RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	SMPD1	P17405	629 aa		10.44	□□□□□ -0.74
CHEK2-223	ENST00000472807	CALML3	P27482	149 aa		10.44	□□□□□ -0.74
CHEK2-223	ENST00000472807	PDE4A	P27815	886 aa		10.44	□□□□□ -0.74
CHEK2-223	ENST00000472807	ALDH5A1	P51649	535 aa	Predicted RBP	10.44	□□□□□ -0.74
CHEK2-223	ENST00000472807	NKX3-2	P78367	333 aa		10.44	□□□□□ -0.74
CHEK2-223	ENST00000472807	IRX5	P78411	483 aa	Predicted RBP	10.44	□□□□□ -0.74
CHEK2-223	ENST00000472807	IRX6	P78412	446 aa	Predicted RBP	10.44	□□□□□ -0.74
CHEK2-223	ENST00000472807	FPGS	Q05932	587 aa		10.44	□□□□□ -0.74
CHEK2-223	ENST00000472807	FAAP100	Q0VG06	881 aa		10.44	□□□□□ -0.74
CHEK2-223	ENST00000472807	SHH	Q15465	462 aa		10.44	□□□□□ -0.74
CHEK2-223	ENST00000472807	ASPRV1	Q53RT3	343 aa		10.44	□□□□□ -0.74
CHEK2-223	ENST00000472807	IQSEC1	Q6DN90	963 aa		10.44	□□□□□ -0.74
CHEK2-223	ENST00000472807	SLC30A10	Q6XR72	485 aa		10.44	□□□□□ -0.74
CHEK2-223	ENST00000472807	RNF207	Q6ZRF8	634 aa		10.44	□□□□□ -0.74
CHEK2-223	ENST00000472807	ENAH	Q8N8S7	591 aa	Predicted RBP	10.44	□□□□□ -0.74
CHEK2-223	ENST00000472807	MORC4	Q8TE76	937 aa		10.44	□□□□□ -0.74
CHEK2-223	ENST00000472807	PURB	Q96QR8	312 aa	Known RBP	10.44	□□□□□ -0.74
CHEK2-223	ENST00000472807	GNE	Q9Y223	722 aa	Known RBP	10.44	□□□□□ -0.74
CHEK2-223	ENST00000472807	DDX49	Q9Y6V7	483 aa	Known RBP	10.44	□□□□□ -0.74
CHEK2-223	ENST00000472807		B4DLN1	442 aa		10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	ARVCF	O00192	962 aa		10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	CTAGE5	O15320	804 aa		10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	DYNC1LI2	O43237	492 aa	Predicted RBP	10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	DHX16	O60231	1041 aa	Known RBP	10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	PARP1	P09874	1014 aa	Known RBP	10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	ITGB8	P26012	769 aa		10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	MRPL12	P52815	198 aa	Known RBP	10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	RPS6	P62753	249 aa	Known RBP	10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	BEX3	Q00994	111 aa		10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	PDE4D	Q08499	809 aa		10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	TRDN	Q13061	729 aa		10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	CDC37	Q16543	378 aa	Predicted RBP	10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	USH1G	Q495M9	461 aa		10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	C9orf50	Q5SZB4	431 aa		10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	IFIT1B	Q5T764	474 aa	Known RBP	10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	FAM109B	Q6ICB4	259 aa	Predicted RBP	10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	TAPT1	Q6NXT6	567 aa		10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	KIAA1211	Q6ZU35	1233 aa		10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	DNER	Q8NFT8	737 aa		10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	SPDYE1	Q8NFV5	336 aa	Predicted RBP	10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	CLEC4D	Q8WXI8	215 aa		10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	ANKS1A	Q92625	1134 aa		10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	RNPC3	Q96LT9	517 aa	Known RBP	10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	UBA5	Q9GZZ9	404 aa		10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	PDGFC	Q9NRA1	345 aa		10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	ZSWIM5	Q9P217	1185 aa		10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	TBX21	Q9UL17	535 aa		10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807		Q9Y3F1	56 aa		10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	MYH6	P13533	1939 aa		10.43	□□□□□ -0.74
CHEK2-223	ENST00000472807	ABCB11	O95342	1321 aa		10.42	□□□□□ -0.74
CHEK2-223	ENST00000472807	TIMP1	P01033	207 aa		10.42	□□□□□ -0.74
CHEK2-223	ENST00000472807	CDK7	P50613	346 aa		10.42	□□□□□ -0.74
CHEK2-223	ENST00000472807	DUSP28	Q4G0W2	176 aa		10.42	□□□□□ -0.74
CHEK2-223	ENST00000472807	ZNF697	Q5TEC3	545 aa		10.42	□□□□□ -0.74
CHEK2-223	ENST00000472807	CXCL17	Q6UXB2	119 aa		10.42	□□□□□ -0.74
CHEK2-223	ENST00000472807	ADGRF4	Q8IZF3	695 aa		10.42	□□□□□ -0.74
CHEK2-223	ENST00000472807	RGS22	Q8NE09	1264 aa		10.42	□□□□□ -0.74
CHEK2-223	ENST00000472807	SEZ6L	Q9BYH1	1024 aa		10.42	□□□□□ -0.74
CHEK2-223	ENST00000472807	WDR11	Q9BZH6	1224 aa		10.42	□□□□□ -0.74
CHEK2-223	ENST00000472807	MAF1	Q9H063	256 aa		10.42	□□□□□ -0.74
CHEK2-223	ENST00000472807	IL25	Q9H293	177 aa		10.42	□□□□□ -0.74
CHEK2-223	ENST00000472807	CPVL	Q9H3G5	476 aa		10.42	□□□□□ -0.74
CHEK2-223	ENST00000472807	MTMR10	Q9NXD2	777 aa		10.42	□□□□□ -0.74
CHEK2-223	ENST00000472807	STXBP5L	Q9Y2K9	1186 aa		10.42	□□□□□ -0.74
CHEK2-223	ENST00000472807	VCAN	P13611	3396 aa		10.42	□□□□□ -0.74
CHEK2-223	ENST00000472807	EDNRB	P24530	442 aa		10.41	□□□□□ -0.74
CHEK2-223	ENST00000472807	CHML	P26374	656 aa		10.41	□□□□□ -0.74
CHEK2-223	ENST00000472807	CPT1A	P50416	773 aa		10.41	□□□□□ -0.74
CHEK2-223	ENST00000472807	SMAD3	P84022	425 aa	Known RBP	10.41	□□□□□ -0.74
CHEK2-223	ENST00000472807	ITGA7	Q13683	1181 aa		10.41	□□□□□ -0.74
CHEK2-223	ENST00000472807	PPP2R5B	Q15173	497 aa		10.41	□□□□□ -0.74
CHEK2-223	ENST00000472807	BRDT	Q58F21	947 aa	Predicted RBP	10.41	□□□□□ -0.74
CHEK2-223	ENST00000472807	MFSD5	Q6N075	450 aa		10.41	□□□□□ -0.74
CHEK2-223	ENST00000472807	RALYL	Q86SE5	291 aa	Known RBP	10.41	□□□□□ -0.74
CHEK2-223	ENST00000472807	MCF2L2	Q86YR7	1114 aa		10.41	□□□□□ -0.74
CHEK2-223	ENST00000472807	FAM126B	Q8IXS8	530 aa		10.41	□□□□□ -0.74
CHEK2-223	ENST00000472807	TMEM199	Q8N511	208 aa		10.41	□□□□□ -0.74
CHEK2-223	ENST00000472807	RBM47	A0AV96	593 aa	Known RBP	10.4	□□□□□ -0.74
CHEK2-223	ENST00000472807	ERICH2	A1L162	156 aa		10.4	□□□□□ -0.74
CHEK2-223	ENST00000472807	NKRF	O15226	690 aa	Known RBP eCLIP	10.4	□□□□□ -0.74
CHEK2-223	ENST00000472807	PTGS1	P23219	599 aa		10.4	□□□□□ -0.74
CHEK2-223	ENST00000472807	EPHB4	P54760	987 aa		10.4	□□□□□ -0.74
CHEK2-223	ENST00000472807	PPIG	Q13427	754 aa	Known RBP eCLIP	10.4	□□□□□ -0.74
CHEK2-223	ENST00000472807	SART3	Q15020	963 aa	Known RBP	10.4	□□□□□ -0.74
CHEK2-223	ENST00000472807	QRICH1	Q2TAL8	776 aa		10.4	□□□□□ -0.74
CHEK2-223	ENST00000472807	FBXO11	Q86XK2	927 aa		10.4	□□□□□ -0.74
CHEK2-223	ENST00000472807	SLC43A3	Q8NBI5	491 aa		10.4	□□□□□ -0.74
CHEK2-223	ENST00000472807	SLC17A8	Q8NDX2	589 aa		10.4	□□□□□ -0.74
CHEK2-223	ENST00000472807	OR6J1	Q8NGC5	347 aa		10.4	□□□□□ -0.74
CHEK2-223	ENST00000472807	SCFD2	Q8WU76	684 aa		10.4	□□□□□ -0.74
CHEK2-223	ENST00000472807	FAM161B	Q96MY7	647 aa		10.4	□□□□□ -0.74
CHEK2-223	ENST00000472807	PPP1R12C	Q9BZL4	782 aa		10.4	□□□□□ -0.74
CHEK2-223	ENST00000472807	GPHN	Q9NQX3	736 aa	Predicted RBP	10.4	□□□□□ -0.74
CHEK2-223	ENST00000472807	POLR3E	Q9NVU0	708 aa		10.4	□□□□□ -0.74
CHEK2-223	ENST00000472807	MRPL11	Q9Y3B7	192 aa	Known RBP	10.4	□□□□□ -0.74
CHEK2-223	ENST00000472807	CHD9	Q3L8U1	2897 aa		10.4	□□□□□ -0.75
CHEK2-223	ENST00000472807	SGSM2	O43147	1006 aa		10.39	□□□□□ -0.75
CHEK2-223	ENST00000472807	CD4	P01730	458 aa		10.39	□□□□□ -0.75
CHEK2-223	ENST00000472807	PSMC6	P62333	389 aa		10.39	□□□□□ -0.75
CHEK2-223	ENST00000472807	PTH1R	Q03431	593 aa		10.39	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms