RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 CALM3P0DP25 149 aa23.81■■□□□ 1.4
SNX13-206ENST00000474067 MAGEA10P43363 369 aaPredicted RBP23.81■■□□□ 1.4
SNX13-206ENST00000474067 GRM4Q14833 912 aa23.81■■□□□ 1.4
SNX13-206ENST00000474067 KCNA10Q16322 511 aa23.81■■□□□ 1.4
SNX13-206ENST00000474067 QRICH1Q2TAL8 776 aa23.81■■□□□ 1.4
SNX13-206ENST00000474067 TLK2Q86UE8 772 aa23.81■■□□□ 1.4
SNX13-206ENST00000474067 TOX2Q96NM4 488 aa23.81■■□□□ 1.4
SNX13-206ENST00000474067 LSG1Q9H089 658 aaKnown RBP23.81■■□□□ 1.4
SNX13-206ENST00000474067 VAT1LQ9HCJ6 419 aa23.81■■□□□ 1.4
SNX13-206ENST00000474067 MCM3APO60318 1980 aa23.8■■□□□ 1.4
SNX13-206ENST00000474067 PALM3A6NDB9 673 aaPredicted RBP23.8■■□□□ 1.4
SNX13-206ENST00000474067 ZBTB5O15062 677 aa23.8■■□□□ 1.4
SNX13-206ENST00000474067 DDAH1O94760 285 aa23.8■■□□□ 1.4
SNX13-206ENST00000474067 GNAQP50148 359 aa23.8■■□□□ 1.4
SNX13-206ENST00000474067 FXR1P51114 621 aaKnown RBP eCLIP23.8■■□□□ 1.4
SNX13-206ENST00000474067 TRIM60Q495X7 471 aa23.8■■□□□ 1.4
SNX13-206ENST00000474067 SLC30A10Q6XR72 485 aa23.8■■□□□ 1.4
SNX13-206ENST00000474067 VTI1AQ96AJ9 217 aa23.8■■□□□ 1.4
SNX13-206ENST00000474067 LZTS2Q9BRK4 669 aa23.8■■□□□ 1.4
SNX13-206ENST00000474067 JMJD4Q9H9V9 463 aa23.8■■□□□ 1.4
SNX13-206ENST00000474067 A0A0U1RQG5 324 aaPredicted RBP23.79■■□□□ 1.4
SNX13-206ENST00000474067 CCDC69A6NI79 296 aa23.79■■□□□ 1.4
SNX13-206ENST00000474067 TLR3O15455 904 aaKnown RBP23.79■■□□□ 1.4
SNX13-206ENST00000474067 ASGR1P07306 291 aa23.79■■□□□ 1.4
SNX13-206ENST00000474067 NFXL1Q6ZNB6 911 aa23.79■■□□□ 1.4
SNX13-206ENST00000474067 FBXO16Q8IX29 292 aaPredicted RBP23.79■■□□□ 1.4
SNX13-206ENST00000474067 MB21D2Q8IYB1 491 aaPredicted RBP23.79■■□□□ 1.4
SNX13-206ENST00000474067 TDHQ8IZJ6 230 aa23.79■■□□□ 1.4
SNX13-206ENST00000474067 NSUN6Q8TEA1 469 aaKnown RBP23.79■■□□□ 1.4
SNX13-206ENST00000474067 IWS1Q96ST2 819 aa23.79■■□□□ 1.4
SNX13-206ENST00000474067 PRDM5Q9NQX1 630 aaPredicted RBP23.79■■□□□ 1.4
SNX13-206ENST00000474067 MAD2L2Q9UI95 211 aa23.79■■□□□ 1.4
SNX13-206ENST00000474067 CEP290O15078 2479 aa23.79■■□□□ 1.4
SNX13-206ENST00000474067 CLTBP09497 229 aa23.78■■□□□ 1.4
SNX13-206ENST00000474067 CPT1AP50416 773 aa23.78■■□□□ 1.4
SNX13-206ENST00000474067 KRT32Q14532 448 aa23.78■■□□□ 1.4
SNX13-206ENST00000474067 DUSP28Q4G0W2 176 aa23.78■■□□□ 1.4
SNX13-206ENST00000474067 SCFD2Q8WU76 684 aa23.78■■□□□ 1.4
SNX13-206ENST00000474067 LENG1Q96BZ8 264 aaPredicted RBP23.78■■□□□ 1.4
SNX13-206ENST00000474067 GNEQ9Y223 722 aaKnown RBP23.78■■□□□ 1.4
SNX13-206ENST00000474067 MYH6P13533 1939 aa23.78■■□□□ 1.4
SNX13-206ENST00000474067 SLC27A2O14975 620 aa23.77■■□□□ 1.4
SNX13-206ENST00000474067 PRC1O43663 620 aa23.77■■□□□ 1.4
SNX13-206ENST00000474067 SMARCA1P28370 1054 aa23.77■■□□□ 1.4
SNX13-206ENST00000474067 TROAPQ12815 778 aa23.77■■□□□ 1.4
SNX13-206ENST00000474067 PPP2R5BQ15173 497 aa23.77■■□□□ 1.4
SNX13-206ENST00000474067 CREB3L3Q68CJ9 461 aa23.77■■□□□ 1.4
SNX13-206ENST00000474067 CCSAPQ6IQ19 270 aaPredicted RBP23.77■■□□□ 1.4
SNX13-206ENST00000474067 SYNE3Q6ZMZ3 975 aa23.77■■□□□ 1.4
SNX13-206ENST00000474067 EEPD1Q7L9B9 569 aa23.77■■□□□ 1.4
SNX13-206ENST00000474067 ANKRD33Q7Z3H0 272 aa23.77■■□□□ 1.4
SNX13-206ENST00000474067 WDR11Q9BZH6 1224 aa23.77■■□□□ 1.4
SNX13-206ENST00000474067 CPVLQ9H3G5 476 aa23.77■■□□□ 1.4
SNX13-206ENST00000474067 PCDHA1Q9Y5I3 950 aa23.77■■□□□ 1.4
SNX13-206ENST00000474067 EDNRBP24530 442 aa23.76■■□□□ 1.39
SNX13-206ENST00000474067 LIFRP42702 1097 aa23.76■■□□□ 1.39
SNX13-206ENST00000474067 TLE2Q04725 743 aa23.76■■□□□ 1.39
SNX13-206ENST00000474067 TTLL4Q14679 1199 aa23.76■■□□□ 1.39
SNX13-206ENST00000474067 NECTIN1Q15223 517 aa23.76■■□□□ 1.39
SNX13-206ENST00000474067 FSCN1Q16658 493 aaKnown RBP23.76■■□□□ 1.39
SNX13-206ENST00000474067 TAPT1Q6NXT6 567 aa23.76■■□□□ 1.39
SNX13-206ENST00000474067 STAG2Q8N3U4 1231 aa23.76■■□□□ 1.39
SNX13-206ENST00000474067 IGDCC4Q8TDY8 1250 aa23.76■■□□□ 1.39
SNX13-206ENST00000474067 MTMR8Q96EF0 704 aa23.76■■□□□ 1.39
SNX13-206ENST00000474067 RIOX1Q9H6W3 641 aa23.76■■□□□ 1.39
SNX13-206ENST00000474067 POLR3EQ9NVU0 708 aa23.76■■□□□ 1.39
SNX13-206ENST00000474067 ASTN1O14525 1302 aa23.76■■□□□ 1.39
SNX13-206ENST00000474067 LRRC37A2A6NM11 1700 aa23.76■■□□□ 1.39
SNX13-206ENST00000474067 RBM47A0AV96 593 aaKnown RBP23.75■■□□□ 1.39
SNX13-206ENST00000474067 DYNC1LI2O43237 492 aaPredicted RBP23.75■■□□□ 1.39
SNX13-206ENST00000474067 KPNA6O60684 536 aa23.75■■□□□ 1.39
SNX13-206ENST00000474067 PQBP1O60828 265 aaKnown RBP23.75■■□□□ 1.39
SNX13-206ENST00000474067 HMGB1P09429 215 aaKnown RBP23.75■■□□□ 1.39
SNX13-206ENST00000474067 SMPD1P17405 629 aa23.75■■□□□ 1.39
SNX13-206ENST00000474067 STXBP2Q15833 593 aa23.75■■□□□ 1.39
SNX13-206ENST00000474067 ARHGEF16Q5VV41 709 aa23.75■■□□□ 1.39
SNX13-206ENST00000474067 ERICH6BQ5W0A0 696 aa23.75■■□□□ 1.39
SNX13-206ENST00000474067 STOX1Q6ZVD7 989 aa23.75■■□□□ 1.39
SNX13-206ENST00000474067 GPHNQ9NQX3 736 aaPredicted RBP23.75■■□□□ 1.39
SNX13-206ENST00000474067 PCDH10Q9P2E7 1040 aa23.75■■□□□ 1.39
SNX13-206ENST00000474067 SEC63Q9UGP8 760 aaKnown RBP23.75■■□□□ 1.39
SNX13-206ENST00000474067 PNMA6FA0A0J9YX94 578 aa23.74■■□□□ 1.39
SNX13-206ENST00000474067 CFBP00751 764 aa23.74■■□□□ 1.39
SNX13-206ENST00000474067 RAG1P15918 1043 aa23.74■■□□□ 1.39
SNX13-206ENST00000474067 MDM2Q00987 491 aaPredicted RBP23.74■■□□□ 1.39
SNX13-206ENST00000474067 LRIT3Q3SXY7 679 aa23.74■■□□□ 1.39
SNX13-206ENST00000474067 CHST3Q7LGC8 479 aa23.74■■□□□ 1.39
SNX13-206ENST00000474067 HOMER1Q86YM7 354 aa23.74■■□□□ 1.39
SNX13-206ENST00000474067 ZNF654Q8IZM8 581 aa23.74■■□□□ 1.39
SNX13-206ENST00000474067 RMDN3Q96TC7 470 aa23.74■■□□□ 1.39
SNX13-206ENST00000474067 PDLIM7Q9NR12 457 aa23.74■■□□□ 1.39
SNX13-206ENST00000474067 TMEM39AQ9NV64 488 aa23.74■■□□□ 1.39
SNX13-206ENST00000474067 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.73■■□□□ 1.39
SNX13-206ENST00000474067 ARVCFO00192 962 aa23.73■■□□□ 1.39
SNX13-206ENST00000474067 GHRHRQ02643 423 aa23.73■■□□□ 1.39
SNX13-206ENST00000474067 GPR153Q6NV75 609 aa23.73■■□□□ 1.39
SNX13-206ENST00000474067 SYTL5Q8TDW5 730 aaPredicted RBP23.73■■□□□ 1.39
SNX13-206ENST00000474067 RRP36Q96EU6 259 aaKnown RBP23.73■■□□□ 1.39
SNX13-206ENST00000474067 SPZ1Q9BXG8 430 aa23.73■■□□□ 1.39
SNX13-206ENST00000474067 LY9Q9HBG7 655 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms