RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 VSTM4Q8IW00 320 aa17.31■□□□□ 0.36
RPUSD3-215ENST00000475470 SPICE1Q8N0Z3 855 aa17.31■□□□□ 0.36
RPUSD3-215ENST00000475470 DDX25Q9UHL0 483 aaKnown RBP17.31■□□□□ 0.36
RPUSD3-215ENST00000475470 CTNND2Q9UQB3 1225 aa17.31■□□□□ 0.36
RPUSD3-215ENST00000475470 ECE1P42892 770 aa17.3■□□□□ 0.36
RPUSD3-215ENST00000475470 CCZ1BP86790 482 aa17.3■□□□□ 0.36
RPUSD3-215ENST00000475470 CCZ1P86791 482 aaPredicted RBP17.3■□□□□ 0.36
RPUSD3-215ENST00000475470 TPD52L1Q16890 204 aaPredicted RBP17.3■□□□□ 0.36
RPUSD3-215ENST00000475470 FBXO11Q86XK2 927 aa17.3■□□□□ 0.36
RPUSD3-215ENST00000475470 NAP1L4Q99733 375 aaKnown RBP17.3■□□□□ 0.36
RPUSD3-215ENST00000475470 MARCH6O60337 910 aa17.3■□□□□ 0.36
RPUSD3-215ENST00000475470 GCFC2P16383 781 aaKnown RBP17.3■□□□□ 0.36
RPUSD3-215ENST00000475470 ARMCX5Q6P1M9 558 aa17.3■□□□□ 0.36
RPUSD3-215ENST00000475470 MIGA2Q7L4E1 593 aa17.3■□□□□ 0.36
RPUSD3-215ENST00000475470 ZBTB21Q9ULJ3 1066 aa17.3■□□□□ 0.36
RPUSD3-215ENST00000475470 WNT10BO00744 389 aa17.29■□□□□ 0.36
RPUSD3-215ENST00000475470 TBC1D12O60347 775 aa17.29■□□□□ 0.36
RPUSD3-215ENST00000475470 PDIA5Q14554 519 aa17.29■□□□□ 0.36
RPUSD3-215ENST00000475470 TNIP1Q15025 636 aa17.29■□□□□ 0.36
RPUSD3-215ENST00000475470 BTNL9Q6UXG8 535 aa17.29■□□□□ 0.36
RPUSD3-215ENST00000475470 MMTAG2Q9BU76 263 aaKnown RBP17.29■□□□□ 0.36
RPUSD3-215ENST00000475470 GOPCQ9HD26 462 aa17.29■□□□□ 0.36
RPUSD3-215ENST00000475470 MYOZ2Q9NPC6 264 aa17.29■□□□□ 0.36
RPUSD3-215ENST00000475470 TMX2Q9Y320 296 aa17.29■□□□□ 0.36
RPUSD3-215ENST00000475470 NRDCO43847 1150 aa17.29■□□□□ 0.36
RPUSD3-215ENST00000475470 KCNB1Q14721 858 aa17.29■□□□□ 0.36
RPUSD3-215ENST00000475470 NBPF9Q3BBW0 867 aa17.29■□□□□ 0.36
RPUSD3-215ENST00000475470 USH1GQ495M9 461 aa17.29■□□□□ 0.36
RPUSD3-215ENST00000475470 KMT5BQ4FZB7 885 aa17.29■□□□□ 0.36
RPUSD3-215ENST00000475470 CDAN1Q8IWY9 1227 aa17.29■□□□□ 0.36
RPUSD3-215ENST00000475470 ACER1Q8TDN7 264 aa17.29■□□□□ 0.36
RPUSD3-215ENST00000475470 LRRC15Q8TF66 581 aa17.29■□□□□ 0.36
RPUSD3-215ENST00000475470 INTS13Q9NVM9 706 aa17.29■□□□□ 0.36
RPUSD3-215ENST00000475470 RWDD2AQ9UIY3 292 aa17.29■□□□□ 0.36
RPUSD3-215ENST00000475470 AMPD3Q01432 767 aa17.28■□□□□ 0.36
RPUSD3-215ENST00000475470 PAK1Q13153 545 aa17.28■□□□□ 0.36
RPUSD3-215ENST00000475470 ZBED3Q96IU2 234 aaPredicted RBP17.28■□□□□ 0.36
RPUSD3-215ENST00000475470 CDK5RAP3Q96JB5 506 aa17.28■□□□□ 0.36
RPUSD3-215ENST00000475470 GDAQ9Y2T3 454 aa17.28■□□□□ 0.36
RPUSD3-215ENST00000475470 STAT2P52630 851 aa17.28■□□□□ 0.36
RPUSD3-215ENST00000475470 TERF1P54274 439 aa17.28■□□□□ 0.36
RPUSD3-215ENST00000475470 SEMA3FQ13275 785 aa17.28■□□□□ 0.36
RPUSD3-215ENST00000475470 AP3B2Q13367 1082 aa17.28■□□□□ 0.36
RPUSD3-215ENST00000475470 NELFBQ8WX92 580 aa17.28■□□□□ 0.36
RPUSD3-215ENST00000475470 CCDC47Q96A33 483 aaKnown RBP17.28■□□□□ 0.36
RPUSD3-215ENST00000475470 ANO3Q9BYT9 981 aa17.28■□□□□ 0.36
RPUSD3-215ENST00000475470 PRR12Q9ULL5 1215 aa17.28■□□□□ 0.36
RPUSD3-215ENST00000475470 MYH7BA7E2Y1 1941 aa17.28■□□□□ 0.36
RPUSD3-215ENST00000475470 MEIS2O14770 477 aa17.27■□□□□ 0.36
RPUSD3-215ENST00000475470 KLRC4O43908 158 aa17.27■□□□□ 0.36
RPUSD3-215ENST00000475470 PRCPP42785 496 aa17.27■□□□□ 0.36
RPUSD3-215ENST00000475470 USP11P51784 963 aa17.27■□□□□ 0.36
RPUSD3-215ENST00000475470 CDKAL1Q5VV42 579 aa17.27■□□□□ 0.36
RPUSD3-215ENST00000475470 KRT79Q5XKE5 535 aa17.27■□□□□ 0.36
RPUSD3-215ENST00000475470 MCTP2Q6DN12 878 aa17.27■□□□□ 0.36
RPUSD3-215ENST00000475470 MAPK8IP1Q9UQF2 711 aa17.27■□□□□ 0.36
RPUSD3-215ENST00000475470 FER1L6Q2WGJ9 1857 aa17.27■□□□□ 0.35
RPUSD3-215ENST00000475470 SHTN1A0MZ66 631 aa17.27■□□□□ 0.35
RPUSD3-215ENST00000475470 POTEMA6NI47 508 aa17.27■□□□□ 0.35
RPUSD3-215ENST00000475470 NFKBIEO00221 500 aa17.27■□□□□ 0.35
RPUSD3-215ENST00000475470 PTPN21Q16825 1174 aa17.27■□□□□ 0.35
RPUSD3-215ENST00000475470 BCS1LQ9Y276 419 aa17.27■□□□□ 0.35
RPUSD3-215ENST00000475470 COBLO75128 1261 aa17.26■□□□□ 0.35
RPUSD3-215ENST00000475470 RHOBTB3O94955 611 aa17.26■□□□□ 0.35
RPUSD3-215ENST00000475470 CAP2P40123 477 aa17.26■□□□□ 0.35
RPUSD3-215ENST00000475470 STIM1Q13586 685 aa17.26■□□□□ 0.35
RPUSD3-215ENST00000475470 FAM83BQ5T0W9 1011 aa17.26■□□□□ 0.35
RPUSD3-215ENST00000475470 SNX29Q8TEQ0 813 aa17.26■□□□□ 0.35
RPUSD3-215ENST00000475470 HAS1Q92839 578 aa17.26■□□□□ 0.35
RPUSD3-215ENST00000475470 CTAGE1Q96RT6 745 aa17.26■□□□□ 0.35
RPUSD3-215ENST00000475470 C7orf25Q9BPX7 421 aa17.26■□□□□ 0.35
RPUSD3-215ENST00000475470 TRIM9Q9C026 710 aa17.26■□□□□ 0.35
RPUSD3-215ENST00000475470 STK17AQ9UEE5 414 aa17.26■□□□□ 0.35
RPUSD3-215ENST00000475470 A0A1B0GTH6 734 aa17.26■□□□□ 0.35
RPUSD3-215ENST00000475470 GRB10Q13322 594 aa17.26■□□□□ 0.35
RPUSD3-215ENST00000475470 NR1I3Q14994 352 aa17.26■□□□□ 0.35
RPUSD3-215ENST00000475470 KIAA1755Q5JYT7 1200 aa17.26■□□□□ 0.35
RPUSD3-215ENST00000475470 SPECC1LQ69YQ0 1117 aa17.26■□□□□ 0.35
RPUSD3-215ENST00000475470 SV2BQ7L1I2 683 aa17.26■□□□□ 0.35
RPUSD3-215ENST00000475470 PCDHA12Q9UN75 941 aa17.26■□□□□ 0.35
RPUSD3-215ENST00000475470 ASIC1P78348 528 aa17.25■□□□□ 0.35
RPUSD3-215ENST00000475470 ADSSL1Q8N142 457 aa17.25■□□□□ 0.35
RPUSD3-215ENST00000475470 SH2D4AQ9H788 454 aa17.25■□□□□ 0.35
RPUSD3-215ENST00000475470 SPDYE3A6NKU9 549 aa17.25■□□□□ 0.35
RPUSD3-215ENST00000475470 FOSP01100 380 aaPredicted RBP17.25■□□□□ 0.35
RPUSD3-215ENST00000475470 MMP14P50281 582 aa17.25■□□□□ 0.35
RPUSD3-215ENST00000475470 TRAF1Q13077 416 aa17.25■□□□□ 0.35
RPUSD3-215ENST00000475470 ZYXQ15942 572 aaKnown RBP17.25■□□□□ 0.35
RPUSD3-215ENST00000475470 FILIP1LQ4L180 1135 aa17.25■□□□□ 0.35
RPUSD3-215ENST00000475470 GIMAP8Q8ND71 665 aaPredicted RBP17.25■□□□□ 0.35
RPUSD3-215ENST00000475470 C16orf45Q96MC5 204 aaPredicted RBP17.25■□□□□ 0.35
RPUSD3-215ENST00000475470 PNMA5Q96PV4 448 aa17.25■□□□□ 0.35
RPUSD3-215ENST00000475470 EXOC1Q9NV70 894 aa17.25■□□□□ 0.35
RPUSD3-215ENST00000475470 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.25■□□□□ 0.35
RPUSD3-215ENST00000475470 PGAP2Q9UHJ9 254 aa17.25■□□□□ 0.35
RPUSD3-215ENST00000475470 BRCA1P38398 1863 aaKnown RBP17.24■□□□□ 0.35
RPUSD3-215ENST00000475470 ARHGAP4P98171 946 aa17.24■□□□□ 0.35
RPUSD3-215ENST00000475470 PDE4DQ08499 809 aa17.24■□□□□ 0.35
RPUSD3-215ENST00000475470 RASA3Q14644 834 aa17.24■□□□□ 0.35
RPUSD3-215ENST00000475470 R3HDM1Q15032 1099 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms