203 MYH7BA7E2Y1 1941 aa15.03■□□□□ -0
HDAC7-221ENST00000477203 FOCADQ5VW36 1801 aa15.03■□□□□ -0
HDAC7-221ENST00000477203 ZNF18P17022 549 aa15.03■□□□□ -0
HDAC7-221ENST00000477203 PRR16Q569H4 304 aa15.03■□□□□ -0
HDAC7-221ENST00000477203 TMEM179Q6ZVK1 233 aa15.03■□□□□ -0
HDAC7-221ENST00000477203 CCAR2Q8N163 923 aaKnown RBP15.03■□□□□ -0
HDAC7-221ENST00000477203 CFBP00751 764 aa15.02■□□□□ -0
HDAC7-221ENST00000477203 NCBP1Q09161 790 aaKnown RBP15.02■□□□□ -0
HDAC7-221ENST00000477203 STK4Q13043 487 aa15.02■□□□□ -0
HDAC7-221ENST00000477203 R3HDM1Q15032 1099 aaKnown RBP15.02■□□□□ -0
HDAC7-221ENST00000477203 SUPT20HQ8NEM7 779 aa15.02■□□□□ -0
HDAC7-221ENST00000477203 CALML4Q96GE6 196 aa15.02■□□□□ -0
HDAC7-221ENST00000477203 TRIM47Q96LD4 638 aa15.02■□□□□ -0
HDAC7-221ENST00000477203 COL4A5P29400 1685 aa15.02□□□□□ -0.01
HDAC7-221ENST00000477203 MEIS1O00470 390 aa15.02□□□□□ -0.01
HDAC7-221ENST00000477203 TNNT3P45378 269 aaPredicted RBP15.02□□□□□ -0.01
HDAC7-221ENST00000477203 ECM1Q16610 540 aa15.02□□□□□ -0.01
HDAC7-221ENST00000477203 SAMD7Q7Z3H4 446 aa15.02□□□□□ -0.01
HDAC7-221ENST00000477203 GLIS3Q8NEA6 775 aa15.02□□□□□ -0.01
HDAC7-221ENST00000477203 RIC8AQ9NPQ8 531 aa15.02□□□□□ -0.01
HDAC7-221ENST00000477203 HDAC9Q9UKV0 1011 aa15.02□□□□□ -0.01
HDAC7-221ENST00000477203 NKRFO15226 690 aaKnown RBP eCLIP15.01□□□□□ -0.01
HDAC7-221ENST00000477203 BMP3P12645 472 aa15.01□□□□□ -0.01
HDAC7-221ENST00000477203 CAPN2P17655 700 aa15.01□□□□□ -0.01
HDAC7-221ENST00000477203 NOVP48745 357 aa15.01□□□□□ -0.01
HDAC7-221ENST00000477203 SYT10Q6XYQ8 523 aa15.01□□□□□ -0.01
HDAC7-221ENST00000477203 IGSF22Q8N9C0 903 aa15.01□□□□□ -0.01
HDAC7-221ENST00000477203 SRRTQ9BXP5 876 aaKnown RBP15.01□□□□□ -0.01
HDAC7-221ENST00000477203 EHD4Q9H223 541 aa15.01□□□□□ -0.01
HDAC7-221ENST00000477203 KRT31Q15323 416 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms