RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 CCDC192P0DO97 292 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 FCER1AP12319 257 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 ERCC3P19447 782 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 PTPREP23469 700 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 SMARCA1P28370 1054 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 CTGFP29279 349 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 CEBPZQ03701 1054 aaKnown RBP4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 SCRN1Q12765 414 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 GRB14Q14449 540 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 PPP2R5BQ15173 497 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 MORN1Q5T089 497 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 SNRNP48Q6IEG0 339 aaKnown RBP4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 CHST3Q7LGC8 479 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 MTERF4Q7Z6M4 381 aaKnown RBP4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 SGMS1Q86VZ5 419 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 NCAPG2Q86XI2 1143 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 CTCFLQ8NI51 663 aaPredicted RBP4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 NKX2-3Q8TAU0 364 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 GTF3C6Q969F1 213 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 CCDC94Q9BW85 323 aaPredicted RBP4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 RBM28Q9NW13 759 aaKnown RBP4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 DACT1Q9NYF0 836 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 ZNF214Q9UL59 606 aaPredicted RBP4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 MTMR7Q9Y216 660 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 SLC12A7Q9Y666 1083 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 FRMPD2Q68DX3 1309 aaPredicted RBP4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 CEP350Q5VT06 3117 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 PLXNB2O15031 1838 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 PALM3A6NDB9 673 aaPredicted RBP4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 H3BQV1 296 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 ICAM1P05362 532 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 XRCC5P13010 732 aaKnown RBP4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 FOSBP53539 338 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 UBXN2AP68543 259 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 CCT2P78371 535 aaKnown RBP4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 PRKCZQ05513 592 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 APOBRQ0VD83 1088 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 MAP2K5Q13163 448 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 KCTD2Q14681 263 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 IFFO2Q5TF58 517 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 WDR78Q5VTH9 848 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 POTEEQ6S8J3 1075 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 ZNF654Q8IZM8 581 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 SPDYE1Q8NFV5 336 aaPredicted RBP4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 LEO1Q8WVC0 666 aaPredicted RBP4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 USP6NLQ92738 828 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 MMP19Q99542 508 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 APBA2Q99767 749 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 PORCNQ9H237 461 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 MAD2L2Q9UI95 211 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 GJD2Q9UKL4 321 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 NAP1L2Q9ULW6 460 aaPredicted RBP4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 HPS5Q9UPZ3 1129 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 PTCH2Q9Y6C5 1203 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 ZSWIM8A7E2V4 1837 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 CCDC196A0A1B0GTZ2 297 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 KLRF2D3W0D1 207 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 ADCY3O60266 1144 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 NR1I2O75469 434 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 GRK4P32298 578 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 SLC16A2P36021 539 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 FLT3LGP49771 235 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 TROAPQ12815 778 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 SLC9C1Q4G0N8 1177 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 TTBK2Q6IQ55 1244 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 CCDC174Q6PII3 467 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 SASS6Q6UVJ0 657 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 DPP9Q86TI2 863 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 ADGRF4Q8IZF3 695 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 SAMD3Q8N6K7 520 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 SPC24Q8NBT2 197 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 ARMC5Q96C12 935 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 ABHD8Q96I13 439 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 PGBD1Q96JS3 809 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 SPZ1Q9BXG8 430 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 NUP62CLQ9H1M0 184 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 TNMDQ9H2S6 317 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 ACAD9Q9H845 621 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 RAVER2Q9HCJ3 691 aaKnown RBP4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 CCPG1Q9ULG6 757 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 GABRQQ9UN88 632 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 DIS3Q9Y2L1 958 aaKnown RBP4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 PFASO15067 1338 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 ELP1O95163 1332 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 ABCB11O95342 1321 aa4.78□□□□□ -1.64
GAPVD1-216ENST00000474637 ZBTB43O43298 467 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 DHX16O60231 1041 aaKnown RBP4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 PFKFB2O60825 505 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 CTDNEP1O95476 244 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 HMGCRP04035 888 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 HOXC6P09630 235 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 GOLGA8HP0CJ92 632 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 ADORA2AP29274 412 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 TYRO3Q06418 890 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 RESTQ13127 1097 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 NOLC1Q14978 699 aaKnown RBP eCLIP4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 CDC37Q16543 378 aaPredicted RBP4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 MFSD14CQ5VZR4 134 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 OLFML2BQ68BL8 750 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 LUZP1Q86V48 1076 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms