RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 ASGR1P07306 291 aa22.59■■□□□ 1.21
COMMD1-208ENST00000472729 CST5P28325 142 aaPredicted RBP22.59■■□□□ 1.21
COMMD1-208ENST00000472729 BRDTQ58F21 947 aaPredicted RBP22.59■■□□□ 1.21
COMMD1-208ENST00000472729 CREB3L3Q68CJ9 461 aa22.59■■□□□ 1.21
COMMD1-208ENST00000472729 STOX1Q6ZVD7 989 aa22.59■■□□□ 1.21
COMMD1-208ENST00000472729 KLHDC9Q8NEP7 349 aa22.59■■□□□ 1.21
COMMD1-208ENST00000472729 MTA3Q9BTC8 594 aa22.59■■□□□ 1.21
COMMD1-208ENST00000472729 KATNBL1Q9H079 304 aa22.59■■□□□ 1.21
COMMD1-208ENST00000472729 MAD2L2Q9UI95 211 aa22.59■■□□□ 1.21
COMMD1-208ENST00000472729 PALM3A6NDB9 673 aaPredicted RBP22.58■■□□□ 1.21
COMMD1-208ENST00000472729 FXR1P51114 621 aaKnown RBP eCLIP22.58■■□□□ 1.21
COMMD1-208ENST00000472729 TLE2Q04725 743 aa22.58■■□□□ 1.21
COMMD1-208ENST00000472729 GRM4Q14833 912 aa22.58■■□□□ 1.21
COMMD1-208ENST00000472729 MB21D2Q8IYB1 491 aaPredicted RBP22.58■■□□□ 1.21
COMMD1-208ENST00000472729 NSUN6Q8TEA1 469 aaKnown RBP22.58■■□□□ 1.21
COMMD1-208ENST00000472729 TMEM87BQ96K49 555 aa22.58■■□□□ 1.21
COMMD1-208ENST00000472729 WDR11Q9BZH6 1224 aa22.58■■□□□ 1.21
COMMD1-208ENST00000472729 UPF3AQ9H1J1 476 aaKnown RBP22.58■■□□□ 1.21
COMMD1-208ENST00000472729 PDGFCQ9NRA1 345 aa22.58■■□□□ 1.21
COMMD1-208ENST00000472729 Q9Y3F1 56 aa22.58■■□□□ 1.21
COMMD1-208ENST00000472729 PCDHA1Q9Y5I3 950 aa22.58■■□□□ 1.21
COMMD1-208ENST00000472729 TAF6LQ9Y6J9 622 aa22.58■■□□□ 1.21
COMMD1-208ENST00000472729 ELP1O95163 1332 aa22.57■■□□□ 1.2
COMMD1-208ENST00000472729 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.57■■□□□ 1.2
COMMD1-208ENST00000472729 CFBP00751 764 aa22.57■■□□□ 1.2
COMMD1-208ENST00000472729 SMPD1P17405 629 aa22.57■■□□□ 1.2
COMMD1-208ENST00000472729 SNX17Q15036 470 aa22.57■■□□□ 1.2
COMMD1-208ENST00000472729 FSCN1Q16658 493 aaKnown RBP22.57■■□□□ 1.2
COMMD1-208ENST00000472729 SYNE3Q6ZMZ3 975 aa22.57■■□□□ 1.2
COMMD1-208ENST00000472729 IGDCC4Q8TDY8 1250 aa22.57■■□□□ 1.2
COMMD1-208ENST00000472729 MORC4Q8TE76 937 aa22.57■■□□□ 1.2
COMMD1-208ENST00000472729 PRO3102Q9H379 93 aa22.57■■□□□ 1.2
COMMD1-208ENST00000472729 DDX49Q9Y6V7 483 aaKnown RBP22.57■■□□□ 1.2
COMMD1-208ENST00000472729 CEP290O15078 2479 aa22.57■■□□□ 1.2
COMMD1-208ENST00000472729 ASTN1O14525 1302 aa22.57■■□□□ 1.2
COMMD1-208ENST00000472729 MROH7Q68CQ1 1323 aa22.57■■□□□ 1.2
COMMD1-208ENST00000472729 MYADML2A6NDP7 307 aa22.56■■□□□ 1.2
COMMD1-208ENST00000472729 CABYRO75952 493 aa22.56■■□□□ 1.2
COMMD1-208ENST00000472729 DDAH1O94760 285 aa22.56■■□□□ 1.2
COMMD1-208ENST00000472729 CLTBP09497 229 aa22.56■■□□□ 1.2
COMMD1-208ENST00000472729 ARHGEF16Q5VV41 709 aa22.56■■□□□ 1.2
COMMD1-208ENST00000472729 TAPT1Q6NXT6 567 aa22.56■■□□□ 1.2
COMMD1-208ENST00000472729 TDHQ8IZJ6 230 aa22.56■■□□□ 1.2
COMMD1-208ENST00000472729 RMDN3Q96TC7 470 aa22.56■■□□□ 1.2
COMMD1-208ENST00000472729 GPHNQ9NQX3 736 aaPredicted RBP22.56■■□□□ 1.2
COMMD1-208ENST00000472729 TMEM39AQ9NV64 488 aa22.56■■□□□ 1.2
COMMD1-208ENST00000472729 A0A0U1RQG5 324 aaPredicted RBP22.55■■□□□ 1.2
COMMD1-208ENST00000472729 ADCY6O43306 1168 aa22.55■■□□□ 1.2
COMMD1-208ENST00000472729 CALM1P0DP23 149 aa22.55■■□□□ 1.2
COMMD1-208ENST00000472729 CALM2P0DP24 149 aa22.55■■□□□ 1.2
COMMD1-208ENST00000472729 CALM3P0DP25 149 aa22.55■■□□□ 1.2
COMMD1-208ENST00000472729 GNAQP50148 359 aa22.55■■□□□ 1.2
COMMD1-208ENST00000472729 BEX3Q00994 111 aa22.55■■□□□ 1.2
COMMD1-208ENST00000472729 TROAPQ12815 778 aa22.55■■□□□ 1.2
COMMD1-208ENST00000472729 PPP2R5BQ15173 497 aa22.55■■□□□ 1.2
COMMD1-208ENST00000472729 NECTIN1Q15223 517 aa22.55■■□□□ 1.2
COMMD1-208ENST00000472729 DUSP28Q4G0W2 176 aa22.55■■□□□ 1.2
COMMD1-208ENST00000472729 SCFD2Q8WU76 684 aa22.55■■□□□ 1.2
COMMD1-208ENST00000472729 LZTS2Q9BRK4 669 aa22.55■■□□□ 1.2
COMMD1-208ENST00000472729 SEC63Q9UGP8 760 aaKnown RBP22.55■■□□□ 1.2
COMMD1-208ENST00000472729 GNEQ9Y223 722 aaKnown RBP22.55■■□□□ 1.2
COMMD1-208ENST00000472729 SLC12A7Q9Y666 1083 aa22.55■■□□□ 1.2
COMMD1-208ENST00000472729 PNMA6FA0A0J9YX94 578 aa22.54■■□□□ 1.2
COMMD1-208ENST00000472729 TLR3O15455 904 aaKnown RBP22.54■■□□□ 1.2
COMMD1-208ENST00000472729 RAG1P15918 1043 aa22.54■■□□□ 1.2
COMMD1-208ENST00000472729 CPT1AP50416 773 aa22.54■■□□□ 1.2
COMMD1-208ENST00000472729 ANTXR2P58335 489 aa22.54■■□□□ 1.2
COMMD1-208ENST00000472729 STXBP2Q15833 593 aa22.54■■□□□ 1.2
COMMD1-208ENST00000472729 CCSAPQ6IQ19 270 aaPredicted RBP22.54■■□□□ 1.2
COMMD1-208ENST00000472729 ZNF654Q8IZM8 581 aa22.54■■□□□ 1.2
COMMD1-208ENST00000472729 SYTL5Q8TDW5 730 aaPredicted RBP22.54■■□□□ 1.2
COMMD1-208ENST00000472729 RRP36Q96EU6 259 aaKnown RBP22.54■■□□□ 1.2
COMMD1-208ENST00000472729 PIGSQ96S52 555 aa22.54■■□□□ 1.2
COMMD1-208ENST00000472729 IWS1Q96ST2 819 aa22.54■■□□□ 1.2
COMMD1-208ENST00000472729 MAP3K14Q99558 947 aa22.54■■□□□ 1.2
COMMD1-208ENST00000472729 LY9Q9HBG7 655 aa22.54■■□□□ 1.2
COMMD1-208ENST00000472729 SENP2Q9HC62 589 aa22.54■■□□□ 1.2
COMMD1-208ENST00000472729 MAP3K20Q9NYL2 800 aaKnown RBP22.54■■□□□ 1.2
COMMD1-208ENST00000472729 LAMA4Q16363 1823 aa22.54■■□□□ 1.2
COMMD1-208ENST00000472729 NKRFO15226 690 aaKnown RBP eCLIP22.53■■□□□ 1.2
COMMD1-208ENST00000472729 FGD1P98174 961 aa22.53■■□□□ 1.2
COMMD1-208ENST00000472729 KRT32Q14532 448 aa22.53■■□□□ 1.2
COMMD1-208ENST00000472729 TTLL4Q14679 1199 aa22.53■■□□□ 1.2
COMMD1-208ENST00000472729 PIBF1Q8WXW3 757 aa22.53■■□□□ 1.2
COMMD1-208ENST00000472729 TOX2Q96NM4 488 aa22.53■■□□□ 1.2
COMMD1-208ENST00000472729 NEK1Q96PY6 1258 aa22.53■■□□□ 1.2
COMMD1-208ENST00000472729 RIOX1Q9H6W3 641 aa22.53■■□□□ 1.2
COMMD1-208ENST00000472729 PDLIM7Q9NR12 457 aa22.53■■□□□ 1.2
COMMD1-208ENST00000472729 CENPBP07199 599 aaPredicted RBP22.52■■□□□ 1.2
COMMD1-208ENST00000472729 TXNP10599 105 aaKnown RBP22.52■■□□□ 1.2
COMMD1-208ENST00000472729 CXCL17Q6UXB2 119 aa22.52■■□□□ 1.2
COMMD1-208ENST00000472729 ANKRD33Q7Z3H0 272 aa22.52■■□□□ 1.2
COMMD1-208ENST00000472729 SAMD3Q8N6K7 520 aa22.52■■□□□ 1.2
COMMD1-208ENST00000472729 OR6J1Q8NGC5 347 aa22.52■■□□□ 1.2
COMMD1-208ENST00000472729 TBC1D5Q92609 795 aa22.52■■□□□ 1.2
COMMD1-208ENST00000472729 TAAR1Q96RJ0 339 aa22.52■■□□□ 1.2
COMMD1-208ENST00000472729 ZNFX1Q9P2E3 1918 aaKnown RBP22.52■■□□□ 1.2
COMMD1-208ENST00000472729 GCOM1H8Y6P7 765 aaPredicted RBP22.51■■□□□ 1.19
COMMD1-208ENST00000472729 ARVCFO00192 962 aa22.51■■□□□ 1.19
COMMD1-208ENST00000472729 SH2B2O14492 632 aaPredicted RBP22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms