RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 BAATQ14032 418 aaPredicted RBP14.65□□□□□ -0.06
CCDC57-208ENST00000475635 RAB30Q15771 203 aa14.65□□□□□ -0.06
CCDC57-208ENST00000475635 RRP12Q5JTH9 1297 aaKnown RBP14.65□□□□□ -0.06
CCDC57-208ENST00000475635 ANKRD45Q5TZF3 282 aa14.65□□□□□ -0.06
CCDC57-208ENST00000475635 SYDE2Q5VT97 1194 aa14.65□□□□□ -0.06
CCDC57-208ENST00000475635 BTNL9Q6UXG8 535 aa14.65□□□□□ -0.06
CCDC57-208ENST00000475635 OTOP2Q7RTS6 562 aa14.65□□□□□ -0.06
CCDC57-208ENST00000475635 PPM1EQ8WY54 764 aa14.65□□□□□ -0.06
CCDC57-208ENST00000475635 TMEM47Q9BQJ4 181 aa14.65□□□□□ -0.06
CCDC57-208ENST00000475635 NOC4LQ9BVI4 516 aaKnown RBP14.65□□□□□ -0.06
CCDC57-208ENST00000475635 PRDM6Q9NQX0 595 aa14.65□□□□□ -0.06
CCDC57-208ENST00000475635 HELLSQ9NRZ9 838 aa14.65□□□□□ -0.06
CCDC57-208ENST00000475635 ADD3Q9UEY8 706 aaKnown RBP14.65□□□□□ -0.06
CCDC57-208ENST00000475635 MSRAQ9UJ68 235 aa14.65□□□□□ -0.06
CCDC57-208ENST00000475635 FRMPD2Q68DX3 1309 aaPredicted RBP14.65□□□□□ -0.06
CCDC57-208ENST00000475635 PTPDC1A2A3K4 754 aa14.64□□□□□ -0.07
CCDC57-208ENST00000475635 NFIBO00712 420 aa14.64□□□□□ -0.07
CCDC57-208ENST00000475635 TOP1P11387 765 aaKnown RBP14.64□□□□□ -0.07
CCDC57-208ENST00000475635 ALDH5A1P51649 535 aaPredicted RBP14.64□□□□□ -0.07
CCDC57-208ENST00000475635 ALX1Q15699 326 aa14.64□□□□□ -0.07
CCDC57-208ENST00000475635 DUSP28Q4G0W2 176 aa14.64□□□□□ -0.07
CCDC57-208ENST00000475635 TJAP1Q5JTD0 557 aa14.64□□□□□ -0.07
CCDC57-208ENST00000475635 WNT8AQ9H1J5 351 aa14.64□□□□□ -0.07
CCDC57-208ENST00000475635 NKX2-4Q9H2Z4 354 aa14.64□□□□□ -0.07
CCDC57-208ENST00000475635 GPCPD1Q9NPB8 672 aa14.64□□□□□ -0.07
CCDC57-208ENST00000475635 PTPRSQ13332 1948 aa14.63□□□□□ -0.07
CCDC57-208ENST00000475635 FGAP02671 866 aa14.63□□□□□ -0.07
CCDC57-208ENST00000475635 CALML3P27482 149 aa14.63□□□□□ -0.07
CCDC57-208ENST00000475635 MCMDC2Q4G0Z9 681 aa14.63□□□□□ -0.07
CCDC57-208ENST00000475635 AKNAD1Q5T1N1 836 aa14.63□□□□□ -0.07
CCDC57-208ENST00000475635 SLC30A10Q6XR72 485 aa14.63□□□□□ -0.07
CCDC57-208ENST00000475635 FAM227BQ96M60 508 aa14.63□□□□□ -0.07
CCDC57-208ENST00000475635 WDR11Q9BZH6 1224 aa14.63□□□□□ -0.07
CCDC57-208ENST00000475635 ALDH8A1Q9H2A2 487 aaPredicted RBP14.63□□□□□ -0.07
CCDC57-208ENST00000475635 TCP11L1Q9NUJ3 509 aa14.63□□□□□ -0.07
CCDC57-208ENST00000475635 TRMT13Q9NUP7 481 aaKnown RBP14.63□□□□□ -0.07
CCDC57-208ENST00000475635 TRANK1O15050 2925 aa14.63□□□□□ -0.07
CCDC57-208ENST00000475635 LOC102724159A0A0B4J2E5 919 aa14.62□□□□□ -0.07
CCDC57-208ENST00000475635 A0A0D9SFI3 127 aa14.62□□□□□ -0.07
CCDC57-208ENST00000475635 PDHBP11177 359 aa14.62□□□□□ -0.07
CCDC57-208ENST00000475635 CPT1AP50416 773 aa14.62□□□□□ -0.07
CCDC57-208ENST00000475635 PDE1AP54750 535 aa14.62□□□□□ -0.07
CCDC57-208ENST00000475635 PURAQ00577 322 aaKnown RBP14.62□□□□□ -0.07
CCDC57-208ENST00000475635 ADGRE1Q14246 886 aa14.62□□□□□ -0.07
CCDC57-208ENST00000475635 PWP2Q15269 919 aaKnown RBP14.62□□□□□ -0.07
CCDC57-208ENST00000475635 RNF207Q6ZRF8 634 aa14.62□□□□□ -0.07
CCDC57-208ENST00000475635 RPUSD2Q8IZ73 545 aaKnown RBP14.62□□□□□ -0.07
CCDC57-208ENST00000475635 CLEC4DQ8WXI8 215 aa14.62□□□□□ -0.07
CCDC57-208ENST00000475635 SCLYQ96I15 445 aa14.62□□□□□ -0.07
CCDC57-208ENST00000475635 SLC28A3Q9HAS3 691 aa14.62□□□□□ -0.07
CCDC57-208ENST00000475635 POLR3EQ9NVU0 708 aa14.62□□□□□ -0.07
CCDC57-208ENST00000475635 YBX2Q9Y2T7 364 aaKnown RBP14.62□□□□□ -0.07
CCDC57-208ENST00000475635 RBM47A0AV96 593 aaKnown RBP14.61□□□□□ -0.07
CCDC57-208ENST00000475635 MYL3P08590 195 aa14.61□□□□□ -0.07
CCDC57-208ENST00000475635 HSPD1P10809 573 aaKnown RBP14.61□□□□□ -0.07
CCDC57-208ENST00000475635 CYP2C9P11712 490 aa14.61□□□□□ -0.07
CCDC57-208ENST00000475635 IGFBP4P22692 258 aa14.61□□□□□ -0.07
CCDC57-208ENST00000475635 RABGGTBP53611 331 aa14.61□□□□□ -0.07
CCDC57-208ENST00000475635 HAND2P61296 217 aa14.61□□□□□ -0.07
CCDC57-208ENST00000475635 CCDC85BQ15834 202 aaPredicted RBP14.61□□□□□ -0.07
CCDC57-208ENST00000475635 OR6J1Q8NGC5 347 aa14.61□□□□□ -0.07
CCDC57-208ENST00000475635 PNMA2Q9UL42 364 aa14.61□□□□□ -0.07
CCDC57-208ENST00000475635 SLC4A7Q9Y6M7 1214 aa14.61□□□□□ -0.07
CCDC57-208ENST00000475635 TNKSO95271 1327 aa14.61□□□□□ -0.07
CCDC57-208ENST00000475635 ZMYM6O95789 1325 aa14.61□□□□□ -0.07
CCDC57-208ENST00000475635 ZBBXA8MT70 800 aa14.6□□□□□ -0.07
CCDC57-208ENST00000475635 SUPT20HL2P0C7V6 817 aa14.6□□□□□ -0.07
CCDC57-208ENST00000475635 RRP1P56182 461 aaKnown RBP14.6□□□□□ -0.07
CCDC57-208ENST00000475635 RPS6P62753 249 aaKnown RBP14.6□□□□□ -0.07
CCDC57-208ENST00000475635 ZNF543Q08ER8 600 aa14.6□□□□□ -0.07
CCDC57-208ENST00000475635 ZNF589Q86UQ0 364 aaPredicted RBP14.6□□□□□ -0.07
CCDC57-208ENST00000475635 ATXN2LQ8WWM7 1075 aaKnown RBP14.6□□□□□ -0.07
CCDC57-208ENST00000475635 VWCEQ96DN2 955 aa14.6□□□□□ -0.07
CCDC57-208ENST00000475635 MTG1Q9BT17 334 aaPredicted RBP14.6□□□□□ -0.07
CCDC57-208ENST00000475635 GPHNQ9NQX3 736 aaPredicted RBP14.6□□□□□ -0.07
CCDC57-208ENST00000475635 THEGQ9P2T0 379 aa14.6□□□□□ -0.07
CCDC57-208ENST00000475635 BRWD1Q9NSI6 2320 aa14.6□□□□□ -0.07
CCDC57-208ENST00000475635 BAZ2BQ9UIF8 2168 aaKnown RBP14.59□□□□□ -0.07
CCDC57-208ENST00000475635 TNFRSF10AO00220 468 aa14.59□□□□□ -0.07
CCDC57-208ENST00000475635 PFKMP08237 780 aa14.59□□□□□ -0.07
CCDC57-208ENST00000475635 MYOGP15173 224 aa14.59□□□□□ -0.07
CCDC57-208ENST00000475635 PDE4DQ08499 809 aa14.59□□□□□ -0.07
CCDC57-208ENST00000475635 NMIQ13287 307 aaPredicted RBP14.59□□□□□ -0.07
CCDC57-208ENST00000475635 PPP2R5BQ15173 497 aa14.59□□□□□ -0.07
CCDC57-208ENST00000475635 BRDTQ58F21 947 aaPredicted RBP14.59□□□□□ -0.07
CCDC57-208ENST00000475635 PPP2R2DQ66LE6 453 aa14.59□□□□□ -0.07
CCDC57-208ENST00000475635 MFSD6Q6ZSS7 791 aa14.59□□□□□ -0.07
CCDC57-208ENST00000475635 TTC14Q96N46 770 aa14.59□□□□□ -0.07
CCDC57-208ENST00000475635 CRBNQ96SW2 442 aa14.59□□□□□ -0.07
CCDC57-208ENST00000475635 MPHOSPH6Q99547 160 aaKnown RBP14.59□□□□□ -0.07
CCDC57-208ENST00000475635 XIRP2A4UGR9 3374 aa14.59□□□□□ -0.07
CCDC57-208ENST00000475635 CCDC171Q6TFL3 1326 aa14.59□□□□□ -0.07
CCDC57-208ENST00000475635 WDR19Q8NEZ3 1342 aa14.59□□□□□ -0.07
CCDC57-208ENST00000475635 RAD50Q92878 1312 aa14.59□□□□□ -0.07
CCDC57-208ENST00000475635 BDP1A6H8Y1 2624 aa14.59□□□□□ -0.07
CCDC57-208ENST00000475635 TRIM6-TRIM34B2RNG4 842 aa14.58□□□□□ -0.08
CCDC57-208ENST00000475635 NKRFO15226 690 aaKnown RBP eCLIP14.58□□□□□ -0.08
CCDC57-208ENST00000475635 SNHG28P0DPA3 235 aa14.58□□□□□ -0.08
CCDC57-208ENST00000475635 PCP11498 1178 aaKnown RBP14.58□□□□□ -0.08
CCDC57-208ENST00000475635 ATP2A2P16615 1042 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms