RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 NEDD4P46934 1319 aa12.98□□□□□ -0.33
SEMA4D-216ENST00000474258 DLL1O00548 723 aa12.98□□□□□ -0.33
SEMA4D-216ENST00000474258 NFIBO00712 420 aa12.98□□□□□ -0.33
SEMA4D-216ENST00000474258 ALDH5A1P51649 535 aaPredicted RBP12.98□□□□□ -0.33
SEMA4D-216ENST00000474258 PPIGQ13427 754 aaKnown RBP eCLIP12.98□□□□□ -0.33
SEMA4D-216ENST00000474258 GPATCH4Q5T3I0 446 aaKnown RBP12.98□□□□□ -0.33
SEMA4D-216ENST00000474258 CXCL17Q6UXB2 119 aa12.98□□□□□ -0.33
SEMA4D-216ENST00000474258 CLEC4DQ8WXI8 215 aa12.98□□□□□ -0.33
SEMA4D-216ENST00000474258 ZKSCAN3Q9BRR0 538 aa12.98□□□□□ -0.33
SEMA4D-216ENST00000474258 DSCC1Q9BVC3 393 aa12.98□□□□□ -0.33
SEMA4D-216ENST00000474258 DDX49Q9Y6V7 483 aaKnown RBP12.98□□□□□ -0.33
SEMA4D-216ENST00000474258 WDR19Q8NEZ3 1342 aa12.97□□□□□ -0.33
SEMA4D-216ENST00000474258 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.97□□□□□ -0.33
SEMA4D-216ENST00000474258 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.97□□□□□ -0.33
SEMA4D-216ENST00000474258 CD4P01730 458 aa12.97□□□□□ -0.33
SEMA4D-216ENST00000474258 CALML3P27482 149 aa12.97□□□□□ -0.33
SEMA4D-216ENST00000474258 ITGA7Q13683 1181 aa12.97□□□□□ -0.33
SEMA4D-216ENST00000474258 IMMTQ16891 758 aaKnown RBP12.97□□□□□ -0.33
SEMA4D-216ENST00000474258 DUSP28Q4G0W2 176 aa12.97□□□□□ -0.33
SEMA4D-216ENST00000474258 RNF207Q6ZRF8 634 aa12.97□□□□□ -0.33
SEMA4D-216ENST00000474258 TMEM199Q8N511 208 aa12.97□□□□□ -0.33
SEMA4D-216ENST00000474258 SLC43A3Q8NBI5 491 aa12.97□□□□□ -0.33
SEMA4D-216ENST00000474258 MPHOSPH6Q99547 160 aaKnown RBP12.97□□□□□ -0.33
SEMA4D-216ENST00000474258 CTNNA3Q9UI47 895 aa12.97□□□□□ -0.33
SEMA4D-216ENST00000474258 TRIP12Q14669 1992 aaPredicted RBP12.97□□□□□ -0.33
SEMA4D-216ENST00000474258 GBF1Q92538 1859 aa12.97□□□□□ -0.33
SEMA4D-216ENST00000474258 TMEM265A0A087WTH1 108 aa12.96□□□□□ -0.33
SEMA4D-216ENST00000474258 RBM47A0AV96 593 aaKnown RBP12.96□□□□□ -0.33
SEMA4D-216ENST00000474258 B4DLN1 442 aa12.96□□□□□ -0.33
SEMA4D-216ENST00000474258 B4E1Z4 1266 aa12.96□□□□□ -0.33
SEMA4D-216ENST00000474258 KDM4AO75164 1064 aa12.96□□□□□ -0.33
SEMA4D-216ENST00000474258 MRPL12P52815 198 aaKnown RBP12.96□□□□□ -0.33
SEMA4D-216ENST00000474258 PNMA1Q8ND90 353 aa12.96□□□□□ -0.33
SEMA4D-216ENST00000474258 DNERQ8NFT8 737 aa12.96□□□□□ -0.33
SEMA4D-216ENST00000474258 ANKS1AQ92625 1134 aa12.96□□□□□ -0.33
SEMA4D-216ENST00000474258 CDX2Q99626 313 aaPredicted RBP12.96□□□□□ -0.33
SEMA4D-216ENST00000474258 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.96□□□□□ -0.33
SEMA4D-216ENST00000474258 WDR11Q9BZH6 1224 aa12.96□□□□□ -0.33
SEMA4D-216ENST00000474258 PPP1R12CQ9BZL4 782 aa12.96□□□□□ -0.33
SEMA4D-216ENST00000474258 KAT14Q9H8E8 782 aa12.96□□□□□ -0.33
SEMA4D-216ENST00000474258 ZSWIM5Q9P217 1185 aa12.96□□□□□ -0.33
SEMA4D-216ENST00000474258 SCN10AQ9Y5Y9 1956 aa12.96□□□□□ -0.34
SEMA4D-216ENST00000474258 GOLGA8HP0CJ92 632 aa12.95□□□□□ -0.34
SEMA4D-216ENST00000474258 CSF2RAP15509 400 aa12.95□□□□□ -0.34
SEMA4D-216ENST00000474258 PTGS1P23219 599 aa12.95□□□□□ -0.34
SEMA4D-216ENST00000474258 RPS6P62753 249 aaKnown RBP12.95□□□□□ -0.34
SEMA4D-216ENST00000474258 PDE4DQ08499 809 aa12.95□□□□□ -0.34
SEMA4D-216ENST00000474258 TMEM240Q5SV17 173 aa12.95□□□□□ -0.34
SEMA4D-216ENST00000474258 TMEM63BQ5T3F8 832 aa12.95□□□□□ -0.34
SEMA4D-216ENST00000474258 SLC30A10Q6XR72 485 aa12.95□□□□□ -0.34
SEMA4D-216ENST00000474258 RGS22Q8NE09 1264 aa12.95□□□□□ -0.34
SEMA4D-216ENST00000474258 ZSCAN10Q96SZ4 725 aaPredicted RBP12.95□□□□□ -0.34
SEMA4D-216ENST00000474258 KRT23Q9C075 422 aa12.95□□□□□ -0.34
SEMA4D-216ENST00000474258 UBA5Q9GZZ9 404 aa12.95□□□□□ -0.34
SEMA4D-216ENST00000474258 MAF1Q9H063 256 aa12.95□□□□□ -0.34
SEMA4D-216ENST00000474258 TTYH1Q9H313 450 aaPredicted RBP12.95□□□□□ -0.34
SEMA4D-216ENST00000474258 CNNM2Q9H8M5 875 aa12.95□□□□□ -0.34
SEMA4D-216ENST00000474258 BAZ2BQ9UIF8 2168 aaKnown RBP12.95□□□□□ -0.34
SEMA4D-216ENST00000474258 GRIN2DO15399 1336 aa12.94□□□□□ -0.34
SEMA4D-216ENST00000474258 NKRFO15226 690 aaKnown RBP eCLIP12.94□□□□□ -0.34
SEMA4D-216ENST00000474258 CYP2C18P33260 490 aa12.94□□□□□ -0.34
SEMA4D-216ENST00000474258 CPT1AP50416 773 aa12.94□□□□□ -0.34
SEMA4D-216ENST00000474258 USH1GQ495M9 461 aa12.94□□□□□ -0.34
SEMA4D-216ENST00000474258 ASPRV1Q53RT3 343 aa12.94□□□□□ -0.34
SEMA4D-216ENST00000474258 PSRC1Q6PGN9 363 aaPredicted RBP12.94□□□□□ -0.34
SEMA4D-216ENST00000474258 C16orf59Q7L2K0 433 aa12.94□□□□□ -0.34
SEMA4D-216ENST00000474258 HIPK3Q9H422 1215 aa12.94□□□□□ -0.34
SEMA4D-216ENST00000474258 POLR3EQ9NVU0 708 aa12.94□□□□□ -0.34
SEMA4D-216ENST00000474258 TNKSO95271 1327 aa12.93□□□□□ -0.34
SEMA4D-216ENST00000474258 ABCB11O95342 1321 aa12.93□□□□□ -0.34
SEMA4D-216ENST00000474258 SCN5AQ14524 2016 aa12.93□□□□□ -0.34
SEMA4D-216ENST00000474258 B4GALT4O60513 344 aa12.93□□□□□ -0.34
SEMA4D-216ENST00000474258 PARP1P09874 1014 aaKnown RBP12.93□□□□□ -0.34
SEMA4D-216ENST00000474258 ACRP10323 421 aa12.93□□□□□ -0.34
SEMA4D-216ENST00000474258 EDNRBP24530 442 aa12.93□□□□□ -0.34
SEMA4D-216ENST00000474258 PSMC6P62333 389 aa12.93□□□□□ -0.34
SEMA4D-216ENST00000474258 PPP2R5BQ15173 497 aa12.93□□□□□ -0.34
SEMA4D-216ENST00000474258 CDC37Q16543 378 aaPredicted RBP12.93□□□□□ -0.34
SEMA4D-216ENST00000474258 BRDTQ58F21 947 aaPredicted RBP12.93□□□□□ -0.34
SEMA4D-216ENST00000474258 ZNF365Q70YC5 407 aa12.93□□□□□ -0.34
SEMA4D-216ENST00000474258 ADGRF4Q8IZF3 695 aa12.93□□□□□ -0.34
SEMA4D-216ENST00000474258 ENAHQ8N8S7 591 aaPredicted RBP12.93□□□□□ -0.34
SEMA4D-216ENST00000474258 OR6J1Q8NGC5 347 aa12.93□□□□□ -0.34
SEMA4D-216ENST00000474258 SCFD2Q8WU76 684 aa12.93□□□□□ -0.34
SEMA4D-216ENST00000474258 UBAC1Q9BSL1 405 aa12.93□□□□□ -0.34
SEMA4D-216ENST00000474258 CPVLQ9H3G5 476 aa12.93□□□□□ -0.34
SEMA4D-216ENST00000474258 IL23AQ9NPF7 189 aa12.93□□□□□ -0.34
SEMA4D-216ENST00000474258 GPHNQ9NQX3 736 aaPredicted RBP12.93□□□□□ -0.34
SEMA4D-216ENST00000474258 RAD50Q92878 1312 aa12.92□□□□□ -0.34
SEMA4D-216ENST00000474258 MYL3P08590 195 aa12.92□□□□□ -0.34
SEMA4D-216ENST00000474258 DNAJB2P25686 324 aa12.92□□□□□ -0.34
SEMA4D-216ENST00000474258 PURAQ00577 322 aaKnown RBP12.92□□□□□ -0.34
SEMA4D-216ENST00000474258 RASIP1Q5U651 963 aa12.92□□□□□ -0.34
SEMA4D-216ENST00000474258 MCF2L2Q86YR7 1114 aa12.92□□□□□ -0.34
SEMA4D-216ENST00000474258 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.92□□□□□ -0.34
SEMA4D-216ENST00000474258 MYLIPQ8WY64 445 aa12.92□□□□□ -0.34
SEMA4D-216ENST00000474258 TRPV6Q9H1D0 765 aa12.92□□□□□ -0.34
SEMA4D-216ENST00000474258 ALDH8A1Q9H2A2 487 aaPredicted RBP12.92□□□□□ -0.34
SEMA4D-216ENST00000474258 MTIF3Q9H2K0 278 aaKnown RBP12.92□□□□□ -0.34
SEMA4D-216ENST00000474258 DHX16O60231 1041 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms