RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 HDAC5Q9UQL6 1122 aa7.1□□□□□ -1.27
SIK3-208ENST00000472648 Q9Y3F1 56 aa7.1□□□□□ -1.27
SIK3-208ENST00000472648 RIPK3Q9Y572 518 aa7.1□□□□□ -1.27
SIK3-208ENST00000472648 NCOR2Q9Y618 2525 aa7.1□□□□□ -1.27
SIK3-208ENST00000472648 PKD1L2Q7Z442 2459 aa7.1□□□□□ -1.27
SIK3-208ENST00000472648 KAT6AQ92794 2004 aa7.1□□□□□ -1.27
SIK3-208ENST00000472648 ABHD14A-ACY1A0A1B0GW23 586 aa7.09□□□□□ -1.27
SIK3-208ENST00000472648 ASB14A6NK59 587 aa7.09□□□□□ -1.27
SIK3-208ENST00000472648 H3BNC9 293 aa7.09□□□□□ -1.27
SIK3-208ENST00000472648 IGSF3O75054 1194 aa7.09□□□□□ -1.27
SIK3-208ENST00000472648 PARNO95453 639 aaKnown RBP7.09□□□□□ -1.27
SIK3-208ENST00000472648 MYL3P08590 195 aa7.09□□□□□ -1.27
SIK3-208ENST00000472648 SMPD1P17405 629 aa7.09□□□□□ -1.27
SIK3-208ENST00000472648 PTGS1P23219 599 aa7.09□□□□□ -1.27
SIK3-208ENST00000472648 CPT1AP50416 773 aa7.09□□□□□ -1.27
SIK3-208ENST00000472648 PURAQ00577 322 aaKnown RBP7.09□□□□□ -1.27
SIK3-208ENST00000472648 DLX2Q07687 328 aaPredicted RBP7.09□□□□□ -1.27
SIK3-208ENST00000472648 COL9A2Q14055 689 aaPredicted RBP7.09□□□□□ -1.27
SIK3-208ENST00000472648 IKBKEQ14164 716 aa7.09□□□□□ -1.27
SIK3-208ENST00000472648 PUM1Q14671 1186 aaKnown RBP eCLIP7.09□□□□□ -1.27
SIK3-208ENST00000472648 ST3GAL2Q16842 350 aa7.09□□□□□ -1.27
SIK3-208ENST00000472648 FAM83BQ5T0W9 1011 aa7.09□□□□□ -1.27
SIK3-208ENST00000472648 NFRKBQ6P4R8 1299 aa7.09□□□□□ -1.27
SIK3-208ENST00000472648 WDR63Q8IWG1 891 aa7.09□□□□□ -1.27
SIK3-208ENST00000472648 CPXCR1Q8N123 301 aa7.09□□□□□ -1.27
SIK3-208ENST00000472648 CAGE1Q8TC20 777 aa7.09□□□□□ -1.27
SIK3-208ENST00000472648 AFAP1L1Q8TED9 768 aa7.09□□□□□ -1.27
SIK3-208ENST00000472648 ASIC4Q96FT7 647 aa7.09□□□□□ -1.27
SIK3-208ENST00000472648 SLF1Q9BQI6 1058 aa7.09□□□□□ -1.27
SIK3-208ENST00000472648 MTG1Q9BT17 334 aaPredicted RBP7.09□□□□□ -1.27
SIK3-208ENST00000472648 LOXHD1Q8IVV2 1947 aa7.09□□□□□ -1.27
SIK3-208ENST00000472648 ATRXP46100 2492 aa7.08□□□□□ -1.28
SIK3-208ENST00000472648 MYH6P13533 1939 aa7.08□□□□□ -1.28
SIK3-208ENST00000472648 LOC730098B7Z3J9 87 aa7.08□□□□□ -1.28
SIK3-208ENST00000472648 TBX10O75333 385 aa7.08□□□□□ -1.28
SIK3-208ENST00000472648 IDH1O75874 414 aaKnown RBP7.08□□□□□ -1.28
SIK3-208ENST00000472648 CYP2E1P05181 493 aaPredicted RBP7.08□□□□□ -1.28
SIK3-208ENST00000472648 NDUFV1P49821 464 aa7.08□□□□□ -1.28
SIK3-208ENST00000472648 PTPN11Q06124 597 aaPredicted RBP7.08□□□□□ -1.28
SIK3-208ENST00000472648 GABPAQ06546 454 aa7.08□□□□□ -1.28
SIK3-208ENST00000472648 CTC1Q2NKJ3 1217 aa7.08□□□□□ -1.28
SIK3-208ENST00000472648 BRDTQ58F21 947 aaPredicted RBP7.08□□□□□ -1.28
SIK3-208ENST00000472648 IQSEC1Q6DN90 963 aa7.08□□□□□ -1.28
SIK3-208ENST00000472648 LRRC8DQ7L1W4 858 aa7.08□□□□□ -1.28
SIK3-208ENST00000472648 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.08□□□□□ -1.28
SIK3-208ENST00000472648 ZBTB33Q86T24 672 aa7.08□□□□□ -1.28
SIK3-208ENST00000472648 FBXO16Q8IX29 292 aaPredicted RBP7.08□□□□□ -1.28
SIK3-208ENST00000472648 COL26A1Q96A83 441 aa7.08□□□□□ -1.28
SIK3-208ENST00000472648 SWAP70Q9UH65 585 aa7.08□□□□□ -1.28
SIK3-208ENST00000472648 RAD50Q92878 1312 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 USP24Q9UPU5 2620 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 USP17L12C9JPN9 530 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 USP17L21D6R901 530 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 ATP2A1O14983 1001 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 ZBED4O75132 1171 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 PDGFBP01127 241 aaPredicted RBP7.07□□□□□ -1.28
SIK3-208ENST00000472648 AMHP03971 560 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 EEF2P13639 858 aaKnown RBP7.07□□□□□ -1.28
SIK3-208ENST00000472648 AKR1B1P15121 316 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 SELPP16109 830 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 CHMP4BP1P59074 171 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 CNTN2Q02246 1040 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 HYAL1Q12794 435 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 PTGISQ16647 500 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 PTPN21Q16825 1174 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 CCDC158Q5M9N0 1113 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 KIAA1211Q6ZU35 1233 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 EEPD1Q7L9B9 569 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 FBXO11Q86XK2 927 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 SIAH1Q8IUQ4 282 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 TMEM192Q8IY95 271 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 KIAA2013Q8IYS2 634 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 MYOCDQ8IZQ8 938 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 FAM133AQ8N9E0 248 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 PRPF38AQ8NAV1 312 aaKnown RBP7.07□□□□□ -1.28
SIK3-208ENST00000472648 CHST13Q8NET6 341 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 PPP1R13LQ8WUF5 828 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 RIPOR3Q96MK2 946 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 YME1L1Q96TA2 773 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 IGFLR1Q9H665 355 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 RAVER2Q9HCJ3 691 aaKnown RBP7.07□□□□□ -1.28
SIK3-208ENST00000472648 PDGFCQ9NRA1 345 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 HOMER2Q9NSB8 354 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 MCM9Q9NXL9 1143 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 COG6Q9Y2V7 657 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 SALL2Q9Y467 1007 aaPredicted RBP7.07□□□□□ -1.28
SIK3-208ENST00000472648 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.07□□□□□ -1.28
SIK3-208ENST00000472648 CEP250Q9BV73 2442 aa7.07□□□□□ -1.28
SIK3-208ENST00000472648 EP300Q09472 2414 aaPredicted RBP7.06□□□□□ -1.28
SIK3-208ENST00000472648 MIA3Q5JRA6 1907 aa7.06□□□□□ -1.28
SIK3-208ENST00000472648 E9PSI1 815 aa7.06□□□□□ -1.28
SIK3-208ENST00000472648 SRGAP3O43295 1099 aa7.06□□□□□ -1.28
SIK3-208ENST00000472648 CSPG5O95196 566 aa7.06□□□□□ -1.28
SIK3-208ENST00000472648 EYA4O95677 639 aa7.06□□□□□ -1.28
SIK3-208ENST00000472648 CXCL10P02778 98 aa7.06□□□□□ -1.28
SIK3-208ENST00000472648 ICAM3P32942 547 aa7.06□□□□□ -1.28
SIK3-208ENST00000472648 CTNNB1P35222 781 aa7.06□□□□□ -1.28
SIK3-208ENST00000472648 HTRA4P83105 476 aaPredicted RBP7.06□□□□□ -1.28
SIK3-208ENST00000472648 EVX2Q03828 476 aa7.06□□□□□ -1.28
SIK3-208ENST00000472648 CBX2Q14781 532 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms