RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 JAG1P78504 1218 aa8.7□□□□□ -1.02
BRCA1-214ENST00000477152 PLS1Q14651 629 aa8.7□□□□□ -1.02
BRCA1-214ENST00000477152 SEPT2Q15019 361 aa8.7□□□□□ -1.02
BRCA1-214ENST00000477152 PPP1R26Q5T8A7 1209 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-214ENST00000477152 CLP1Q92989 425 aaKnown RBP8.7□□□□□ -1.02
BRCA1-214ENST00000477152 HINFPQ9BQA5 517 aa8.7□□□□□ -1.02
BRCA1-214ENST00000477152 SENP6Q9GZR1 1112 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-214ENST00000477152 SPATC1LQ9H0A9 340 aa8.7□□□□□ -1.02
BRCA1-214ENST00000477152 ANTXR1Q9H6X2 564 aa8.7□□□□□ -1.02
BRCA1-214ENST00000477152 CTDP1Q9Y5B0 961 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-214ENST00000477152 WNT7AO00755 349 aa8.69□□□□□ -1.02
BRCA1-214ENST00000477152 FLOT1O75955 427 aa8.69□□□□□ -1.02
BRCA1-214ENST00000477152 SYN1P17600 705 aa8.69□□□□□ -1.02
BRCA1-214ENST00000477152 ATP5JP18859 108 aa8.69□□□□□ -1.02
BRCA1-214ENST00000477152 ADD1P35611 737 aaKnown RBP8.69□□□□□ -1.02
BRCA1-214ENST00000477152 ICA1Q05084 483 aa8.69□□□□□ -1.02
BRCA1-214ENST00000477152 GABPAQ06546 454 aa8.69□□□□□ -1.02
BRCA1-214ENST00000477152 CCL14Q16627 93 aa8.69□□□□□ -1.02
BRCA1-214ENST00000477152 NCAPG2Q86XI2 1143 aa8.69□□□□□ -1.02
BRCA1-214ENST00000477152 DEFB123Q8N688 67 aa8.69□□□□□ -1.02
BRCA1-214ENST00000477152 ACER1Q8TDN7 264 aa8.69□□□□□ -1.02
BRCA1-214ENST00000477152 PURBQ96QR8 312 aaKnown RBP8.69□□□□□ -1.02
BRCA1-214ENST00000477152 KANSL2Q9H9L4 492 aa8.69□□□□□ -1.02
BRCA1-214ENST00000477152 DCP1AQ9NPI6 582 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-214ENST00000477152 LILRA1O75019 489 aa8.68□□□□□ -1.02
BRCA1-214ENST00000477152 CNMDO75829 334 aa8.68□□□□□ -1.02
BRCA1-214ENST00000477152 RLBP1P12271 317 aa8.68□□□□□ -1.02
BRCA1-214ENST00000477152 ADORA2AP29274 412 aa8.68□□□□□ -1.02
BRCA1-214ENST00000477152 UBE3CQ15386 1083 aa8.68□□□□□ -1.02
BRCA1-214ENST00000477152 TMCO4Q5TGY1 634 aa8.68□□□□□ -1.02
BRCA1-214ENST00000477152 CAPN12Q6ZSI9 719 aa8.68□□□□□ -1.02
BRCA1-214ENST00000477152 MOV10L1Q9BXT6 1211 aaKnown RBP8.68□□□□□ -1.02
BRCA1-214ENST00000477152 VCPKMTQ9H867 229 aa8.68□□□□□ -1.02
BRCA1-214ENST00000477152 BTBD7Q9P203 1132 aa8.68□□□□□ -1.02
BRCA1-214ENST00000477152 TMX2Q9Y320 296 aa8.68□□□□□ -1.02
BRCA1-214ENST00000477152 PFASO15067 1338 aa8.68□□□□□ -1.02
BRCA1-214ENST00000477152 TMEM229AB2RXF0 380 aa8.68□□□□□ -1.02
BRCA1-214ENST00000477152 SEPT4O43236 478 aa8.68□□□□□ -1.02
BRCA1-214ENST00000477152 ERCC3P19447 782 aa8.68□□□□□ -1.02
BRCA1-214ENST00000477152 ADD2P35612 726 aa8.68□□□□□ -1.02
BRCA1-214ENST00000477152 KCTD2Q14681 263 aa8.68□□□□□ -1.02
BRCA1-214ENST00000477152 OCLNQ16625 522 aa8.68□□□□□ -1.02
BRCA1-214ENST00000477152 ZNF697Q5TEC3 545 aa8.68□□□□□ -1.02
BRCA1-214ENST00000477152 CCDC116Q8IYX3 515 aa8.68□□□□□ -1.02
BRCA1-214ENST00000477152 PANK1Q8TE04 598 aa8.68□□□□□ -1.02
BRCA1-214ENST00000477152 PLA2G2EQ9NZK7 142 aa8.68□□□□□ -1.02
BRCA1-214ENST00000477152 ARPP21Q9UBL0 812 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-214ENST00000477152 STXBP5LQ9Y2K9 1186 aa8.68□□□□□ -1.02
BRCA1-214ENST00000477152 DIS3Q9Y2L1 958 aaKnown RBP8.68□□□□□ -1.02
BRCA1-214ENST00000477152 ZNFX1Q9P2E3 1918 aaKnown RBP8.67□□□□□ -1.02
BRCA1-214ENST00000477152 MBD4O95243 580 aa8.67□□□□□ -1.02
BRCA1-214ENST00000477152 SERPINB4P48594 390 aa8.67□□□□□ -1.02
BRCA1-214ENST00000477152 LRRC26Q2I0M4 334 aa8.67□□□□□ -1.02
BRCA1-214ENST00000477152 SHROOM1Q2M3G4 852 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-214ENST00000477152 DIEXFQ68CQ4 756 aaKnown RBP8.67□□□□□ -1.02
BRCA1-214ENST00000477152 FAM109BQ6ICB4 259 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-214ENST00000477152 RNF180Q86T96 592 aa8.67□□□□□ -1.02
BRCA1-214ENST00000477152 SDR42E1Q8WUS8 393 aa8.67□□□□□ -1.02
BRCA1-214ENST00000477152 MMP19Q99542 508 aa8.67□□□□□ -1.02
BRCA1-214ENST00000477152 HAUS7Q99871 368 aa8.67□□□□□ -1.02
BRCA1-214ENST00000477152 LRRCC1Q9C099 1032 aa8.67□□□□□ -1.02
BRCA1-214ENST00000477152 BCL11AQ9H165 835 aa8.67□□□□□ -1.02
BRCA1-214ENST00000477152 BOLA2Q9H3K6 86 aa8.67□□□□□ -1.02
BRCA1-214ENST00000477152 ARMT1Q9H993 441 aa8.67□□□□□ -1.02
BRCA1-214ENST00000477152 ZNF358Q9NW07 568 aa8.67□□□□□ -1.02
BRCA1-214ENST00000477152 PKD2L1Q9P0L9 805 aa8.67□□□□□ -1.02
BRCA1-214ENST00000477152 SLC4A4Q9Y6R1 1079 aa8.67□□□□□ -1.02
BRCA1-214ENST00000477152 DLL1O00548 723 aa8.66□□□□□ -1.02
BRCA1-214ENST00000477152 SLC3A2P08195 630 aaKnown RBP8.66□□□□□ -1.02
BRCA1-214ENST00000477152 RARBP10826 455 aa8.66□□□□□ -1.02
BRCA1-214ENST00000477152 CYBAP13498 195 aa8.66□□□□□ -1.02
BRCA1-214ENST00000477152 GNAT2P19087 354 aa8.66□□□□□ -1.02
BRCA1-214ENST00000477152 CYP2C19P33261 490 aa8.66□□□□□ -1.02
BRCA1-214ENST00000477152 GUCY1A2P33402 732 aa8.66□□□□□ -1.02
BRCA1-214ENST00000477152 SWI5Q1ZZU3 235 aa8.66□□□□□ -1.02
BRCA1-214ENST00000477152 C12orf60Q5U649 245 aa8.66□□□□□ -1.02
BRCA1-214ENST00000477152 GIMAP6Q6P9H5 292 aa8.66□□□□□ -1.02
BRCA1-214ENST00000477152 LCORLQ8N3X6 602 aa8.66□□□□□ -1.02
BRCA1-214ENST00000477152 MSL3Q8N5Y2 521 aaKnown RBP8.66□□□□□ -1.02
BRCA1-214ENST00000477152 NPLOC4Q8TAT6 608 aa8.66□□□□□ -1.02
BRCA1-214ENST00000477152 MKNK2Q9HBH9 465 aa8.66□□□□□ -1.02
BRCA1-214ENST00000477152 RAB6BQ9NRW1 208 aa8.66□□□□□ -1.02
BRCA1-214ENST00000477152 SERTAD1Q9UHV2 236 aa8.66□□□□□ -1.02
BRCA1-214ENST00000477152 CNPY2Q9Y2B0 182 aa8.66□□□□□ -1.02
BRCA1-214ENST00000477152 RBM19Q9Y4C8 960 aaKnown RBP8.66□□□□□ -1.02
BRCA1-214ENST00000477152 BAZ2AQ9UIF9 1905 aaKnown RBP8.66□□□□□ -1.02
BRCA1-214ENST00000477152 CENPFP49454 3210 aa8.66□□□□□ -1.02
BRCA1-214ENST00000477152 TCRBV5S4A2TA0A5A2 114 aa8.66□□□□□ -1.02
BRCA1-214ENST00000477152 PEX10O60683 326 aa8.66□□□□□ -1.02
BRCA1-214ENST00000477152 ZFYP08048 801 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-214ENST00000477152 CDK8P49336 464 aa8.66□□□□□ -1.02
BRCA1-214ENST00000477152 RTP1P59025 263 aa8.66□□□□□ -1.02
BRCA1-214ENST00000477152 CCDC174Q6PII3 467 aa8.66□□□□□ -1.02
BRCA1-214ENST00000477152 C16orf86Q6ZW13 317 aa8.66□□□□□ -1.02
BRCA1-214ENST00000477152 PRKD2Q9BZL6 878 aa8.66□□□□□ -1.02
BRCA1-214ENST00000477152 ZBTB40Q9NUA8 1239 aa8.66□□□□□ -1.02
BRCA1-214ENST00000477152 ATP11BQ9Y2G3 1177 aa8.66□□□□□ -1.02
BRCA1-214ENST00000477152 A0A0G2JMZ2 1700 aa8.66□□□□□ -1.02
BRCA1-214ENST00000477152 SOX1O00570 391 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-214ENST00000477152 STAT3P40763 770 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms