RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 GRXCR1A8MXD5 290 aa15.46■□□□□ 0.07
MRPL55-228ENST00000476267 B4GALT4O60513 344 aa15.46■□□□□ 0.07
MRPL55-228ENST00000476267 ZNF543Q08ER8 600 aa15.46■□□□□ 0.07
MRPL55-228ENST00000476267 SLC30A10Q6XR72 485 aa15.46■□□□□ 0.07
MRPL55-228ENST00000476267 USP38Q8NB14 1042 aa15.46■□□□□ 0.07
MRPL55-228ENST00000476267 HERVK_113Q902F9 699 aa15.46■□□□□ 0.07
MRPL55-228ENST00000476267 TIFAQ96CG3 184 aa15.46■□□□□ 0.07
MRPL55-228ENST00000476267 NOC4LQ9BVI4 516 aaKnown RBP15.46■□□□□ 0.07
MRPL55-228ENST00000476267 AP5M1Q9H0R1 490 aa15.46■□□□□ 0.07
MRPL55-228ENST00000476267 WNT8AQ9H1J5 351 aa15.46■□□□□ 0.07
MRPL55-228ENST00000476267 CXXC1Q9P0U4 656 aaPredicted RBP15.46■□□□□ 0.07
MRPL55-228ENST00000476267 PCP11498 1178 aaKnown RBP15.45■□□□□ 0.06
MRPL55-228ENST00000476267 EDNRBP24530 442 aa15.45■□□□□ 0.06
MRPL55-228ENST00000476267 HAND2P61296 217 aa15.45■□□□□ 0.06
MRPL55-228ENST00000476267 PSMC6P62333 389 aa15.45■□□□□ 0.06
MRPL55-228ENST00000476267 RRP12Q5JTH9 1297 aaKnown RBP15.45■□□□□ 0.06
MRPL55-228ENST00000476267 AKNAD1Q5T1N1 836 aa15.45■□□□□ 0.06
MRPL55-228ENST00000476267 KIAA1211Q6ZU35 1233 aa15.45■□□□□ 0.06
MRPL55-228ENST00000476267 NOL8Q76FK4 1167 aaKnown RBP15.45■□□□□ 0.06
MRPL55-228ENST00000476267 SMC5Q8IY18 1101 aa15.45■□□□□ 0.06
MRPL55-228ENST00000476267 TTC14Q96N46 770 aa15.45■□□□□ 0.06
MRPL55-228ENST00000476267 TRPV6Q9H1D0 765 aa15.45■□□□□ 0.06
MRPL55-228ENST00000476267 HIPK3Q9H422 1215 aa15.45■□□□□ 0.06
MRPL55-228ENST00000476267 GPCPD1Q9NPB8 672 aa15.45■□□□□ 0.06
MRPL55-228ENST00000476267 ADD3Q9UEY8 706 aaKnown RBP15.45■□□□□ 0.06
MRPL55-228ENST00000476267 TANC1Q9C0D5 1861 aa15.45■□□□□ 0.06
MRPL55-228ENST00000476267 NEDD4P46934 1319 aa15.44■□□□□ 0.06
MRPL55-228ENST00000476267 WDR19Q8NEZ3 1342 aa15.44■□□□□ 0.06
MRPL55-228ENST00000476267 SCN10AQ9Y5Y9 1956 aa15.44■□□□□ 0.06
MRPL55-228ENST00000476267 LNPKQ9C0E8 428 aa15.44■□□□□ 0.06
MRPL55-228ENST00000476267 ALDH8A1Q9H2A2 487 aaPredicted RBP15.44■□□□□ 0.06
MRPL55-228ENST00000476267 OSBPL3Q9H4L5 887 aa15.44■□□□□ 0.06
MRPL55-228ENST00000476267 TOMM22Q9NS69 142 aa15.44■□□□□ 0.06
MRPL55-228ENST00000476267 ZBTB47Q9UFB7 747 aaPredicted RBP15.44■□□□□ 0.06
MRPL55-228ENST00000476267 ZEB2O60315 1214 aa15.43■□□□□ 0.06
MRPL55-228ENST00000476267 PURAQ00577 322 aaKnown RBP15.43■□□□□ 0.06
MRPL55-228ENST00000476267 MFSD6Q6ZSS7 791 aa15.43■□□□□ 0.06
MRPL55-228ENST00000476267 WDR11Q9BZH6 1224 aa15.43■□□□□ 0.06
MRPL55-228ENST00000476267 XIRP2A4UGR9 3374 aa15.43■□□□□ 0.06
MRPL55-228ENST00000476267 CUL9Q8IWT3 2517 aa15.42■□□□□ 0.06
MRPL55-228ENST00000476267 PTPDC1A2A3K4 754 aa15.42■□□□□ 0.06
MRPL55-228ENST00000476267 SDSP20132 328 aa15.42■□□□□ 0.06
MRPL55-228ENST00000476267 RPS6P62753 249 aaKnown RBP15.42■□□□□ 0.06
MRPL55-228ENST00000476267 RNF207Q6ZRF8 634 aa15.42■□□□□ 0.06
MRPL55-228ENST00000476267 PNMA2Q9UL42 364 aa15.42■□□□□ 0.06
MRPL55-228ENST00000476267 SCN5AQ14524 2016 aa15.41■□□□□ 0.06
MRPL55-228ENST00000476267 FGBP02675 491 aa15.41■□□□□ 0.06
MRPL55-228ENST00000476267 CALML3P27482 149 aa15.41■□□□□ 0.06
MRPL55-228ENST00000476267 CCL23P55773 120 aa15.41■□□□□ 0.06
MRPL55-228ENST00000476267 AAMPQ13685 434 aa15.41■□□□□ 0.06
MRPL55-228ENST00000476267 DGKHQ86XP1 1220 aa15.41■□□□□ 0.06
MRPL55-228ENST00000476267 PLEKHM2Q8IWE5 1019 aa15.41■□□□□ 0.06
MRPL55-228ENST00000476267 RGS22Q8NE09 1264 aa15.41■□□□□ 0.06
MRPL55-228ENST00000476267 DNERQ8NFT8 737 aa15.41■□□□□ 0.06
MRPL55-228ENST00000476267 ANKS1AQ92625 1134 aa15.41■□□□□ 0.06
MRPL55-228ENST00000476267 POLR3EQ9NVU0 708 aa15.41■□□□□ 0.06
MRPL55-228ENST00000476267 YBX2Q9Y2T7 364 aaKnown RBP15.41■□□□□ 0.06
MRPL55-228ENST00000476267 A6NJR5 290 aa15.4■□□□□ 0.06
MRPL55-228ENST00000476267 TRIM6-TRIM34B2RNG4 842 aa15.4■□□□□ 0.06
MRPL55-228ENST00000476267 NT5C2P49902 561 aa15.4■□□□□ 0.06
MRPL55-228ENST00000476267 CPT1AP50416 773 aa15.4■□□□□ 0.06
MRPL55-228ENST00000476267 ADGRE1Q14246 886 aa15.4■□□□□ 0.06
MRPL55-228ENST00000476267 RAB30Q15771 203 aa15.4■□□□□ 0.06
MRPL55-228ENST00000476267 GPATCH4Q5T3I0 446 aaKnown RBP15.4■□□□□ 0.06
MRPL55-228ENST00000476267 OTOP2Q7RTS6 562 aa15.4■□□□□ 0.06
MRPL55-228ENST00000476267 ESR2Q92731 530 aa15.4■□□□□ 0.06
MRPL55-228ENST00000476267 RILPL2Q969X0 211 aa15.4■□□□□ 0.06
MRPL55-228ENST00000476267 SCLYQ96I15 445 aa15.4■□□□□ 0.06
MRPL55-228ENST00000476267 ZKSCAN3Q9BRR0 538 aa15.4■□□□□ 0.06
MRPL55-228ENST00000476267 MAF1Q9H063 256 aa15.4■□□□□ 0.06
MRPL55-228ENST00000476267 CPVLQ9H3G5 476 aa15.4■□□□□ 0.06
MRPL55-228ENST00000476267 RNF41Q9H4P4 317 aaPredicted RBP15.4■□□□□ 0.06
MRPL55-228ENST00000476267 PRDM12Q9H4Q4 367 aa15.4■□□□□ 0.06
MRPL55-228ENST00000476267 TRMT13Q9NUP7 481 aaKnown RBP15.4■□□□□ 0.06
MRPL55-228ENST00000476267 KIAA1217Q5T5P2 1943 aa15.4■□□□□ 0.06
MRPL55-228ENST00000476267 TNKSO95271 1327 aa15.4■□□□□ 0.06
MRPL55-228ENST00000476267 TRANK1O15050 2925 aa15.39■□□□□ 0.05
MRPL55-228ENST00000476267 NKRFO15226 690 aaKnown RBP eCLIP15.39■□□□□ 0.05
MRPL55-228ENST00000476267 ARIH2O95376 493 aa15.39■□□□□ 0.05
MRPL55-228ENST00000476267 IGHDP01880 384 aa15.39■□□□□ 0.05
MRPL55-228ENST00000476267 GOLGA8HP0CJ92 632 aa15.39■□□□□ 0.05
MRPL55-228ENST00000476267 NUCB1Q02818 461 aa15.39■□□□□ 0.05
MRPL55-228ENST00000476267 CHD1LQ86WJ1 897 aa15.39■□□□□ 0.05
MRPL55-228ENST00000476267 OR6J1Q8NGC5 347 aa15.39■□□□□ 0.05
MRPL55-228ENST00000476267 SCFD2Q8WU76 684 aa15.39■□□□□ 0.05
MRPL55-228ENST00000476267 COPS5Q92905 334 aa15.39■□□□□ 0.05
MRPL55-228ENST00000476267 MTG1Q9BT17 334 aaPredicted RBP15.39■□□□□ 0.05
MRPL55-228ENST00000476267 PTPRSQ13332 1948 aa15.39■□□□□ 0.05
MRPL55-228ENST00000476267 ZNF213O14771 459 aa15.38■□□□□ 0.05
MRPL55-228ENST00000476267 CYP2C9P11712 490 aa15.38■□□□□ 0.05
MRPL55-228ENST00000476267 MFAP1P55081 439 aaKnown RBP15.38■□□□□ 0.05
MRPL55-228ENST00000476267 PDE4DQ08499 809 aa15.38■□□□□ 0.05
MRPL55-228ENST00000476267 PPP2R5BQ15173 497 aa15.38■□□□□ 0.05
MRPL55-228ENST00000476267 B4GALNT3Q6L9W6 998 aa15.38■□□□□ 0.05
MRPL55-228ENST00000476267 NFRKBQ6P4R8 1299 aa15.38■□□□□ 0.05
MRPL55-228ENST00000476267 CCDC62Q6P9F0 684 aa15.38■□□□□ 0.05
MRPL55-228ENST00000476267 PNMA1Q8ND90 353 aa15.38■□□□□ 0.05
MRPL55-228ENST00000476267 TBC1D5Q92609 795 aa15.38■□□□□ 0.05
MRPL55-228ENST00000476267 UBA5Q9GZZ9 404 aa15.38■□□□□ 0.05
MRPL55-228ENST00000476267 MTIF3Q9H2K0 278 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms