RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 SMARCA1P28370 1054 aa17.42■□□□□ 0.38
DFFA-203ENST00000476658 TMTC3Q6ZXV5 915 aa17.42■□□□□ 0.38
DFFA-203ENST00000476658 TBC1D5Q92609 795 aa17.42■□□□□ 0.38
DFFA-203ENST00000476658 UPF3BQ9BZI7 483 aaKnown RBP17.42■□□□□ 0.38
DFFA-203ENST00000476658 ABHD16BQ9H3Z7 469 aa17.42■□□□□ 0.38
DFFA-203ENST00000476658 ZSWIM6Q9HCJ5 1215 aa17.42■□□□□ 0.38
DFFA-203ENST00000476658 RBM28Q9NW13 759 aaKnown RBP17.42■□□□□ 0.38
DFFA-203ENST00000476658 ASTN1O14525 1302 aa17.42■□□□□ 0.38
DFFA-203ENST00000476658 LRRC37A2A6NM11 1700 aa17.41■□□□□ 0.38
DFFA-203ENST00000476658 SEC24BO95487 1268 aa17.41■□□□□ 0.38
DFFA-203ENST00000476658 CFBP00751 764 aa17.41■□□□□ 0.38
DFFA-203ENST00000476658 ZNF865P0CJ78 1059 aaPredicted RBP17.41■□□□□ 0.38
DFFA-203ENST00000476658 ACVR2BQ13705 512 aa17.41■□□□□ 0.38
DFFA-203ENST00000476658 ANKLE1Q8NAG6 615 aa17.41■□□□□ 0.38
DFFA-203ENST00000476658 RGS22Q8NE09 1264 aa17.41■□□□□ 0.38
DFFA-203ENST00000476658 TM6SF1Q9BZW5 370 aa17.41■□□□□ 0.38
DFFA-203ENST00000476658 DDX49Q9Y6V7 483 aaKnown RBP17.41■□□□□ 0.38
DFFA-203ENST00000476658 TNRC18O15417 2968 aaPredicted RBP17.41■□□□□ 0.38
DFFA-203ENST00000476658 MKI67P46013 3256 aaKnown RBP17.41■□□□□ 0.38
DFFA-203ENST00000476658 AKR1A1P14550 325 aa17.4■□□□□ 0.38
DFFA-203ENST00000476658 METAP2P50579 478 aaKnown RBP eCLIP17.4■□□□□ 0.38
DFFA-203ENST00000476658 ALDH5A1P51649 535 aaPredicted RBP17.4■□□□□ 0.38
DFFA-203ENST00000476658 PAWRQ96IZ0 340 aaKnown RBP17.4■□□□□ 0.38
DFFA-203ENST00000476658 MPHOSPH6Q99547 160 aaKnown RBP17.4■□□□□ 0.38
DFFA-203ENST00000476658 MAF1Q9H063 256 aa17.4■□□□□ 0.38
DFFA-203ENST00000476658 hCG_1642624A0A1W2PR95 340 aa17.39■□□□□ 0.37
DFFA-203ENST00000476658 MYCNP04198 464 aaPredicted RBP17.39■□□□□ 0.37
DFFA-203ENST00000476658 RARBP10826 455 aa17.39■□□□□ 0.37
DFFA-203ENST00000476658 RCAN1P53805 252 aa17.39■□□□□ 0.37
DFFA-203ENST00000476658 ANAPC15P60006 121 aa17.39■□□□□ 0.37
DFFA-203ENST00000476658 EEPD1Q7L9B9 569 aa17.39■□□□□ 0.37
DFFA-203ENST00000476658 FBXL16Q8N461 479 aa17.39■□□□□ 0.37
DFFA-203ENST00000476658 SYTL5Q8TDW5 730 aaPredicted RBP17.39■□□□□ 0.37
DFFA-203ENST00000476658 DIS3LQ8TF46 1054 aaKnown RBP17.39■□□□□ 0.37
DFFA-203ENST00000476658 AGXT2Q9BYV1 514 aa17.39■□□□□ 0.37
DFFA-203ENST00000476658 FAM184BQ9ULE4 1060 aa17.39■□□□□ 0.37
DFFA-203ENST00000476658 B4DLN1 442 aa17.38■□□□□ 0.37
DFFA-203ENST00000476658 OPLAHO14841 1288 aa17.38■□□□□ 0.37
DFFA-203ENST00000476658 MRPL12P52815 198 aaKnown RBP17.38■□□□□ 0.37
DFFA-203ENST00000476658 CCDC144BQ3MJ40 725 aa17.38■□□□□ 0.37
DFFA-203ENST00000476658 C8orf34Q49A92 452 aa17.38■□□□□ 0.37
DFFA-203ENST00000476658 NECAB2Q7Z6G3 386 aa17.38■□□□□ 0.37
DFFA-203ENST00000476658 UBE2Q1Q7Z7E8 422 aa17.38■□□□□ 0.37
DFFA-203ENST00000476658 FBXO16Q8IX29 292 aaPredicted RBP17.38■□□□□ 0.37
DFFA-203ENST00000476658 DNERQ8NFT8 737 aa17.38■□□□□ 0.37
DFFA-203ENST00000476658 LENG1Q96BZ8 264 aaPredicted RBP17.38■□□□□ 0.37
DFFA-203ENST00000476658 PDRG1Q9NUG6 133 aa17.38■□□□□ 0.37
DFFA-203ENST00000476658 COL20A1Q9P218 1284 aa17.38■□□□□ 0.37
DFFA-203ENST00000476658 LOC102724159A0A0B4J2E5 919 aa17.37■□□□□ 0.37
DFFA-203ENST00000476658 CCDC196A0A1B0GTZ2 297 aa17.37■□□□□ 0.37
DFFA-203ENST00000476658 CDC27P30260 824 aa17.37■□□□□ 0.37
DFFA-203ENST00000476658 PDE4DQ08499 809 aa17.37■□□□□ 0.37
DFFA-203ENST00000476658 TOB2Q14106 344 aaPredicted RBP17.37■□□□□ 0.37
DFFA-203ENST00000476658 PPP2R5BQ15173 497 aa17.37■□□□□ 0.37
DFFA-203ENST00000476658 PWP2Q15269 919 aaKnown RBP17.37■□□□□ 0.37
DFFA-203ENST00000476658 ARRDC4Q8NCT1 418 aa17.37■□□□□ 0.37
DFFA-203ENST00000476658 TAAR1Q96RJ0 339 aa17.37■□□□□ 0.37
DFFA-203ENST00000476658 KATNBL1Q9H079 304 aa17.37■□□□□ 0.37
DFFA-203ENST00000476658 XPNPEP3Q9NQH7 507 aa17.37■□□□□ 0.37
DFFA-203ENST00000476658 GTF3C3Q9Y5Q9 886 aa17.37■□□□□ 0.37
DFFA-203ENST00000476658 CNTNAP5Q8WYK1 1306 aa17.37■□□□□ 0.37
DFFA-203ENST00000476658 GCOM1H8Y6P7 765 aaPredicted RBP17.36■□□□□ 0.37
DFFA-203ENST00000476658 POLR2MP0CAP2 368 aa17.36■□□□□ 0.37
DFFA-203ENST00000476658 HOXA13P31271 388 aaPredicted RBP17.36■□□□□ 0.37
DFFA-203ENST00000476658 ADD1P35611 737 aaKnown RBP17.36■□□□□ 0.37
DFFA-203ENST00000476658 MNX1P50219 401 aaPredicted RBP17.36■□□□□ 0.37
DFFA-203ENST00000476658 HSD17B4P51659 736 aa17.36■□□□□ 0.37
DFFA-203ENST00000476658 GJC2Q5T442 439 aaPredicted RBP17.36■□□□□ 0.37
DFFA-203ENST00000476658 NOL8Q76FK4 1167 aaKnown RBP17.36■□□□□ 0.37
DFFA-203ENST00000476658 MORC4Q8TE76 937 aa17.36■□□□□ 0.37
DFFA-203ENST00000476658 NSUN6Q8TEA1 469 aaKnown RBP17.36■□□□□ 0.37
DFFA-203ENST00000476658 RMDN3Q96TC7 470 aa17.36■□□□□ 0.37
DFFA-203ENST00000476658 HTATIP2Q9BUP3 242 aa17.36■□□□□ 0.37
DFFA-203ENST00000476658 C11orf49Q9H6J7 331 aa17.36■□□□□ 0.37
DFFA-203ENST00000476658 VTA1Q9NP79 307 aa17.36■□□□□ 0.37
DFFA-203ENST00000476658 FAM217BQ9NTX9 383 aaPredicted RBP17.36■□□□□ 0.37
DFFA-203ENST00000476658 MAP3K20Q9NYL2 800 aaKnown RBP17.36■□□□□ 0.37
DFFA-203ENST00000476658 KIAA1217Q5T5P2 1943 aa17.36■□□□□ 0.37
DFFA-203ENST00000476658 KBTBD13C9JR72 458 aa17.35■□□□□ 0.37
DFFA-203ENST00000476658 DNM1LO00429 736 aa17.35■□□□□ 0.37
DFFA-203ENST00000476658 PGK1P00558 417 aa17.35■□□□□ 0.37
DFFA-203ENST00000476658 ADCYAP1R1P41586 468 aa17.35■□□□□ 0.37
DFFA-203ENST00000476658 GHRHRQ02643 423 aa17.35■□□□□ 0.37
DFFA-203ENST00000476658 ARHGEF16Q5VV41 709 aa17.35■□□□□ 0.37
DFFA-203ENST00000476658 HEATR3Q7Z4Q2 680 aa17.35■□□□□ 0.37
DFFA-203ENST00000476658 FCHSD1Q86WN1 690 aa17.35■□□□□ 0.37
DFFA-203ENST00000476658 SAMD3Q8N6K7 520 aa17.35■□□□□ 0.37
DFFA-203ENST00000476658 LARP6Q9BRS8 491 aaKnown RBP17.35■□□□□ 0.37
DFFA-203ENST00000476658 PDGFCQ9NRA1 345 aa17.35■□□□□ 0.37
DFFA-203ENST00000476658 V9GY48 417 aaPredicted RBP17.35■□□□□ 0.37
DFFA-203ENST00000476658 ALPK3Q96L96 1907 aa17.35■□□□□ 0.37
DFFA-203ENST00000476658 ADCY6O43306 1168 aa17.34■□□□□ 0.37
DFFA-203ENST00000476658 DUSP11O75319 330 aaKnown RBP17.34■□□□□ 0.37
DFFA-203ENST00000476658 EIF2AK2P19525 551 aaKnown RBP17.34■□□□□ 0.37
DFFA-203ENST00000476658 EDNRBP24530 442 aa17.34■□□□□ 0.37
DFFA-203ENST00000476658 PDIA3P30101 505 aaKnown RBP17.34■□□□□ 0.37
DFFA-203ENST00000476658 EVCP57679 992 aa17.34■□□□□ 0.37
DFFA-203ENST00000476658 CCT2P78371 535 aaKnown RBP17.34■□□□□ 0.37
DFFA-203ENST00000476658 TNFAIP2Q03169 654 aa17.34■□□□□ 0.37
DFFA-203ENST00000476658 FUT2Q10981 343 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms