RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 SIRT2Q8IXJ6 389 aa6.9□□□□□ -1.3
CNOT4-209ENST00000473470 CELF2-AS1Q8N7Q2 184 aa6.9□□□□□ -1.3
CNOT4-209ENST00000473470 NLGN2Q8NFZ4 835 aa6.9□□□□□ -1.3
CNOT4-209ENST00000473470 BTN2A2Q8WVV5 523 aa6.9□□□□□ -1.3
CNOT4-209ENST00000473470 SGSM3Q96HU1 749 aa6.9□□□□□ -1.3
CNOT4-209ENST00000473470 MMP19Q99542 508 aa6.9□□□□□ -1.3
CNOT4-209ENST00000473470 PPP1R1BQ9UD71 204 aaPredicted RBP6.9□□□□□ -1.3
CNOT4-209ENST00000473470 NPHS1O60500 1241 aa6.89□□□□□ -1.31
CNOT4-209ENST00000473470 CYBBP04839 570 aa6.89□□□□□ -1.31
CNOT4-209ENST00000473470 SCG5P05408 212 aa6.89□□□□□ -1.31
CNOT4-209ENST00000473470 HOXC12P31275 282 aa6.89□□□□□ -1.31
CNOT4-209ENST00000473470 GALK1P51570 392 aa6.89□□□□□ -1.31
CNOT4-209ENST00000473470 ACBD5Q5T8D3 534 aaPredicted RBP6.89□□□□□ -1.31
CNOT4-209ENST00000473470 LRRC47Q8N1G4 583 aaKnown RBP6.89□□□□□ -1.31
CNOT4-209ENST00000473470 MICAL1Q8TDZ2 1067 aa6.89□□□□□ -1.31
CNOT4-209ENST00000473470 MCOLN1Q9GZU1 580 aa6.89□□□□□ -1.31
CNOT4-209ENST00000473470 MYO1BO43795 1136 aa6.88□□□□□ -1.31
CNOT4-209ENST00000473470 THBDP07204 575 aa6.88□□□□□ -1.31
CNOT4-209ENST00000473470 SNRPB2P08579 225 aaKnown RBP6.88□□□□□ -1.31
CNOT4-209ENST00000473470 YBX1P67809 324 aaKnown RBP6.88□□□□□ -1.31
CNOT4-209ENST00000473470 MVKQ03426 396 aa6.88□□□□□ -1.31
CNOT4-209ENST00000473470 RAB3GAP1Q15042 981 aa6.88□□□□□ -1.31
CNOT4-209ENST00000473470 SOGA3Q5TF21 947 aa6.88□□□□□ -1.31
CNOT4-209ENST00000473470 BICRALQ6AI39 1079 aa6.88□□□□□ -1.31
CNOT4-209ENST00000473470 PAQR3Q6TCH7 311 aa6.88□□□□□ -1.31
CNOT4-209ENST00000473470 NETO2Q8NC67 525 aa6.88□□□□□ -1.31
CNOT4-209ENST00000473470 KRTAP4-12Q9BQ66 201 aa6.88□□□□□ -1.31
CNOT4-209ENST00000473470 SIRT5Q9NXA8 310 aa6.88□□□□□ -1.31
CNOT4-209ENST00000473470 SIRPGQ9P1W8 387 aa6.88□□□□□ -1.31
CNOT4-209ENST00000473470 NUDT5Q9UKK9 219 aa6.88□□□□□ -1.31
CNOT4-209ENST00000473470 MEFVO15553 781 aaPredicted RBP6.87□□□□□ -1.31
CNOT4-209ENST00000473470 DBHP09172 617 aa6.87□□□□□ -1.31
CNOT4-209ENST00000473470 PLS3P13797 630 aa6.87□□□□□ -1.31
CNOT4-209ENST00000473470 MAPKAPK2P49137 400 aa6.87□□□□□ -1.31
CNOT4-209ENST00000473470 GTF2A2P52657 109 aa6.87□□□□□ -1.31
CNOT4-209ENST00000473470 MAP4K2Q12851 820 aa6.87□□□□□ -1.31
CNOT4-209ENST00000473470 PLEKHN1Q494U1 663 aaPredicted RBP6.87□□□□□ -1.31
CNOT4-209ENST00000473470 TMEM132EQ6IEE7 984 aa6.87□□□□□ -1.31
CNOT4-209ENST00000473470 ZC3H14Q6PJT7 736 aaKnown RBP6.87□□□□□ -1.31
CNOT4-209ENST00000473470 LZTR1Q8N653 840 aa6.87□□□□□ -1.31
CNOT4-209ENST00000473470 SREK1Q8WXA9 508 aaKnown RBP6.87□□□□□ -1.31
CNOT4-209ENST00000473470 TOX2Q96NM4 488 aa6.87□□□□□ -1.31
CNOT4-209ENST00000473470 KRTAP9-2Q9BYQ4 174 aa6.87□□□□□ -1.31
CNOT4-209ENST00000473470 ST7Q9NRC1 585 aa6.87□□□□□ -1.31
CNOT4-209ENST00000473470 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.87□□□□□ -1.31
CNOT4-209ENST00000473470 CLEC1BQ9P126 229 aa6.87□□□□□ -1.31
CNOT4-209ENST00000473470 MSRB2Q9Y3D2 182 aa6.87□□□□□ -1.31
CNOT4-209ENST00000473470 DISP3Q9P2K9 1392 aa6.86□□□□□ -1.31
CNOT4-209ENST00000473470 DBX1A6NMT0 343 aa6.86□□□□□ -1.31
CNOT4-209ENST00000473470 NUDT19A8MXV4 375 aa6.86□□□□□ -1.31
CNOT4-209ENST00000473470 RFXAPO00287 272 aa6.86□□□□□ -1.31
CNOT4-209ENST00000473470 GTF2F1P35269 517 aaKnown RBP eCLIP6.86□□□□□ -1.31
CNOT4-209ENST00000473470 GFRA1P56159 465 aa6.86□□□□□ -1.31
CNOT4-209ENST00000473470 SRSF3P84103 164 aaKnown RBP6.86□□□□□ -1.31
CNOT4-209ENST00000473470 HSP90AA2PQ14568 343 aaPredicted RBP6.86□□□□□ -1.31
CNOT4-209ENST00000473470 CBX2Q14781 532 aaPredicted RBP6.86□□□□□ -1.31
CNOT4-209ENST00000473470 TESK1Q15569 626 aa6.86□□□□□ -1.31
CNOT4-209ENST00000473470 RPTNQ6XPR3 784 aa6.86□□□□□ -1.31
CNOT4-209ENST00000473470 NPLOC4Q8TAT6 608 aa6.86□□□□□ -1.31
CNOT4-209ENST00000473470 KCTD13Q8WZ19 329 aa6.86□□□□□ -1.31
CNOT4-209ENST00000473470 AARSD1Q9BTE6 412 aaKnown RBP6.86□□□□□ -1.31
CNOT4-209ENST00000473470 CD320Q9NPF0 282 aa6.86□□□□□ -1.31
CNOT4-209ENST00000473470 MYOCOSA0A1B0GUC4 107 aa6.85□□□□□ -1.31
CNOT4-209ENST00000473470 MSL3P1P0C860 447 aa6.85□□□□□ -1.31
CNOT4-209ENST00000473470 VIPR1P32241 457 aa6.85□□□□□ -1.31
CNOT4-209ENST00000473470 KCNJ6P48051 423 aa6.85□□□□□ -1.31
CNOT4-209ENST00000473470 RPL11P62913 178 aaKnown RBP6.85□□□□□ -1.31
CNOT4-209ENST00000473470 PPP2R2AP63151 447 aa6.85□□□□□ -1.31
CNOT4-209ENST00000473470 RASGRF1Q13972 1273 aa6.85□□□□□ -1.31
CNOT4-209ENST00000473470 WWC2Q6AWC2 1192 aa6.85□□□□□ -1.31
CNOT4-209ENST00000473470 TMC6Q7Z403 805 aa6.85□□□□□ -1.31
CNOT4-209ENST00000473470 ANKLE2Q86XL3 938 aa6.85□□□□□ -1.31
CNOT4-209ENST00000473470 DCP2Q8IU60 420 aaKnown RBP6.85□□□□□ -1.31
CNOT4-209ENST00000473470 PPIL6Q8IXY8 311 aa6.85□□□□□ -1.31
CNOT4-209ENST00000473470 FBXO41Q8TF61 875 aa6.85□□□□□ -1.31
CNOT4-209ENST00000473470 ETV2O00321 342 aaPredicted RBP6.84□□□□□ -1.31
CNOT4-209ENST00000473470 TBX1O43435 398 aa6.84□□□□□ -1.31
CNOT4-209ENST00000473470 IGSF3O75054 1194 aa6.84□□□□□ -1.31
CNOT4-209ENST00000473470 GLI4P10075 376 aa6.84□□□□□ -1.31
CNOT4-209ENST00000473470 TACR1P25103 407 aa6.84□□□□□ -1.31
CNOT4-209ENST00000473470 DLG4P78352 724 aa6.84□□□□□ -1.31
CNOT4-209ENST00000473470 KIR3DS1Q14943 382 aa6.84□□□□□ -1.31
CNOT4-209ENST00000473470 ATG14Q6ZNE5 492 aa6.84□□□□□ -1.31
CNOT4-209ENST00000473470 LRP10Q7Z4F1 713 aa6.84□□□□□ -1.31
CNOT4-209ENST00000473470 CPNE8Q86YQ8 564 aa6.84□□□□□ -1.31
CNOT4-209ENST00000473470 KRTAP19-1Q8IUB9 90 aa6.84□□□□□ -1.31
CNOT4-209ENST00000473470 ZSCAN18Q8TBC5 510 aaPredicted RBP6.84□□□□□ -1.31
CNOT4-209ENST00000473470 DIO2Q92813 273 aa6.84□□□□□ -1.31
CNOT4-209ENST00000473470 KCNN1Q92952 543 aa6.84□□□□□ -1.31
CNOT4-209ENST00000473470 PEX11GQ96HA9 241 aa6.84□□□□□ -1.31
CNOT4-209ENST00000473470 KLHL14Q9P2G3 628 aa6.84□□□□□ -1.31
CNOT4-209ENST00000473470 MBD1Q9UIS9 605 aaPredicted RBP6.84□□□□□ -1.31
CNOT4-209ENST00000473470 DBR1Q9UK59 544 aaKnown RBP6.84□□□□□ -1.31
CNOT4-209ENST00000473470 RWDD3Q9Y3V2 267 aa6.84□□□□□ -1.31
CNOT4-209ENST00000473470 A0A1W2PQU0 124 aa6.83□□□□□ -1.32
CNOT4-209ENST00000473470 C7orf72A4D263 438 aa6.83□□□□□ -1.32
CNOT4-209ENST00000473470 PDPK1O15530 556 aa6.83□□□□□ -1.32
CNOT4-209ENST00000473470 C1QTNF9P0C862 333 aa6.83□□□□□ -1.32
CNOT4-209ENST00000473470 LTBRP36941 435 aa6.83□□□□□ -1.32
CNOT4-209ENST00000473470 ECI1P42126 302 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms