RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 CHST13Q8NET6 341 aa16.82■□□□□ 0.28
ATG9A-220ENST00000475339 PABPC5Q96DU9 382 aaKnown RBP16.82■□□□□ 0.28
ATG9A-220ENST00000475339 MRPL38Q96DV4 380 aaKnown RBP16.82■□□□□ 0.28
ATG9A-220ENST00000475339 KIF1BPQ96EK5 621 aa16.82■□□□□ 0.28
ATG9A-220ENST00000475339 C17orf80Q9BSJ5 609 aa16.82■□□□□ 0.28
ATG9A-220ENST00000475339 BCL11AQ9H165 835 aa16.82■□□□□ 0.28
ATG9A-220ENST00000475339 ALG13Q9NP73 1137 aaKnown RBP16.82■□□□□ 0.28
ATG9A-220ENST00000475339 HOMER2Q9NSB8 354 aa16.82■□□□□ 0.28
ATG9A-220ENST00000475339 TLR7Q9NYK1 1049 aaKnown RBP16.82■□□□□ 0.28
ATG9A-220ENST00000475339 FBXO40Q9UH90 709 aa16.82■□□□□ 0.28
ATG9A-220ENST00000475339 DBNLQ9UJU6 430 aaKnown RBP16.82■□□□□ 0.28
ATG9A-220ENST00000475339 Q9Y3F1 56 aa16.82■□□□□ 0.28
ATG9A-220ENST00000475339 MYO7AQ13402 2215 aa16.81■□□□□ 0.28
ATG9A-220ENST00000475339 TMEM221A6NGB7 291 aa16.81■□□□□ 0.28
ATG9A-220ENST00000475339 M0R296 226 aa16.81■□□□□ 0.28
ATG9A-220ENST00000475339 ZBED4O75132 1171 aa16.81■□□□□ 0.28
ATG9A-220ENST00000475339 RAB11FIP3O75154 756 aa16.81■□□□□ 0.28
ATG9A-220ENST00000475339 CDK8P49336 464 aa16.81■□□□□ 0.28
ATG9A-220ENST00000475339 PURAQ00577 322 aaKnown RBP16.81■□□□□ 0.28
ATG9A-220ENST00000475339 IQSEC1Q6DN90 963 aa16.81■□□□□ 0.28
ATG9A-220ENST00000475339 TAPT1Q6NXT6 567 aa16.81■□□□□ 0.28
ATG9A-220ENST00000475339 FAM117BQ6P1L5 589 aa16.81■□□□□ 0.28
ATG9A-220ENST00000475339 AACSQ86V21 672 aa16.81■□□□□ 0.28
ATG9A-220ENST00000475339 SUGP1Q8IWZ8 645 aaKnown RBP16.81■□□□□ 0.28
ATG9A-220ENST00000475339 FBXO16Q8IX29 292 aaPredicted RBP16.81■□□□□ 0.28
ATG9A-220ENST00000475339 FBXO22Q8NEZ5 403 aa16.81■□□□□ 0.28
ATG9A-220ENST00000475339 ATOH1Q92858 354 aaPredicted RBP16.81■□□□□ 0.28
ATG9A-220ENST00000475339 CTDP1Q9Y5B0 961 aaPredicted RBP16.81■□□□□ 0.28
ATG9A-220ENST00000475339 ASB14A6NK59 587 aa16.8■□□□□ 0.28
ATG9A-220ENST00000475339 RBAK-RBAKDNI3L0D1 243 aa16.8■□□□□ 0.28
ATG9A-220ENST00000475339 MYL3P08590 195 aa16.8■□□□□ 0.28
ATG9A-220ENST00000475339 BFSP2Q13515 415 aa16.8■□□□□ 0.28
ATG9A-220ENST00000475339 GPNMBQ14956 572 aa16.8■□□□□ 0.28
ATG9A-220ENST00000475339 PKN1Q16512 942 aa16.8■□□□□ 0.28
ATG9A-220ENST00000475339 NBPF20Q3BBV1 942 aa16.8■□□□□ 0.28
ATG9A-220ENST00000475339 TCEAL5Q5H9L2 206 aa16.8■□□□□ 0.28
ATG9A-220ENST00000475339 TRIM67Q6ZTA4 783 aa16.8■□□□□ 0.28
ATG9A-220ENST00000475339 CLASRPQ8N2M8 674 aaKnown RBP16.8■□□□□ 0.28
ATG9A-220ENST00000475339 BANK1Q8NDB2 785 aa16.8■□□□□ 0.28
ATG9A-220ENST00000475339 RHPN1Q8TCX5 695 aa16.8■□□□□ 0.28
ATG9A-220ENST00000475339 CCDC8Q9H0W5 538 aaPredicted RBP16.8■□□□□ 0.28
ATG9A-220ENST00000475339 IL1RAPL2Q9NP60 686 aa16.8■□□□□ 0.28
ATG9A-220ENST00000475339 CTNNA3Q9UI47 895 aa16.8■□□□□ 0.28
ATG9A-220ENST00000475339 CYP2D7A0A087X1C5 515 aa16.79■□□□□ 0.28
ATG9A-220ENST00000475339 COL19A1Q14993 1142 aa16.79■□□□□ 0.28
ATG9A-220ENST00000475339 PTPROQ16827 1216 aa16.79■□□□□ 0.28
ATG9A-220ENST00000475339 TIGD5Q53EQ6 642 aa16.79■□□□□ 0.28
ATG9A-220ENST00000475339 KIFC2Q96AC6 838 aa16.79■□□□□ 0.28
ATG9A-220ENST00000475339 SLC38A10Q9HBR0 1119 aa16.79■□□□□ 0.28
ATG9A-220ENST00000475339 POLR3EQ9NVU0 708 aa16.79■□□□□ 0.28
ATG9A-220ENST00000475339 CLDND1Q9NY35 253 aa16.79■□□□□ 0.28
ATG9A-220ENST00000475339 SIP14410 1827 aa16.79■□□□□ 0.28
ATG9A-220ENST00000475339 NDUFB10O96000 172 aa16.78■□□□□ 0.28
ATG9A-220ENST00000475339 SMAD2Q15796 467 aaKnown RBP16.78■□□□□ 0.28
ATG9A-220ENST00000475339 CLUL1Q15846 466 aa16.78■□□□□ 0.28
ATG9A-220ENST00000475339 TCTN1Q2MV58 587 aa16.78■□□□□ 0.28
ATG9A-220ENST00000475339 TMED8Q6PL24 325 aaPredicted RBP16.78■□□□□ 0.28
ATG9A-220ENST00000475339 KIAA1211Q6ZU35 1233 aa16.78■□□□□ 0.28
ATG9A-220ENST00000475339 LCORLQ8N3X6 602 aa16.78■□□□□ 0.28
ATG9A-220ENST00000475339 FBXL6Q8N531 539 aa16.78■□□□□ 0.28
ATG9A-220ENST00000475339 EAF2Q96CJ1 260 aaPredicted RBP16.78■□□□□ 0.28
ATG9A-220ENST00000475339 POP1Q99575 1024 aaKnown RBP16.78■□□□□ 0.28
ATG9A-220ENST00000475339 MTG1Q9BT17 334 aaPredicted RBP16.78■□□□□ 0.28
ATG9A-220ENST00000475339 A1CFQ9NQ94 594 aaKnown RBP16.78■□□□□ 0.28
ATG9A-220ENST00000475339 SUPT16HQ9Y5B9 1047 aaKnown RBP16.78■□□□□ 0.28
ATG9A-220ENST00000475339 MYH8P13535 1937 aa16.78■□□□□ 0.28
ATG9A-220ENST00000475339 TANC1Q9C0D5 1861 aa16.78■□□□□ 0.28
ATG9A-220ENST00000475339 USP17L12C9JPN9 530 aa16.77■□□□□ 0.28
ATG9A-220ENST00000475339 USP17L21D6R901 530 aa16.77■□□□□ 0.28
ATG9A-220ENST00000475339 F5H6K3 240 aa16.77■□□□□ 0.28
ATG9A-220ENST00000475339 IFIT2P09913 472 aaKnown RBP16.77■□□□□ 0.28
ATG9A-220ENST00000475339 LTBRP36941 435 aa16.77■□□□□ 0.28
ATG9A-220ENST00000475339 KLRC3Q07444 240 aa16.77■□□□□ 0.28
ATG9A-220ENST00000475339 ASCL5Q7RTU5 278 aa16.77■□□□□ 0.28
ATG9A-220ENST00000475339 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.77■□□□□ 0.28
ATG9A-220ENST00000475339 GPHNQ9NQX3 736 aaPredicted RBP16.77■□□□□ 0.28
ATG9A-220ENST00000475339 NOD1Q9Y239 953 aa16.77■□□□□ 0.28
ATG9A-220ENST00000475339 TRIP12Q14669 1992 aaPredicted RBP16.77■□□□□ 0.27
ATG9A-220ENST00000475339 PRKAB2O43741 272 aa16.76■□□□□ 0.27
ATG9A-220ENST00000475339 PDE6AP16499 860 aa16.76■□□□□ 0.27
ATG9A-220ENST00000475339 VCPP55072 806 aaKnown RBP16.76■□□□□ 0.27
ATG9A-220ENST00000475339 LRRFIP1Q32MZ4 808 aaKnown RBP16.76■□□□□ 0.27
ATG9A-220ENST00000475339 DUSP28Q4G0W2 176 aa16.76■□□□□ 0.27
ATG9A-220ENST00000475339 SLC9C2Q5TAH2 1124 aa16.76■□□□□ 0.27
ATG9A-220ENST00000475339 NFRKBQ6P4R8 1299 aa16.76■□□□□ 0.27
ATG9A-220ENST00000475339 CNKSR3Q6P9H4 555 aa16.76■□□□□ 0.27
ATG9A-220ENST00000475339 LRRCC1Q9C099 1032 aa16.76■□□□□ 0.27
ATG9A-220ENST00000475339 ACAD9Q9H845 621 aa16.76■□□□□ 0.27
ATG9A-220ENST00000475339 H0Y858 1186 aa16.75■□□□□ 0.27
ATG9A-220ENST00000475339 ID4P47928 161 aa16.75■□□□□ 0.27
ATG9A-220ENST00000475339 OAZ1P54368 228 aa16.75■□□□□ 0.27
ATG9A-220ENST00000475339 DLX2Q07687 328 aaPredicted RBP16.75■□□□□ 0.27
ATG9A-220ENST00000475339 AAMPQ13685 434 aa16.75■□□□□ 0.27
ATG9A-220ENST00000475339 EPC2Q52LR7 807 aa16.75■□□□□ 0.27
ATG9A-220ENST00000475339 C12orf60Q5U649 245 aa16.75■□□□□ 0.27
ATG9A-220ENST00000475339 C16orf86Q6ZW13 317 aa16.75■□□□□ 0.27
ATG9A-220ENST00000475339 IRF2BPLQ9H1B7 796 aa16.75■□□□□ 0.27
ATG9A-220ENST00000475339 NSUN3Q9H649 340 aaKnown RBP16.75■□□□□ 0.27
ATG9A-220ENST00000475339 TLR9Q9NR96 1032 aa16.75■□□□□ 0.27
ATG9A-220ENST00000475339 PCDHB15Q9Y5E8 787 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms