RNA–Protein interactions for RNA: ENST00000476234.5

EXOSC1-208, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-208ENST00000476234 CTDSPL2Q05D32 466 aa13.12□□□□□ -0.31
EXOSC1-208ENST00000476234 PPARAQ07869 468 aa13.12□□□□□ -0.31
EXOSC1-208ENST00000476234 PPP2R2DQ66LE6 453 aa13.12□□□□□ -0.31
EXOSC1-208ENST00000476234 SLFN13Q68D06 897 aa13.12□□□□□ -0.31
EXOSC1-208ENST00000476234 PLEKHM2Q8IWE5 1019 aa13.12□□□□□ -0.31
EXOSC1-208ENST00000476234 ZNF444Q8N0Y2 327 aaPredicted RBP13.12□□□□□ -0.31
EXOSC1-208ENST00000476234 LRRC47Q8N1G4 583 aaKnown RBP13.12□□□□□ -0.31
EXOSC1-208ENST00000476234 IL27Q8NEV9 243 aa13.12□□□□□ -0.31
EXOSC1-208ENST00000476234 NEDD1Q8NHV4 660 aa13.12□□□□□ -0.31
EXOSC1-208ENST00000476234 EVI5LQ96CN4 794 aa13.12□□□□□ -0.31
EXOSC1-208ENST00000476234 GMCL1Q96IK5 515 aa13.12□□□□□ -0.31
EXOSC1-208ENST00000476234 NECAB3Q96P71 396 aaPredicted RBP13.12□□□□□ -0.31
EXOSC1-208ENST00000476234 C1QTNF1Q9BXJ1 281 aa13.12□□□□□ -0.31
EXOSC1-208ENST00000476234 AP5M1Q9H0R1 490 aa13.12□□□□□ -0.31
EXOSC1-208ENST00000476234 ZNF287Q9HBT7 754 aa13.12□□□□□ -0.31
EXOSC1-208ENST00000476234 TSHZ2Q9NRE2 1034 aa13.12□□□□□ -0.31
EXOSC1-208ENST00000476234 RNF146Q9NTX7 359 aa13.12□□□□□ -0.31
EXOSC1-208ENST00000476234 TRANK1O15050 2925 aa13.11□□□□□ -0.31
EXOSC1-208ENST00000476234 DYNC1LI2O43237 492 aaPredicted RBP13.11□□□□□ -0.31
EXOSC1-208ENST00000476234 ZEB2O60315 1214 aa13.11□□□□□ -0.31
EXOSC1-208ENST00000476234 STAT2P52630 851 aa13.11□□□□□ -0.31
EXOSC1-208ENST00000476234 PSMC6P62333 389 aa13.11□□□□□ -0.31
EXOSC1-208ENST00000476234 AAK1Q2M2I8 961 aa13.11□□□□□ -0.31
EXOSC1-208ENST00000476234 TMEM63BQ5T3F8 832 aa13.11□□□□□ -0.31
EXOSC1-208ENST00000476234 NOL8Q76FK4 1167 aaKnown RBP13.11□□□□□ -0.31
EXOSC1-208ENST00000476234 ZNF589Q86UQ0 364 aaPredicted RBP13.11□□□□□ -0.31
EXOSC1-208ENST00000476234 FAM160B2Q86V87 743 aa13.11□□□□□ -0.31
EXOSC1-208ENST00000476234 CHURC1Q8WUH1 139 aa13.11□□□□□ -0.31
EXOSC1-208ENST00000476234 STAG1Q8WVM7 1258 aa13.11□□□□□ -0.31
EXOSC1-208ENST00000476234 FAM122AQ96E09 287 aa13.11□□□□□ -0.31
EXOSC1-208ENST00000476234 ALDH8A1Q9H2A2 487 aaPredicted RBP13.11□□□□□ -0.31
EXOSC1-208ENST00000476234 PDGFCQ9NRA1 345 aa13.11□□□□□ -0.31
EXOSC1-208ENST00000476234 HOMER2Q9NSB8 354 aa13.11□□□□□ -0.31
EXOSC1-208ENST00000476234 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.11□□□□□ -0.31
EXOSC1-208ENST00000476234 MTCH2Q9Y6C9 303 aa13.11□□□□□ -0.31
EXOSC1-208ENST00000476234 TMEM232C9JQI7 657 aa13.1□□□□□ -0.31
EXOSC1-208ENST00000476234 NMT2O60551 498 aa13.1□□□□□ -0.31
EXOSC1-208ENST00000476234 ATP2A2P16615 1042 aaKnown RBP13.1□□□□□ -0.31
EXOSC1-208ENST00000476234 KCNQ1P51787 676 aa13.1□□□□□ -0.31
EXOSC1-208ENST00000476234 NUCB1Q02818 461 aa13.1□□□□□ -0.31
EXOSC1-208ENST00000476234 TFF2Q03403 129 aa13.1□□□□□ -0.31
EXOSC1-208ENST00000476234 TTLL4Q14679 1199 aa13.1□□□□□ -0.31
EXOSC1-208ENST00000476234 RASGRP2Q7LDG7 609 aa13.1□□□□□ -0.31
EXOSC1-208ENST00000476234 CHD1LQ86WJ1 897 aa13.1□□□□□ -0.31
EXOSC1-208ENST00000476234 SCLYQ96I15 445 aa13.1□□□□□ -0.31
EXOSC1-208ENST00000476234 TRERF1Q96PN7 1200 aa13.1□□□□□ -0.31
EXOSC1-208ENST00000476234 NAPBQ9H115 298 aa13.1□□□□□ -0.31
EXOSC1-208ENST00000476234 VTA1Q9NP79 307 aa13.1□□□□□ -0.31
EXOSC1-208ENST00000476234 IL17RBQ9NRM6 502 aa13.1□□□□□ -0.31
EXOSC1-208ENST00000476234 CYP39A1Q9NYL5 469 aa13.1□□□□□ -0.31
EXOSC1-208ENST00000476234 LCTP09848 1927 aa13.09□□□□□ -0.31
EXOSC1-208ENST00000476234 SUPT20HL2P0C7V6 817 aa13.09□□□□□ -0.31
EXOSC1-208ENST00000476234 TFAP4Q01664 338 aa13.09□□□□□ -0.31
EXOSC1-208ENST00000476234 NMIQ13287 307 aaPredicted RBP13.09□□□□□ -0.31
EXOSC1-208ENST00000476234 LRRFIP1Q32MZ4 808 aaKnown RBP13.09□□□□□ -0.31
EXOSC1-208ENST00000476234 DUSP28Q4G0W2 176 aa13.09□□□□□ -0.31
EXOSC1-208ENST00000476234 CHMP4CQ96CF2 233 aa13.09□□□□□ -0.31
EXOSC1-208ENST00000476234 RWDD1Q9H446 243 aaPredicted RBP13.09□□□□□ -0.31
EXOSC1-208ENST00000476234 DDX49Q9Y6V7 483 aaKnown RBP13.09□□□□□ -0.31
EXOSC1-208ENST00000476234 LOC102724159A0A0B4J2E5 919 aa13.08□□□□□ -0.32
EXOSC1-208ENST00000476234 RBM47A0AV96 593 aaKnown RBP13.08□□□□□ -0.32
EXOSC1-208ENST00000476234 TLL1O43897 1013 aa13.08□□□□□ -0.32
EXOSC1-208ENST00000476234 FGAP02671 866 aa13.08□□□□□ -0.32
EXOSC1-208ENST00000476234 CA3P07451 260 aa13.08□□□□□ -0.32
EXOSC1-208ENST00000476234 PDE4AP27815 886 aa13.08□□□□□ -0.32
EXOSC1-208ENST00000476234 NOVP48745 357 aa13.08□□□□□ -0.32
EXOSC1-208ENST00000476234 PWP2Q15269 919 aaKnown RBP13.08□□□□□ -0.32
EXOSC1-208ENST00000476234 MUM1L1Q5H9M0 696 aa13.08□□□□□ -0.32
EXOSC1-208ENST00000476234 TMEM67Q5HYA8 995 aa13.08□□□□□ -0.32
EXOSC1-208ENST00000476234 RCSD1Q6JBY9 416 aa13.08□□□□□ -0.32
EXOSC1-208ENST00000476234 FBXO16Q8IX29 292 aaPredicted RBP13.08□□□□□ -0.32
EXOSC1-208ENST00000476234 PHOSPHO2Q8TCD6 241 aa13.08□□□□□ -0.32
EXOSC1-208ENST00000476234 NACAP1Q9BZK3 213 aa13.08□□□□□ -0.32
EXOSC1-208ENST00000476234 HELLSQ9NRZ9 838 aa13.08□□□□□ -0.32
EXOSC1-208ENST00000476234 TRMT13Q9NUP7 481 aaKnown RBP13.08□□□□□ -0.32
EXOSC1-208ENST00000476234 POLR3EQ9NVU0 708 aa13.08□□□□□ -0.32
EXOSC1-208ENST00000476234 COG5Q9UP83 839 aa13.08□□□□□ -0.32
EXOSC1-208ENST00000476234 TCF20Q9UGU0 1960 aaKnown RBP13.08□□□□□ -0.32
EXOSC1-208ENST00000476234 TNKSO95271 1327 aa13.08□□□□□ -0.32
EXOSC1-208ENST00000476234 EPOPA6NHQ4 379 aa13.07□□□□□ -0.32
EXOSC1-208ENST00000476234 ZBBXA8MT70 800 aa13.07□□□□□ -0.32
EXOSC1-208ENST00000476234 RFXAPO00287 272 aa13.07□□□□□ -0.32
EXOSC1-208ENST00000476234 FGRP09769 529 aa13.07□□□□□ -0.32
EXOSC1-208ENST00000476234 PRR29P0C7W0 189 aa13.07□□□□□ -0.32
EXOSC1-208ENST00000476234 TSPY3P0CV98 308 aa13.07□□□□□ -0.32
EXOSC1-208ENST00000476234 TSPY8P0CW00 308 aa13.07□□□□□ -0.32
EXOSC1-208ENST00000476234 HSPD1P10809 573 aaKnown RBP13.07□□□□□ -0.32
EXOSC1-208ENST00000476234 ALAS1P13196 640 aa13.07□□□□□ -0.32
EXOSC1-208ENST00000476234 MCCP23508 829 aa13.07□□□□□ -0.32
EXOSC1-208ENST00000476234 RFC2P35250 354 aa13.07□□□□□ -0.32
EXOSC1-208ENST00000476234 SLC1A4P43007 532 aa13.07□□□□□ -0.32
EXOSC1-208ENST00000476234 PURAQ00577 322 aaKnown RBP13.07□□□□□ -0.32
EXOSC1-208ENST00000476234 TAP1Q03518 808 aa13.07□□□□□ -0.32
EXOSC1-208ENST00000476234 ALX1Q15699 326 aa13.07□□□□□ -0.32
EXOSC1-208ENST00000476234 MCMDC2Q4G0Z9 681 aa13.07□□□□□ -0.32
EXOSC1-208ENST00000476234 KIAA1211Q6ZU35 1233 aa13.07□□□□□ -0.32
EXOSC1-208ENST00000476234 SLC9A7Q96T83 725 aa13.07□□□□□ -0.32
EXOSC1-208ENST00000476234 OSBPL3Q9H4L5 887 aa13.07□□□□□ -0.32
EXOSC1-208ENST00000476234 ZBTB47Q9UFB7 747 aaPredicted RBP13.07□□□□□ -0.32
EXOSC1-208ENST00000476234 ANAPC4Q9UJX5 808 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms