RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 F13A1P00488 732 aa8.07□□□□□ -1.12
SHQ1-207ENST00000475558 EEF2P13639 858 aaKnown RBP8.07□□□□□ -1.12
SHQ1-207ENST00000475558 SYN1P17600 705 aa8.07□□□□□ -1.12
SHQ1-207ENST00000475558 CDC27P30260 824 aa8.07□□□□□ -1.12
SHQ1-207ENST00000475558 SLC1A4P43007 532 aa8.07□□□□□ -1.12
SHQ1-207ENST00000475558 MAGEA10P43363 369 aaPredicted RBP8.07□□□□□ -1.12
SHQ1-207ENST00000475558 PSEN2P49810 448 aa8.07□□□□□ -1.12
SHQ1-207ENST00000475558 KLRC3Q07444 240 aa8.07□□□□□ -1.12
SHQ1-207ENST00000475558 SPP2Q13103 211 aa8.07□□□□□ -1.12
SHQ1-207ENST00000475558 GNL2Q13823 731 aaKnown RBP8.07□□□□□ -1.12
SHQ1-207ENST00000475558 TREML2Q5T2D2 321 aa8.07□□□□□ -1.12
SHQ1-207ENST00000475558 SLFN13Q68D06 897 aa8.07□□□□□ -1.12
SHQ1-207ENST00000475558 Q7L0L9 218 aa8.07□□□□□ -1.12
SHQ1-207ENST00000475558 FAM160B2Q86V87 743 aa8.07□□□□□ -1.12
SHQ1-207ENST00000475558 SAMD3Q8N6K7 520 aa8.07□□□□□ -1.12
SHQ1-207ENST00000475558 ZNF280CQ8ND82 737 aa8.07□□□□□ -1.12
SHQ1-207ENST00000475558 CCDC148Q8NFR7 591 aa8.07□□□□□ -1.12
SHQ1-207ENST00000475558 PTCD2Q8WV60 388 aaKnown RBP8.07□□□□□ -1.12
SHQ1-207ENST00000475558 DDX11Q96FC9 970 aa8.07□□□□□ -1.12
SHQ1-207ENST00000475558 WDR18Q9BV38 432 aa8.07□□□□□ -1.12
SHQ1-207ENST00000475558 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.07□□□□□ -1.12
SHQ1-207ENST00000475558 UBE2OQ9C0C9 1292 aaKnown RBP8.07□□□□□ -1.12
SHQ1-207ENST00000475558 FOXP1Q9H334 677 aaPredicted RBP8.07□□□□□ -1.12
SHQ1-207ENST00000475558 RIOX1Q9H6W3 641 aa8.07□□□□□ -1.12
SHQ1-207ENST00000475558 NCOA5Q9HCD5 579 aaKnown RBP8.07□□□□□ -1.12
SHQ1-207ENST00000475558 GPHNQ9NQX3 736 aaPredicted RBP8.07□□□□□ -1.12
SHQ1-207ENST00000475558 OGDHLQ9ULD0 1010 aa8.07□□□□□ -1.12
SHQ1-207ENST00000475558 MTMR6Q9Y217 621 aa8.07□□□□□ -1.12
SHQ1-207ENST00000475558 PHIPQ8WWQ0 1821 aa8.07□□□□□ -1.12
SHQ1-207ENST00000475558 PNMA6FA0A0J9YX94 578 aa8.06□□□□□ -1.12
SHQ1-207ENST00000475558 USP17L10C9JJH3 530 aa8.06□□□□□ -1.12
SHQ1-207ENST00000475558 NMT2O60551 498 aa8.06□□□□□ -1.12
SHQ1-207ENST00000475558 BMP15O95972 392 aa8.06□□□□□ -1.12
SHQ1-207ENST00000475558 GH2P01242 217 aa8.06□□□□□ -1.12
SHQ1-207ENST00000475558 PDHBP11177 359 aa8.06□□□□□ -1.12
SHQ1-207ENST00000475558 BMP3P12645 472 aa8.06□□□□□ -1.12
SHQ1-207ENST00000475558 XRCC5P13010 732 aaKnown RBP8.06□□□□□ -1.12
SHQ1-207ENST00000475558 SCG2P13521 617 aa8.06□□□□□ -1.12
SHQ1-207ENST00000475558 FDPSP14324 419 aaKnown RBP8.06□□□□□ -1.12
SHQ1-207ENST00000475558 KRT85P78386 507 aa8.06□□□□□ -1.12
SHQ1-207ENST00000475558 ATP2B2Q01814 1243 aa8.06□□□□□ -1.12
SHQ1-207ENST00000475558 ZNF543Q08ER8 600 aa8.06□□□□□ -1.12
SHQ1-207ENST00000475558 SEPT2Q15019 361 aa8.06□□□□□ -1.12
SHQ1-207ENST00000475558 PFKFB3Q16875 520 aaPredicted RBP8.06□□□□□ -1.12
SHQ1-207ENST00000475558 SH3D19Q5HYK7 790 aa8.06□□□□□ -1.12
SHQ1-207ENST00000475558 BTNL9Q6UXG8 535 aa8.06□□□□□ -1.12
SHQ1-207ENST00000475558 CCDC84Q86UT8 332 aaPredicted RBP8.06□□□□□ -1.12
SHQ1-207ENST00000475558 TRMT44Q8IYL2 757 aaKnown RBP8.06□□□□□ -1.12
SHQ1-207ENST00000475558 KIAA1683Q9H0B3 1180 aa8.06□□□□□ -1.12
SHQ1-207ENST00000475558 ASCC2Q9H1I8 757 aaPredicted RBP8.06□□□□□ -1.12
SHQ1-207ENST00000475558 MORF4L1Q9UBU8 362 aa8.06□□□□□ -1.12
SHQ1-207ENST00000475558 MAD2L2Q9UI95 211 aa8.06□□□□□ -1.12
SHQ1-207ENST00000475558 FEM1BQ9UK73 627 aa8.06□□□□□ -1.12
SHQ1-207ENST00000475558 ZBTB21Q9ULJ3 1066 aa8.06□□□□□ -1.12
SHQ1-207ENST00000475558 CEP131Q9UPN4 1083 aa8.06□□□□□ -1.12
SHQ1-207ENST00000475558 MAST2Q6P0Q8 1798 aa8.05□□□□□ -1.12
SHQ1-207ENST00000475558 VPS37CA5D8V6 355 aaPredicted RBP8.05□□□□□ -1.12
SHQ1-207ENST00000475558 JAK2O60674 1132 aa8.05□□□□□ -1.12
SHQ1-207ENST00000475558 BAG4O95429 457 aaKnown RBP8.05□□□□□ -1.12
SHQ1-207ENST00000475558 SLURP2P0DP57 97 aa8.05□□□□□ -1.12
SHQ1-207ENST00000475558 U2AF2P26368 475 aaKnown RBP eCLIP8.05□□□□□ -1.12
SHQ1-207ENST00000475558 MCM4P33991 863 aa8.05□□□□□ -1.12
SHQ1-207ENST00000475558 TRAPPC10P48553 1259 aa8.05□□□□□ -1.12
SHQ1-207ENST00000475558 MRPL12P52815 198 aaKnown RBP8.05□□□□□ -1.12
SHQ1-207ENST00000475558 HMGCS2P54868 508 aa8.05□□□□□ -1.12
SHQ1-207ENST00000475558 FUT2Q10981 343 aa8.05□□□□□ -1.12
SHQ1-207ENST00000475558 ST3GAL1Q11201 340 aa8.05□□□□□ -1.12
SHQ1-207ENST00000475558 TRIM32Q13049 653 aa8.05□□□□□ -1.12
SHQ1-207ENST00000475558 RILPL1Q5EBL4 403 aa8.05□□□□□ -1.12
SHQ1-207ENST00000475558 MAP3K21Q5TCX8 1036 aa8.05□□□□□ -1.12
SHQ1-207ENST00000475558 DMRTA1Q5VZB9 504 aa8.05□□□□□ -1.12
SHQ1-207ENST00000475558 FAM109BQ6ICB4 259 aaPredicted RBP8.05□□□□□ -1.12
SHQ1-207ENST00000475558 PPP1R18Q6NYC8 613 aa8.05□□□□□ -1.12
SHQ1-207ENST00000475558 USP17L2Q6R6M4 530 aa8.05□□□□□ -1.12
SHQ1-207ENST00000475558 PLPP6Q8IY26 295 aa8.05□□□□□ -1.12
SHQ1-207ENST00000475558 SRBD1Q8N5C6 995 aaKnown RBP8.05□□□□□ -1.12
SHQ1-207ENST00000475558 SOCS4Q8WXH5 440 aa8.05□□□□□ -1.12
SHQ1-207ENST00000475558 TRIB2Q92519 343 aa8.05□□□□□ -1.12
SHQ1-207ENST00000475558 KCTD12Q96CX2 325 aaKnown RBP8.05□□□□□ -1.12
SHQ1-207ENST00000475558 NUDT12Q9BQG2 462 aa8.05□□□□□ -1.12
SHQ1-207ENST00000475558 DNAJC18Q9H819 358 aa8.05□□□□□ -1.12
SHQ1-207ENST00000475558 VCPKMTQ9H867 229 aa8.05□□□□□ -1.12
SHQ1-207ENST00000475558 SENP2Q9HC62 589 aa8.05□□□□□ -1.12
SHQ1-207ENST00000475558 C6orf50Q9HD87 102 aa8.05□□□□□ -1.12
SHQ1-207ENST00000475558 HOXC10Q9NYD6 342 aa8.05□□□□□ -1.12
SHQ1-207ENST00000475558 MAP3K20Q9NYL2 800 aaKnown RBP8.05□□□□□ -1.12
SHQ1-207ENST00000475558 DDX60LQ5H9U9 1706 aaKnown RBP8.04□□□□□ -1.12
SHQ1-207ENST00000475558 MYH7P12883 1935 aa8.04□□□□□ -1.12
SHQ1-207ENST00000475558 ESYT2A0FGR8 921 aa8.04□□□□□ -1.12
SHQ1-207ENST00000475558 GOLGA6L4A6NEF3 574 aa8.04□□□□□ -1.12
SHQ1-207ENST00000475558 SMIM22K7EJ46 135 aa8.04□□□□□ -1.12
SHQ1-207ENST00000475558 TULP1O00294 542 aaPredicted RBP8.04□□□□□ -1.12
SHQ1-207ENST00000475558 ZBTB5O15062 677 aa8.04□□□□□ -1.12
SHQ1-207ENST00000475558 WDR46O15213 610 aaKnown RBP8.04□□□□□ -1.12
SHQ1-207ENST00000475558 MMP1P03956 469 aa8.04□□□□□ -1.12
SHQ1-207ENST00000475558 COL6A1P12109 1028 aa8.04□□□□□ -1.12
SHQ1-207ENST00000475558 CYP2B6P20813 491 aa8.04□□□□□ -1.12
SHQ1-207ENST00000475558 HOXA7P31268 230 aaPredicted RBP8.04□□□□□ -1.12
SHQ1-207ENST00000475558 GUCY1A2P33402 732 aa8.04□□□□□ -1.12
SHQ1-207ENST00000475558 NLRP5P59047 1200 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms