RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 WNK3Q9BYP7 1800 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 TRPM2O94759 1503 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 RTL1A6NKG5 1358 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 A0A096LPE4 126 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 A0A1W2PPZ6 126 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 F6X3S4 739 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 PDLIM1O00151 329 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 PDE2AO00408 941 aaPredicted RBP5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 PPFIA3O75145 1194 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 TUBBP07437 444 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 SLC8A1P32418 973 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 TMED1Q13445 227 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 SLMAPQ14BN4 828 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 SYT9Q86SS6 491 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 TRIM42Q8IWZ5 723 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 FAM81AQ8TBF8 368 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 SPDL1Q96EA4 605 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 HOOK2Q96ED9 719 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 SPON2Q9BUD6 331 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 BICC1Q9H694 974 aaKnown RBP5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 CBX8Q9HC52 389 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 CD248Q9HCU0 757 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 TRMT1Q9NXH9 659 aaKnown RBP5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 CAPN7Q9Y6W3 813 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 GPR25O00155 361 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 C2CD2LO14523 706 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 OPA1O60313 960 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 TPP2P29144 1249 aaPredicted RBP5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 GBP2P32456 591 aaPredicted RBP5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 ATP11AP98196 1134 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 G3BP1Q13283 466 aaKnown RBP eCLIP5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 SNX1Q13596 522 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 VPS53Q5VIR6 699 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 ZNF468Q5VIY5 522 aaPredicted RBP5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 HFE2Q6ZVN8 426 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 B4GALNT4Q76KP1 1039 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 LUZP1Q86V48 1076 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 KIAA0825Q8IV33 1275 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 B4GALNT2Q8NHY0 566 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 AFAP1L1Q8TED9 768 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 TBC1D5Q92609 795 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 RHOVQ96L33 236 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 PARD6BQ9BYG5 372 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 CEP44Q9C0F1 390 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 GBP3Q9H0R5 595 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 KCNQ5Q9NR82 932 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 DNAJB12Q9NXW2 375 aaKnown RBP5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 IMPACTQ9P2X3 320 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 PRR12Q9ULL5 1215 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 RPGRIP1LQ68CZ1 1315 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 ZNF644Q9H582 1327 aaPredicted RBP5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 SHTN1A0MZ66 631 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 MINDY4BA8MYZ0 360 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 ENC1O14682 589 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 KIAA0754O94854 1291 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 CELA3AP09093 270 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 NBPF7P0C2Y1 421 aaPredicted RBP5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 PAX3P23760 479 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 EIF4A3P38919 411 aaKnown RBP5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 PCSK7Q16549 785 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 ACBD5Q5T8D3 534 aaPredicted RBP5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 SPTY2D1Q68D10 685 aaPredicted RBP5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 SLC30A9Q6PML9 568 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 TTLL7Q6ZT98 887 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 DPH6Q7L8W6 267 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 YTHDF3Q7Z739 585 aaKnown RBP5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 CCDC170Q8IYT3 715 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 CCDC150Q8NCX0 1101 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 PHC3Q8NDX5 983 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 LMBR1Q8WVP7 490 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 GOLGA1Q92805 767 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 DTNBP1Q96EV8 351 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 BICD1Q96G01 975 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 MPHOSPH8Q99549 860 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 TRIM7Q9C029 511 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 ZNF576Q9H609 170 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 KLC4Q9NSK0 619 aa5.79□□□□□ -1.48
TMEM39A-206ENST00000473684 MAP3K5Q99683 1374 aa5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 GOLGA6L10A6NI86 522 aa5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 A6NNZ2 444 aa5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 LIN7AO14910 233 aaPredicted RBP5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 SIN3BO75182 1162 aa5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 GCLCP48506 637 aaPredicted RBP5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 CDR1P51861 262 aa5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 ROR2Q01974 943 aaKnown RBP5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 RBL2Q08999 1139 aa5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 TUBB8Q3ZCM7 444 aa5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 RPS26P11Q5JNZ5 115 aaPredicted RBP5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 CWF19L1Q69YN2 538 aaKnown RBP5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 NANOS1Q8WY41 292 aaKnown RBP5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 NECAB3Q96P71 396 aaPredicted RBP5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 CARD6Q9BX69 1037 aa5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 OSBPL5Q9H0X9 879 aaPredicted RBP5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 NUP62CLQ9H1M0 184 aa5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 SEC31BQ9NQW1 1179 aa5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 ZBTB40Q9NUA8 1239 aa5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 TNNQ9UQP3 1299 aa5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 POLR3AO14802 1390 aaPredicted RBP5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 MSH6P52701 1360 aa5.78□□□□□ -1.48
TMEM39A-206ENST00000473684 TTC21BQ7Z4L5 1316 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms