RNA–Protein interactions for RNA: ENST00000473086.3

ATP1A3-205, Transcript of ATPase Na+/K+ transporting subunit alpha 3, human

TSL 5

Gene ATP1A3, Length 889 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP1A3-205	ENST00000473086	CYB5R4	Q7L1T6	521 aa		18.83	■□□□□ 0.6
ATP1A3-205	ENST00000473086	TLK2	Q86UE8	772 aa		18.83	■□□□□ 0.6
ATP1A3-205	ENST00000473086	MORC4	Q8TE76	937 aa		18.83	■□□□□ 0.6
ATP1A3-205	ENST00000473086	NUP133	Q8WUM0	1156 aa		18.83	■□□□□ 0.6
ATP1A3-205	ENST00000473086	CDH23	Q9H251	3354 aa		18.82	■□□□□ 0.6
ATP1A3-205	ENST00000473086	FAAP100	Q0VG06	881 aa		18.82	■□□□□ 0.6
ATP1A3-205	ENST00000473086	CDC37	Q16543	378 aa	Predicted RBP	18.82	■□□□□ 0.6
ATP1A3-205	ENST00000473086	ANKRD33	Q7Z3H0	272 aa		18.82	■□□□□ 0.6
ATP1A3-205	ENST00000473086	KRT23	Q9C075	422 aa		18.82	■□□□□ 0.6
ATP1A3-205	ENST00000473086	SPC25	Q9HBM1	224 aa		18.82	■□□□□ 0.6
ATP1A3-205	ENST00000473086	KIAA0355	O15063	1070 aa		18.81	■□□□□ 0.6
ATP1A3-205	ENST00000473086	CYP21A2	P08686	494 aa		18.81	■□□□□ 0.6
ATP1A3-205	ENST00000473086	EPHB4	P54760	987 aa		18.81	■□□□□ 0.6
ATP1A3-205	ENST00000473086	NKX3-2	P78367	333 aa		18.81	■□□□□ 0.6
ATP1A3-205	ENST00000473086	SEC23A	Q15436	765 aa		18.81	■□□□□ 0.6
ATP1A3-205	ENST00000473086	CCDC178	Q5BJE1	867 aa		18.81	■□□□□ 0.6
ATP1A3-205	ENST00000473086	RNF207	Q6ZRF8	634 aa		18.81	■□□□□ 0.6
ATP1A3-205	ENST00000473086	PCSK9	Q8NBP7	692 aa	Known RBP	18.81	■□□□□ 0.6
ATP1A3-205	ENST00000473086	GLT1D1	Q96MS3	346 aa		18.81	■□□□□ 0.6
ATP1A3-205	ENST00000473086	UBAC1	Q9BSL1	405 aa		18.81	■□□□□ 0.6
ATP1A3-205	ENST00000473086	CNNM2	Q9H8M5	875 aa		18.81	■□□□□ 0.6
ATP1A3-205	ENST00000473086	TMEM265	A0A087WTH1	108 aa		18.8	■□□□□ 0.6
ATP1A3-205	ENST00000473086	COL9A1	P20849	921 aa		18.8	■□□□□ 0.6
ATP1A3-205	ENST00000473086	NT5C2	P49902	561 aa		18.8	■□□□□ 0.6
ATP1A3-205	ENST00000473086	RPS6	P62753	249 aa	Known RBP	18.8	■□□□□ 0.6
ATP1A3-205	ENST00000473086	FSCN1	Q16658	493 aa	Known RBP	18.8	■□□□□ 0.6
ATP1A3-205	ENST00000473086	ASPRV1	Q53RT3	343 aa		18.8	■□□□□ 0.6
ATP1A3-205	ENST00000473086	CXCL17	Q6UXB2	119 aa		18.8	■□□□□ 0.6
ATP1A3-205	ENST00000473086	SKAP1	Q86WV1	359 aa		18.8	■□□□□ 0.6
ATP1A3-205	ENST00000473086	ADGRF4	Q8IZF3	695 aa		18.8	■□□□□ 0.6
ATP1A3-205	ENST00000473086	STAG2	Q8N3U4	1231 aa		18.8	■□□□□ 0.6
ATP1A3-205	ENST00000473086	VTA1	Q9NP79	307 aa		18.8	■□□□□ 0.6
ATP1A3-205	ENST00000473086	TMEM39A	Q9NV64	488 aa		18.8	■□□□□ 0.6
ATP1A3-205	ENST00000473086	BAZ2B	Q9UIF8	2168 aa	Known RBP	18.79	■□□□□ 0.6
ATP1A3-205	ENST00000473086	MUC3A	Q02505	3323 aa		18.79	■□□□□ 0.6
ATP1A3-205	ENST00000473086	ELP1	O95163	1332 aa		18.79	■□□□□ 0.6
ATP1A3-205	ENST00000473086	SGSM2	O43147	1006 aa		18.79	■□□□□ 0.6
ATP1A3-205	ENST00000473086	DYNC1LI2	O43237	492 aa	Predicted RBP	18.79	■□□□□ 0.6
ATP1A3-205	ENST00000473086	CDK7	P50613	346 aa		18.79	■□□□□ 0.6
ATP1A3-205	ENST00000473086	IFIT1B	Q5T764	474 aa	Known RBP	18.79	■□□□□ 0.6
ATP1A3-205	ENST00000473086	KIAA1211	Q6ZU35	1233 aa		18.79	■□□□□ 0.6
ATP1A3-205	ENST00000473086	STOX1	Q6ZVD7	989 aa		18.79	■□□□□ 0.6
ATP1A3-205	ENST00000473086	TBC1D5	Q92609	795 aa		18.79	■□□□□ 0.6
ATP1A3-205	ENST00000473086	VTI1A	Q96AJ9	217 aa		18.79	■□□□□ 0.6
ATP1A3-205	ENST00000473086	TOX2	Q96NM4	488 aa		18.79	■□□□□ 0.6
ATP1A3-205	ENST00000473086	SENP2	Q9HC62	589 aa		18.79	■□□□□ 0.6
ATP1A3-205	ENST00000473086	ADD3	Q9UEY8	706 aa	Known RBP	18.79	■□□□□ 0.6
ATP1A3-205	ENST00000473086	TBX21	Q9UL17	535 aa		18.79	■□□□□ 0.6
ATP1A3-205	ENST00000473086	KIAA1217	Q5T5P2	1943 aa		18.78	■□□□□ 0.6
ATP1A3-205	ENST00000473086		A0A0U1RQG5	324 aa	Predicted RBP	18.78	■□□□□ 0.6
ATP1A3-205	ENST00000473086	DCDC2C	A8MYV0	355 aa		18.78	■□□□□ 0.6
ATP1A3-205	ENST00000473086	ARVCF	O00192	962 aa		18.78	■□□□□ 0.6
ATP1A3-205	ENST00000473086	PARP1	P09874	1014 aa	Known RBP	18.78	■□□□□ 0.6
ATP1A3-205	ENST00000473086	RAG1	P15918	1043 aa		18.78	■□□□□ 0.6
ATP1A3-205	ENST00000473086	QRICH1	Q2TAL8	776 aa		18.78	■□□□□ 0.6
ATP1A3-205	ENST00000473086	TJAP1	Q5JTD0	557 aa		18.78	■□□□□ 0.6
ATP1A3-205	ENST00000473086	IQSEC1	Q6DN90	963 aa		18.78	■□□□□ 0.6
ATP1A3-205	ENST00000473086	RUFY2	Q8WXA3	655 aa		18.78	■□□□□ 0.6
ATP1A3-205	ENST00000473086	JMJD4	Q9H9V9	463 aa		18.78	■□□□□ 0.6
ATP1A3-205	ENST00000473086	TNFRSF10A	O00220	468 aa		18.77	■□□□□ 0.6
ATP1A3-205	ENST00000473086	EDNRB	P24530	442 aa		18.77	■□□□□ 0.6
ATP1A3-205	ENST00000473086	SLC35G1	Q2M3R5	365 aa		18.77	■□□□□ 0.6
ATP1A3-205	ENST00000473086	FAM126B	Q8IXS8	530 aa		18.77	■□□□□ 0.6
ATP1A3-205	ENST00000473086	AP5M1	Q9H0R1	490 aa		18.77	■□□□□ 0.6
ATP1A3-205	ENST00000473086	VAT1L	Q9HCJ6	419 aa		18.77	■□□□□ 0.6
ATP1A3-205	ENST00000473086	COL20A1	Q9P218	1284 aa		18.77	■□□□□ 0.6
ATP1A3-205	ENST00000473086	PNMA2	Q9UL42	364 aa		18.77	■□□□□ 0.6
ATP1A3-205	ENST00000473086	GRIN2D	O15399	1336 aa		18.76	■□□□□ 0.59
ATP1A3-205	ENST00000473086	DHX16	O60231	1041 aa	Known RBP	18.76	■□□□□ 0.59
ATP1A3-205	ENST00000473086	PSMC6	P62333	389 aa		18.76	■□□□□ 0.59
ATP1A3-205	ENST00000473086	DUSP28	Q4G0W2	176 aa		18.76	■□□□□ 0.59
ATP1A3-205	ENST00000473086	CHST3	Q7LGC8	479 aa		18.76	■□□□□ 0.59
ATP1A3-205	ENST00000473086	WDR11	Q9BZH6	1224 aa		18.76	■□□□□ 0.59
ATP1A3-205	ENST00000473086	MAD2L2	Q9UI95	211 aa		18.76	■□□□□ 0.59
ATP1A3-205	ENST00000473086		U3KPZ7	1027 aa	Predicted RBP	18.76	■□□□□ 0.59
ATP1A3-205	ENST00000473086	ABCB11	O95342	1321 aa		18.75	■□□□□ 0.59
ATP1A3-205	ENST00000473086	MROH7	Q68CQ1	1323 aa		18.75	■□□□□ 0.59
ATP1A3-205	ENST00000473086	RBM47	A0AV96	593 aa	Known RBP	18.75	■□□□□ 0.59
ATP1A3-205	ENST00000473086		E7EWF7	191 aa		18.75	■□□□□ 0.59
ATP1A3-205	ENST00000473086	PPP1R11	O60927	126 aa	Predicted RBP	18.75	■□□□□ 0.59
ATP1A3-205	ENST00000473086	PDE4D	Q08499	809 aa		18.75	■□□□□ 0.59
ATP1A3-205	ENST00000473086	COPS5	Q92905	334 aa		18.75	■□□□□ 0.59
ATP1A3-205	ENST00000473086	RNPC3	Q96LT9	517 aa	Known RBP	18.75	■□□□□ 0.59
ATP1A3-205	ENST00000473086	SCN10A	Q9Y5Y9	1956 aa		18.75	■□□□□ 0.59
ATP1A3-205	ENST00000473086	LOC102724159	A0A0B4J2E5	919 aa		18.74	■□□□□ 0.59
ATP1A3-205	ENST00000473086	OPLAH	O14841	1288 aa		18.74	■□□□□ 0.59
ATP1A3-205	ENST00000473086	TIMP1	P01033	207 aa		18.74	■□□□□ 0.59
ATP1A3-205	ENST00000473086	ANTXR2	P58335	489 aa		18.74	■□□□□ 0.59
ATP1A3-205	ENST00000473086	FPGS	Q05932	587 aa		18.74	■□□□□ 0.59
ATP1A3-205	ENST00000473086	TRDN	Q13061	729 aa		18.74	■□□□□ 0.59
ATP1A3-205	ENST00000473086	COL9A3	Q14050	684 aa	Predicted RBP	18.74	■□□□□ 0.59
ATP1A3-205	ENST00000473086	PWP2	Q15269	919 aa	Known RBP	18.74	■□□□□ 0.59
ATP1A3-205	ENST00000473086	FBXO11	Q86XK2	927 aa		18.74	■□□□□ 0.59
ATP1A3-205	ENST00000473086	SLC43A3	Q8NBI5	491 aa		18.74	■□□□□ 0.59
ATP1A3-205	ENST00000473086	DNER	Q8NFT8	737 aa		18.74	■□□□□ 0.59
ATP1A3-205	ENST00000473086	SYTL5	Q8TDW5	730 aa	Predicted RBP	18.74	■□□□□ 0.59
ATP1A3-205	ENST00000473086	TAAR1	Q96RJ0	339 aa		18.74	■□□□□ 0.59
ATP1A3-205	ENST00000473086	PPP1R12C	Q9BZL4	782 aa		18.74	■□□□□ 0.59
ATP1A3-205	ENST00000473086		Q9Y3F1	56 aa		18.74	■□□□□ 0.59
ATP1A3-205	ENST00000473086	RBM8A	Q9Y5S9	174 aa	Known RBP	18.74	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms