RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 FCER1AP12319 257 aa11.8□□□□□ -0.52
COL12A1-206ENST00000474564 MAPK4P31152 587 aa11.8□□□□□ -0.52
COL12A1-206ENST00000474564 USP11P51784 963 aa11.8□□□□□ -0.52
COL12A1-206ENST00000474564 ERVK-9P63128 1117 aa11.8□□□□□ -0.52
COL12A1-206ENST00000474564 ERVK-24P63145 666 aa11.8□□□□□ -0.52
COL12A1-206ENST00000474564 RESTQ13127 1097 aa11.8□□□□□ -0.52
COL12A1-206ENST00000474564 ORC2Q13416 577 aaPredicted RBP11.8□□□□□ -0.52
COL12A1-206ENST00000474564 PKP1Q13835 747 aa11.8□□□□□ -0.52
COL12A1-206ENST00000474564 KIF22Q14807 665 aa11.8□□□□□ -0.52
COL12A1-206ENST00000474564 ARHGEF6Q15052 776 aa11.8□□□□□ -0.52
COL12A1-206ENST00000474564 FOXD4L6Q3SYB3 417 aaPredicted RBP11.8□□□□□ -0.52
COL12A1-206ENST00000474564 FOXD4L3Q6VB84 417 aaPredicted RBP11.8□□□□□ -0.52
COL12A1-206ENST00000474564 FCHSD1Q86WN1 690 aa11.8□□□□□ -0.52
COL12A1-206ENST00000474564 ZNF214Q9UL59 606 aaPredicted RBP11.8□□□□□ -0.52
COL12A1-206ENST00000474564 ZNF536O15090 1300 aa11.8□□□□□ -0.52
COL12A1-206ENST00000474564 CA12O43570 354 aa11.79□□□□□ -0.52
COL12A1-206ENST00000474564 GCFC2P16383 781 aaKnown RBP11.79□□□□□ -0.52
COL12A1-206ENST00000474564 ATP2B1P20020 1258 aa11.79□□□□□ -0.52
COL12A1-206ENST00000474564 NR5A1Q13285 461 aa11.79□□□□□ -0.52
COL12A1-206ENST00000474564 STK38Q15208 465 aa11.79□□□□□ -0.52
COL12A1-206ENST00000474564 FAM110CQ1W6H9 321 aa11.79□□□□□ -0.52
COL12A1-206ENST00000474564 MYSM1Q5VVJ2 828 aa11.79□□□□□ -0.52
COL12A1-206ENST00000474564 NEK8Q86SG6 692 aa11.79□□□□□ -0.52
COL12A1-206ENST00000474564 ANKRD13CQ8N6S4 541 aa11.79□□□□□ -0.52
COL12A1-206ENST00000474564 REPS2Q8NFH8 660 aa11.79□□□□□ -0.52
COL12A1-206ENST00000474564 SPATA32Q96LK8 384 aa11.79□□□□□ -0.52
COL12A1-206ENST00000474564 MMP19Q99542 508 aa11.79□□□□□ -0.52
COL12A1-206ENST00000474564 MOV10L1Q9BXT6 1211 aaKnown RBP11.79□□□□□ -0.52
COL12A1-206ENST00000474564 BTBD7Q9P203 1132 aa11.79□□□□□ -0.52
COL12A1-206ENST00000474564 RBPJLQ9UBG7 517 aa11.79□□□□□ -0.52
COL12A1-206ENST00000474564 MORF4L1Q9UBU8 362 aa11.79□□□□□ -0.52
COL12A1-206ENST00000474564 ZDHHC9Q9Y397 364 aa11.79□□□□□ -0.52
COL12A1-206ENST00000474564 LOC285556D6RIA3 1793 aa11.78□□□□□ -0.52
COL12A1-206ENST00000474564 POTEB2H3BUK9 544 aa11.78□□□□□ -0.52
COL12A1-206ENST00000474564 TLR2O60603 784 aa11.78□□□□□ -0.52
COL12A1-206ENST00000474564 BAG4O95429 457 aaKnown RBP11.78□□□□□ -0.52
COL12A1-206ENST00000474564 ERCC3P19447 782 aa11.78□□□□□ -0.52
COL12A1-206ENST00000474564 HOXA13P31271 388 aaPredicted RBP11.78□□□□□ -0.52
COL12A1-206ENST00000474564 MCM4P33991 863 aa11.78□□□□□ -0.52
COL12A1-206ENST00000474564 UBE2SQ16763 222 aa11.78□□□□□ -0.52
COL12A1-206ENST00000474564 TTC38Q5R3I4 469 aa11.78□□□□□ -0.52
COL12A1-206ENST00000474564 ARHGEF16Q5VV41 709 aa11.78□□□□□ -0.52
COL12A1-206ENST00000474564 ANO1Q5XXA6 986 aa11.78□□□□□ -0.52
COL12A1-206ENST00000474564 TYW1BQ6NUM6 668 aa11.78□□□□□ -0.52
COL12A1-206ENST00000474564 XRRA1Q6P2D8 792 aa11.78□□□□□ -0.52
COL12A1-206ENST00000474564 USP17L6PQ6QN14 398 aa11.78□□□□□ -0.52
COL12A1-206ENST00000474564 KCNG4Q8TDN1 519 aa11.78□□□□□ -0.52
COL12A1-206ENST00000474564 OXER1Q8TDS5 423 aa11.78□□□□□ -0.52
COL12A1-206ENST00000474564 NSUN6Q8TEA1 469 aaKnown RBP11.78□□□□□ -0.52
COL12A1-206ENST00000474564 TBCKQ8TEA7 893 aa11.78□□□□□ -0.52
COL12A1-206ENST00000474564 PTPN18Q99952 460 aa11.78□□□□□ -0.52
COL12A1-206ENST00000474564 ANO3Q9BYT9 981 aa11.78□□□□□ -0.52
COL12A1-206ENST00000474564 TFIP11Q9UBB9 837 aaKnown RBP11.78□□□□□ -0.52
COL12A1-206ENST00000474564 IGF2BP3O00425 579 aaKnown RBP eCLIP11.77□□□□□ -0.53
COL12A1-206ENST00000474564 LAD1O00515 517 aa11.77□□□□□ -0.53
COL12A1-206ENST00000474564 NFIBO00712 420 aa11.77□□□□□ -0.53
COL12A1-206ENST00000474564 MEIS2O14770 477 aa11.77□□□□□ -0.53
COL12A1-206ENST00000474564 CCNT1O60563 726 aaKnown RBP11.77□□□□□ -0.53
COL12A1-206ENST00000474564 YEATS4O95619 227 aa11.77□□□□□ -0.53
COL12A1-206ENST00000474564 HSD17B4P51659 736 aa11.77□□□□□ -0.53
COL12A1-206ENST00000474564 RPS6P62753 249 aaKnown RBP11.77□□□□□ -0.53
COL12A1-206ENST00000474564 CEBPZQ03701 1054 aaKnown RBP11.77□□□□□ -0.53
COL12A1-206ENST00000474564 DNM1Q05193 864 aaKnown RBP11.77□□□□□ -0.53
COL12A1-206ENST00000474564 BAATQ14032 418 aaPredicted RBP11.77□□□□□ -0.53
COL12A1-206ENST00000474564 INF2Q27J81 1249 aa11.77□□□□□ -0.53
COL12A1-206ENST00000474564 LETM2Q2VYF4 491 aa11.77□□□□□ -0.53
COL12A1-206ENST00000474564 MUM1L1Q5H9M0 696 aa11.77□□□□□ -0.53
COL12A1-206ENST00000474564 ABRAQ8N0Z2 381 aa11.77□□□□□ -0.53
COL12A1-206ENST00000474564 DNERQ8NFT8 737 aa11.77□□□□□ -0.53
COL12A1-206ENST00000474564 RASGRP4Q8TDF6 673 aa11.77□□□□□ -0.53
COL12A1-206ENST00000474564 CLEC4DQ8WXI8 215 aa11.77□□□□□ -0.53
COL12A1-206ENST00000474564 POLR3EQ9NVU0 708 aa11.77□□□□□ -0.53
COL12A1-206ENST00000474564 TMEM260Q9NX78 707 aa11.77□□□□□ -0.53
COL12A1-206ENST00000474564 RTEL1Q9NZ71 1219 aa11.77□□□□□ -0.53
COL12A1-206ENST00000474564 KIF28PB7ZC32 967 aa11.76□□□□□ -0.53
COL12A1-206ENST00000474564 FIBPO43427 364 aa11.76□□□□□ -0.53
COL12A1-206ENST00000474564 STAM2O75886 525 aa11.76□□□□□ -0.53
COL12A1-206ENST00000474564 HSPA6P17066 643 aa11.76□□□□□ -0.53
COL12A1-206ENST00000474564 CLK2P49760 499 aaKnown RBP11.76□□□□□ -0.53
COL12A1-206ENST00000474564 ARHGAP4P98171 946 aa11.76□□□□□ -0.53
COL12A1-206ENST00000474564 GHRHRQ02643 423 aa11.76□□□□□ -0.53
COL12A1-206ENST00000474564 MAP2K1Q02750 393 aaPredicted RBP11.76□□□□□ -0.53
COL12A1-206ENST00000474564 CLEC17AQ6ZS10 378 aa11.76□□□□□ -0.53
COL12A1-206ENST00000474564 DPP9Q86TI2 863 aa11.76□□□□□ -0.53
COL12A1-206ENST00000474564 IWS1Q96ST2 819 aa11.76□□□□□ -0.53
COL12A1-206ENST00000474564 RMDN3Q96TC7 470 aa11.76□□□□□ -0.53
COL12A1-206ENST00000474564 RAB34Q9BZG1 259 aa11.76□□□□□ -0.53
COL12A1-206ENST00000474564 TCEAL9Q9UHQ7 104 aa11.76□□□□□ -0.53
COL12A1-206ENST00000474564 CPA4Q9UI42 421 aa11.76□□□□□ -0.53
COL12A1-206ENST00000474564 RIPK3Q9Y572 518 aa11.76□□□□□ -0.53
COL12A1-206ENST00000474564 LOC102724159A0A0B4J2E5 919 aa11.75□□□□□ -0.53
COL12A1-206ENST00000474564 M0R2N6 131 aa11.75□□□□□ -0.53
COL12A1-206ENST00000474564 SPTLC2O15270 562 aa11.75□□□□□ -0.53
COL12A1-206ENST00000474564 NEMFO60524 1076 aa11.75□□□□□ -0.53
COL12A1-206ENST00000474564 AOC2O75106 756 aa11.75□□□□□ -0.53
COL12A1-206ENST00000474564 HOXD10P28358 340 aa11.75□□□□□ -0.53
COL12A1-206ENST00000474564 CCND2P30279 289 aa11.75□□□□□ -0.53
COL12A1-206ENST00000474564 MCM7P33993 719 aa11.75□□□□□ -0.53
COL12A1-206ENST00000474564 SREBF1P36956 1147 aa11.75□□□□□ -0.53
COL12A1-206ENST00000474564 ME1P48163 572 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms