RNA–Protein interactions for RNA: ENST00000475663.2

NIPAL3-206, Transcript of NIPA like domain containing 3, humanhuman

TSL 3

Gene NIPAL3, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-206ENST00000475663 BEX3Q00994 111 aa15.29■□□□□ 0.04
NIPAL3-206ENST00000475663 EXOSC10Q01780 885 aaKnown RBP15.29■□□□□ 0.04
NIPAL3-206ENST00000475663 TAPT1Q6NXT6 567 aa15.29■□□□□ 0.04
NIPAL3-206ENST00000475663 CHRDL2Q6WN34 429 aa15.29■□□□□ 0.04
NIPAL3-206ENST00000475663 MICU3Q86XE3 530 aa15.29■□□□□ 0.04
NIPAL3-206ENST00000475663 CTCFLQ8NI51 663 aaPredicted RBP15.29■□□□□ 0.04
NIPAL3-206ENST00000475663 SYTL5Q8TDW5 730 aaPredicted RBP15.29■□□□□ 0.04
NIPAL3-206ENST00000475663 JAKMIP1Q96N16 626 aaKnown RBP15.29■□□□□ 0.04
NIPAL3-206ENST00000475663 AMNQ9BXJ7 453 aa15.29■□□□□ 0.04
NIPAL3-206ENST00000475663 COLQQ9Y215 455 aaPredicted RBP15.29■□□□□ 0.04
NIPAL3-206ENST00000475663 PCDHA1Q9Y5I3 950 aa15.29■□□□□ 0.04
NIPAL3-206ENST00000475663 FRMPD3Q5JV73 1810 aa15.29■□□□□ 0.04
NIPAL3-206ENST00000475663 C6orf222P0C671 652 aaPredicted RBP15.28■□□□□ 0.04
NIPAL3-206ENST00000475663 SMPD1P17405 629 aa15.28■□□□□ 0.04
NIPAL3-206ENST00000475663 HOXA13P31271 388 aaPredicted RBP15.28■□□□□ 0.04
NIPAL3-206ENST00000475663 HSPA4P34932 840 aa15.28■□□□□ 0.04
NIPAL3-206ENST00000475663 TNFAIP2Q03169 654 aa15.28■□□□□ 0.04
NIPAL3-206ENST00000475663 DHX32Q7L7V1 743 aaKnown RBP15.28■□□□□ 0.04
NIPAL3-206ENST00000475663 RNF180Q86T96 592 aa15.28■□□□□ 0.04
NIPAL3-206ENST00000475663 SRBD1Q8N5C6 995 aaKnown RBP15.28■□□□□ 0.04
NIPAL3-206ENST00000475663 ADD3Q9UEY8 706 aaKnown RBP15.28■□□□□ 0.04
NIPAL3-206ENST00000475663 PNMA2Q9UL42 364 aa15.28■□□□□ 0.04
NIPAL3-206ENST00000475663 BRPF3Q9ULD4 1205 aa15.28■□□□□ 0.04
NIPAL3-206ENST00000475663 ATP11BQ9Y2G3 1177 aa15.28■□□□□ 0.04
NIPAL3-206ENST00000475663 MRPL11Q9Y3B7 192 aaKnown RBP15.28■□□□□ 0.04
NIPAL3-206ENST00000475663 SLC12A7Q9Y666 1083 aa15.28■□□□□ 0.04
NIPAL3-206ENST00000475663 DUSP11O75319 330 aaKnown RBP15.27■□□□□ 0.04
NIPAL3-206ENST00000475663 LIFRP42702 1097 aa15.27■□□□□ 0.04
NIPAL3-206ENST00000475663 RTP1P59025 263 aa15.27■□□□□ 0.04
NIPAL3-206ENST00000475663 PDE4DQ08499 809 aa15.27■□□□□ 0.04
NIPAL3-206ENST00000475663 KCNA10Q16322 511 aa15.27■□□□□ 0.04
NIPAL3-206ENST00000475663 TSGA10IPQ3SY00 556 aa15.27■□□□□ 0.04
NIPAL3-206ENST00000475663 MORC4Q8TE76 937 aa15.27■□□□□ 0.04
NIPAL3-206ENST00000475663 ZFP91Q96JP5 570 aaPredicted RBP15.27■□□□□ 0.04
NIPAL3-206ENST00000475663 NAP1L2Q9ULW6 460 aaPredicted RBP15.27■□□□□ 0.04
NIPAL3-206ENST00000475663 MCM3APO60318 1980 aa15.27■□□□□ 0.03
NIPAL3-206ENST00000475663 LCTP09848 1927 aa15.27■□□□□ 0.03
NIPAL3-206ENST00000475663 ALPK3Q96L96 1907 aa15.26■□□□□ 0.03
NIPAL3-206ENST00000475663 PNMA6FA0A0J9YX94 578 aa15.26■□□□□ 0.03
NIPAL3-206ENST00000475663 A0A1W2PQ45 241 aaPredicted RBP15.26■□□□□ 0.03
NIPAL3-206ENST00000475663 A0A1W2PQY0 241 aa15.26■□□□□ 0.03
NIPAL3-206ENST00000475663 CTAGE5O15320 804 aa15.26■□□□□ 0.03
NIPAL3-206ENST00000475663 DYNC1LI2O43237 492 aaPredicted RBP15.26■□□□□ 0.03
NIPAL3-206ENST00000475663 REC8O95072 547 aa15.26■□□□□ 0.03
NIPAL3-206ENST00000475663 EIF2AK2P19525 551 aaKnown RBP15.26■□□□□ 0.03
NIPAL3-206ENST00000475663 KIF5BP33176 963 aa15.26■□□□□ 0.03
NIPAL3-206ENST00000475663 TRIM60Q495X7 471 aa15.26■□□□□ 0.03
NIPAL3-206ENST00000475663 SLC39A5Q6ZMH5 540 aa15.26■□□□□ 0.03
NIPAL3-206ENST00000475663 TMTC2Q8N394 836 aa15.26■□□□□ 0.03
NIPAL3-206ENST00000475663 RGS22Q8NE09 1264 aa15.26■□□□□ 0.03
NIPAL3-206ENST00000475663 KLHDC9Q8NEP7 349 aa15.26■□□□□ 0.03
NIPAL3-206ENST00000475663 COPS5Q92905 334 aa15.26■□□□□ 0.03
NIPAL3-206ENST00000475663 KCNB2Q92953 911 aa15.26■□□□□ 0.03
NIPAL3-206ENST00000475663 MTA3Q9BTC8 594 aa15.26■□□□□ 0.03
NIPAL3-206ENST00000475663 PHF24Q9UPV7 400 aa15.26■□□□□ 0.03
NIPAL3-206ENST00000475663 KLF18A0A0U1RQI7 1052 aa15.25■□□□□ 0.03
NIPAL3-206ENST00000475663 EDNRBP24530 442 aa15.25■□□□□ 0.03
NIPAL3-206ENST00000475663 ACLYP53396 1101 aa15.25■□□□□ 0.03
NIPAL3-206ENST00000475663 APOBRQ0VD83 1088 aa15.25■□□□□ 0.03
NIPAL3-206ENST00000475663 KRT32Q14532 448 aa15.25■□□□□ 0.03
NIPAL3-206ENST00000475663 GNASQ5JWF2 1037 aa15.25■□□□□ 0.03
NIPAL3-206ENST00000475663 CCSAPQ6IQ19 270 aaPredicted RBP15.25■□□□□ 0.03
NIPAL3-206ENST00000475663 APOA5Q6Q788 366 aa15.25■□□□□ 0.03
NIPAL3-206ENST00000475663 Q6ZUG5 572 aa15.25■□□□□ 0.03
NIPAL3-206ENST00000475663 TLK2Q86UE8 772 aa15.25■□□□□ 0.03
NIPAL3-206ENST00000475663 SGMS1Q86VZ5 419 aa15.25■□□□□ 0.03
NIPAL3-206ENST00000475663 FCHSD1Q86WN1 690 aa15.25■□□□□ 0.03
NIPAL3-206ENST00000475663 MCF2L2Q86YR7 1114 aa15.25■□□□□ 0.03
NIPAL3-206ENST00000475663 FANCBQ8NB91 859 aa15.25■□□□□ 0.03
NIPAL3-206ENST00000475663 RRP36Q96EU6 259 aaKnown RBP15.25■□□□□ 0.03
NIPAL3-206ENST00000475663 RMDN3Q96TC7 470 aa15.25■□□□□ 0.03
NIPAL3-206ENST00000475663 SPZ1Q9BXG8 430 aa15.25■□□□□ 0.03
NIPAL3-206ENST00000475663 VTA1Q9NP79 307 aa15.25■□□□□ 0.03
NIPAL3-206ENST00000475663 GNEQ9Y223 722 aaKnown RBP15.25■□□□□ 0.03
NIPAL3-206ENST00000475663 CEP290O15078 2479 aa15.24■□□□□ 0.03
NIPAL3-206ENST00000475663 ARIH2O95376 493 aa15.24■□□□□ 0.03
NIPAL3-206ENST00000475663 ASGR1P07306 291 aa15.24■□□□□ 0.03
NIPAL3-206ENST00000475663 CASTP20810 708 aaKnown RBP15.24■□□□□ 0.03
NIPAL3-206ENST00000475663 GJA9P57773 515 aa15.24■□□□□ 0.03
NIPAL3-206ENST00000475663 FGD1P98174 961 aa15.24■□□□□ 0.03
NIPAL3-206ENST00000475663 ARHGEF16Q5VV41 709 aa15.24■□□□□ 0.03
NIPAL3-206ENST00000475663 BLOC1S2Q6QNY1 142 aa15.24■□□□□ 0.03
NIPAL3-206ENST00000475663 SYNE3Q6ZMZ3 975 aa15.24■□□□□ 0.03
NIPAL3-206ENST00000475663 SEPT14Q6ZU15 432 aa15.24■□□□□ 0.03
NIPAL3-206ENST00000475663 DNERQ8NFT8 737 aa15.24■□□□□ 0.03
NIPAL3-206ENST00000475663 VTI1AQ96AJ9 217 aa15.24■□□□□ 0.03
NIPAL3-206ENST00000475663 MAP3K14Q99558 947 aa15.24■□□□□ 0.03
NIPAL3-206ENST00000475663 LARP6Q9BRS8 491 aaKnown RBP15.24■□□□□ 0.03
NIPAL3-206ENST00000475663 USP26Q9BXU7 913 aa15.24■□□□□ 0.03
NIPAL3-206ENST00000475663 WDR11Q9BZH6 1224 aa15.24■□□□□ 0.03
NIPAL3-206ENST00000475663 UPF3AQ9H1J1 476 aaKnown RBP15.24■□□□□ 0.03
NIPAL3-206ENST00000475663 RBM27Q9P2N5 1060 aaKnown RBP15.24■□□□□ 0.03
NIPAL3-206ENST00000475663 BAZ2BQ9UIF8 2168 aaKnown RBP15.24■□□□□ 0.03
NIPAL3-206ENST00000475663 GOLGA8AA7E2F4 631 aa15.23■□□□□ 0.03
NIPAL3-206ENST00000475663 GOLGA8BA8MQT2 603 aa15.23■□□□□ 0.03
NIPAL3-206ENST00000475663 SORBS3O60504 671 aa15.23■□□□□ 0.03
NIPAL3-206ENST00000475663 MYCLP12524 364 aaPredicted RBP15.23■□□□□ 0.03
NIPAL3-206ENST00000475663 HSD17B4P51659 736 aa15.23■□□□□ 0.03
NIPAL3-206ENST00000475663 MDM2Q00987 491 aaPredicted RBP15.23■□□□□ 0.03
NIPAL3-206ENST00000475663 IQSEC1Q6DN90 963 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms