RNA–Protein interactions for RNA: ENST00000475302.1

ITGA6-210, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-210ENST00000475302 USP17L10C9JJH3 530 aa11.07□□□□□ -0.64
ITGA6-210ENST00000475302 RNF223E7ERA6 249 aa11.07□□□□□ -0.64
ITGA6-210ENST00000475302 CUTAO60888 179 aa11.07□□□□□ -0.64
ITGA6-210ENST00000475302 NDUFB10O96000 172 aa11.07□□□□□ -0.64
ITGA6-210ENST00000475302 MARCKSP29966 332 aaPredicted RBP11.07□□□□□ -0.64
ITGA6-210ENST00000475302 TNNI2P48788 182 aa11.07□□□□□ -0.64
ITGA6-210ENST00000475302 MRE11P49959 708 aa11.07□□□□□ -0.64
ITGA6-210ENST00000475302 GRIN1Q05586 938 aa11.07□□□□□ -0.64
ITGA6-210ENST00000475302 KIF4BQ2VIQ3 1234 aa11.07□□□□□ -0.64
ITGA6-210ENST00000475302 TBC1D10BQ4KMP7 808 aaPredicted RBP11.07□□□□□ -0.64
ITGA6-210ENST00000475302 RESP18Q5W5W9 173 aa11.07□□□□□ -0.64
ITGA6-210ENST00000475302 MIGA2Q7L4E1 593 aa11.07□□□□□ -0.64
ITGA6-210ENST00000475302 FSIP1Q8NA03 581 aa11.07□□□□□ -0.64
ITGA6-210ENST00000475302 ACER1Q8TDN7 264 aa11.07□□□□□ -0.64
ITGA6-210ENST00000475302 PIBF1Q8WXW3 757 aa11.07□□□□□ -0.64
ITGA6-210ENST00000475302 MRPS27Q92552 414 aaKnown RBP11.07□□□□□ -0.64
ITGA6-210ENST00000475302 SPSB2Q99619 263 aa11.07□□□□□ -0.64
ITGA6-210ENST00000475302 HACL1Q9UJ83 578 aa11.07□□□□□ -0.64
ITGA6-210ENST00000475302 ZNF112Q9UJU3 913 aa11.07□□□□□ -0.64
ITGA6-210ENST00000475302 MTMR7Q9Y216 660 aa11.07□□□□□ -0.64
ITGA6-210ENST00000475302 GJA3Q9Y6H8 435 aa11.07□□□□□ -0.64
ITGA6-210ENST00000475302 GOLGA6L4A6NEF3 574 aa11.06□□□□□ -0.64
ITGA6-210ENST00000475302 SLC16A2P36021 539 aa11.06□□□□□ -0.64
ITGA6-210ENST00000475302 GGCXP38435 758 aa11.06□□□□□ -0.64
ITGA6-210ENST00000475302 ECE1P42892 770 aa11.06□□□□□ -0.64
ITGA6-210ENST00000475302 NDUFA8P51970 172 aa11.06□□□□□ -0.64
ITGA6-210ENST00000475302 TNFAIP1Q13829 316 aa11.06□□□□□ -0.64
ITGA6-210ENST00000475302 IL17AQ16552 155 aa11.06□□□□□ -0.64
ITGA6-210ENST00000475302 RNF19BQ6ZMZ0 732 aa11.06□□□□□ -0.64
ITGA6-210ENST00000475302 KCTD1Q719H9 257 aa11.06□□□□□ -0.64
ITGA6-210ENST00000475302 HEATR3Q7Z4Q2 680 aa11.06□□□□□ -0.64
ITGA6-210ENST00000475302 CCDC148Q8NFR7 591 aa11.06□□□□□ -0.64
ITGA6-210ENST00000475302 BICD2Q8TD16 824 aa11.06□□□□□ -0.64
ITGA6-210ENST00000475302 TRPM4Q8TD43 1214 aa11.06□□□□□ -0.64
ITGA6-210ENST00000475302 TRIM34Q9BYJ4 488 aa11.06□□□□□ -0.64
ITGA6-210ENST00000475302 NUP62CLQ9H1M0 184 aa11.06□□□□□ -0.64
ITGA6-210ENST00000475302 DEFB129Q9H1M3 183 aa11.06□□□□□ -0.64
ITGA6-210ENST00000475302 VAT1LQ9HCJ6 419 aa11.06□□□□□ -0.64
ITGA6-210ENST00000475302 GINM1Q9NU53 330 aa11.06□□□□□ -0.64
ITGA6-210ENST00000475302 SCAF8Q9UPN6 1271 aaKnown RBP11.06□□□□□ -0.64
ITGA6-210ENST00000475302 SRPRBQ9Y5M8 271 aaKnown RBP11.06□□□□□ -0.64
ITGA6-210ENST00000475302 MRVI1Q9Y6F6 885 aa11.06□□□□□ -0.64
ITGA6-210ENST00000475302 A0A1B0GVL5 298 aa11.05□□□□□ -0.64
ITGA6-210ENST00000475302 SMCO2A6NFE2 343 aa11.05□□□□□ -0.64
ITGA6-210ENST00000475302 TRIM75PA6NK02 468 aa11.05□□□□□ -0.64
ITGA6-210ENST00000475302 ZBTB5O15062 677 aa11.05□□□□□ -0.64
ITGA6-210ENST00000475302 PLA2G6O60733 806 aa11.05□□□□□ -0.64
ITGA6-210ENST00000475302 EPS15P42566 896 aa11.05□□□□□ -0.64
ITGA6-210ENST00000475302 SLC1A4P43007 532 aa11.05□□□□□ -0.64
ITGA6-210ENST00000475302 CLK2P49760 499 aaKnown RBP11.05□□□□□ -0.64
ITGA6-210ENST00000475302 ATP2C1P98194 919 aaPredicted RBP11.05□□□□□ -0.64
ITGA6-210ENST00000475302 GNL2Q13823 731 aaKnown RBP11.05□□□□□ -0.64
ITGA6-210ENST00000475302 TTC38Q5R3I4 469 aa11.05□□□□□ -0.64
ITGA6-210ENST00000475302 L1TD1Q5T7N2 865 aaKnown RBP11.05□□□□□ -0.64
ITGA6-210ENST00000475302 PIK3AP1Q6ZUJ8 805 aa11.05□□□□□ -0.64
ITGA6-210ENST00000475302 ELOA2Q8IYF1 753 aaPredicted RBP11.05□□□□□ -0.64
ITGA6-210ENST00000475302 JMYQ8N9B5 988 aa11.05□□□□□ -0.64
ITGA6-210ENST00000475302 RASGRP4Q8TDF6 673 aa11.05□□□□□ -0.64
ITGA6-210ENST00000475302 TIGD1Q96MW7 591 aa11.05□□□□□ -0.64
ITGA6-210ENST00000475302 CLIC6Q96NY7 704 aa11.05□□□□□ -0.64
ITGA6-210ENST00000475302 GLIS2Q9BZE0 524 aaPredicted RBP11.05□□□□□ -0.64
ITGA6-210ENST00000475302 PRKD2Q9BZL6 878 aa11.05□□□□□ -0.64
ITGA6-210ENST00000475302 BRMS1Q9HCU9 246 aa11.05□□□□□ -0.64
ITGA6-210ENST00000475302 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.05□□□□□ -0.64
ITGA6-210ENST00000475302 SSC5DA1L4H1 1573 aa11.04□□□□□ -0.64
ITGA6-210ENST00000475302 H7C1D1 291 aa11.04□□□□□ -0.64
ITGA6-210ENST00000475302 HOXA2O43364 376 aa11.04□□□□□ -0.64
ITGA6-210ENST00000475302 BMP3P12645 472 aa11.04□□□□□ -0.64
ITGA6-210ENST00000475302 PFKFB1P16118 471 aa11.04□□□□□ -0.64
ITGA6-210ENST00000475302 ATP2B2Q01814 1243 aa11.04□□□□□ -0.64
ITGA6-210ENST00000475302 GUCA2AQ02747 115 aa11.04□□□□□ -0.64
ITGA6-210ENST00000475302 CAMK4Q16566 473 aa11.04□□□□□ -0.64
ITGA6-210ENST00000475302 QRICH1Q2TAL8 776 aa11.04□□□□□ -0.64
ITGA6-210ENST00000475302 NBPF12Q5TAG4 269 aaPredicted RBP11.04□□□□□ -0.64
ITGA6-210ENST00000475302 ANGEL2Q5VTE6 544 aaKnown RBP11.04□□□□□ -0.64
ITGA6-210ENST00000475302 HOMER1Q86YM7 354 aa11.04□□□□□ -0.64
ITGA6-210ENST00000475302 CCDC12Q8WUD4 166 aaPredicted RBP11.04□□□□□ -0.64
ITGA6-210ENST00000475302 COA7Q96BR5 231 aa11.04□□□□□ -0.64
ITGA6-210ENST00000475302 NUP88Q99567 741 aaPredicted RBP11.04□□□□□ -0.64
ITGA6-210ENST00000475302 SLC6A16Q9GZN6 736 aa11.04□□□□□ -0.64
ITGA6-210ENST00000475302 TSPY26PQ9H489 355 aa11.04□□□□□ -0.64
ITGA6-210ENST00000475302 VCPKMTQ9H867 229 aa11.04□□□□□ -0.64
ITGA6-210ENST00000475302 RIC8AQ9NPQ8 531 aa11.04□□□□□ -0.64
ITGA6-210ENST00000475302 CTAGE5O15320 804 aa11.03□□□□□ -0.64
ITGA6-210ENST00000475302 CTNND1O60716 968 aaKnown RBP11.03□□□□□ -0.64
ITGA6-210ENST00000475302 DDNO94850 711 aaPredicted RBP11.03□□□□□ -0.64
ITGA6-210ENST00000475302 ZNF202O95125 648 aa11.03□□□□□ -0.64
ITGA6-210ENST00000475302 BMP15O95972 392 aa11.03□□□□□ -0.64
ITGA6-210ENST00000475302 ASNSP08243 561 aa11.03□□□□□ -0.64
ITGA6-210ENST00000475302 GNA11P29992 359 aa11.03□□□□□ -0.64
ITGA6-210ENST00000475302 NAPAP54920 295 aa11.03□□□□□ -0.64
ITGA6-210ENST00000475302 ZNF174Q15697 407 aa11.03□□□□□ -0.64
ITGA6-210ENST00000475302 MAP3K11Q16584 847 aa11.03□□□□□ -0.64
ITGA6-210ENST00000475302 CCDC96Q2M329 555 aa11.03□□□□□ -0.64
ITGA6-210ENST00000475302 BRICD5Q6PL45 260 aa11.03□□□□□ -0.64
ITGA6-210ENST00000475302 CCDC73Q6ZRK6 1079 aa11.03□□□□□ -0.64
ITGA6-210ENST00000475302 USP49Q70CQ1 688 aa11.03□□□□□ -0.64
ITGA6-210ENST00000475302 KRT25Q7Z3Z0 450 aa11.03□□□□□ -0.64
ITGA6-210ENST00000475302 FAM160A2Q8N612 972 aaPredicted RBP11.03□□□□□ -0.64
ITGA6-210ENST00000475302 FERMT2Q96AC1 680 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms