RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 TBC1D32Q96NH3 1257 aa4.56□□□□□ -1.68
XRN1-209ENST00000472625 CRAMP1Q96RY5 1269 aa4.56□□□□□ -1.68
XRN1-209ENST00000472625 OSBPL1AQ9BXW6 950 aa4.56□□□□□ -1.68
XRN1-209ENST00000472625 CHMP4AQ9BY43 222 aa4.56□□□□□ -1.68
XRN1-209ENST00000472625 ZC3H12CQ9C0D7 883 aaKnown RBP4.56□□□□□ -1.68
XRN1-209ENST00000472625 DDX21Q9NR30 783 aaKnown RBP eCLIP4.56□□□□□ -1.68
XRN1-209ENST00000472625 ZNF277Q9NRM2 450 aaPredicted RBP4.56□□□□□ -1.68
XRN1-209ENST00000472625 ADARB2Q9NS39 739 aaKnown RBP4.56□□□□□ -1.68
XRN1-209ENST00000472625 CRIM1Q9NZV1 1036 aa4.56□□□□□ -1.68
XRN1-209ENST00000472625 PPM1HQ9ULR3 514 aa4.56□□□□□ -1.68
XRN1-209ENST00000472625 AK5Q9Y6K8 562 aa4.56□□□□□ -1.68
XRN1-209ENST00000472625 WDR33Q9C0J8 1336 aaKnown RBP4.55□□□□□ -1.68
XRN1-209ENST00000472625 ZNF541Q9H0D2 1346 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 DICER1Q9UPY3 1922 aaKnown RBP4.55□□□□□ -1.68
XRN1-209ENST00000472625 GIPC1O14908 333 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 FOXN1O15353 648 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 PPIP5K2O43314 1243 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 BBOX1O75936 387 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 NFICP08651 508 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 LIG1P18858 919 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 NME2P22392 152 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 PPP2R1AP30153 589 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 GSTT1P30711 240 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 RING1Q06587 406 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 AP3B2Q13367 1082 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 PDE3AQ14432 1141 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 TNIP1Q15025 636 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 PAOXQ6QHF9 649 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 MCM10Q7L590 875 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 DYMQ7RTS9 669 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 SULF2Q8IWU5 870 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 SYNE4Q8N205 404 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 GAL3ST3Q96A11 431 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 PHACTR3Q96KR7 559 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 SEMA6CQ9H3T2 930 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 DISC1Q9NRI5 854 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 C1GALT1Q9NS00 363 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 FAM8A1Q9UBU6 413 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 PRKAG2Q9UGJ0 569 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 PARP2Q9UGN5 583 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 AKAP2Q9Y2D5 859 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 LEMD3Q9Y2U8 911 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 USP16Q9Y5T5 823 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 ANKRD31Q8N7Z5 1873 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 SNED1Q8TER0 1413 aa4.55□□□□□ -1.68
XRN1-209ENST00000472625 ABCC12Q96J65 1359 aa4.54□□□□□ -1.68
XRN1-209ENST00000472625 THSD7BQ9C0I4 1608 aa4.54□□□□□ -1.68
XRN1-209ENST00000472625 HOXB7P09629 217 aa4.54□□□□□ -1.68
XRN1-209ENST00000472625 TAL1P17542 331 aaPredicted RBP4.54□□□□□ -1.68
XRN1-209ENST00000472625 RPS12P25398 132 aaKnown RBP4.54□□□□□ -1.68
XRN1-209ENST00000472625 ARNTP27540 789 aa4.54□□□□□ -1.68
XRN1-209ENST00000472625 NOGQ13253 232 aa4.54□□□□□ -1.68
XRN1-209ENST00000472625 NFE2L2Q16236 605 aa4.54□□□□□ -1.68
XRN1-209ENST00000472625 ZC3H12AQ5D1E8 599 aaKnown RBP4.54□□□□□ -1.68
XRN1-209ENST00000472625 MEI1Q5TIA1 1274 aa4.54□□□□□ -1.68
XRN1-209ENST00000472625 MAP1SQ66K74 1059 aaPredicted RBP4.54□□□□□ -1.68
XRN1-209ENST00000472625 DPP8Q6V1X1 898 aaPredicted RBP4.54□□□□□ -1.68
XRN1-209ENST00000472625 NFXL1Q6ZNB6 911 aa4.54□□□□□ -1.68
XRN1-209ENST00000472625 DDX46Q7L014 1031 aaKnown RBP4.54□□□□□ -1.68
XRN1-209ENST00000472625 CAPNS2Q96L46 248 aa4.54□□□□□ -1.68
XRN1-209ENST00000472625 FANCD2OSQ96PS1 177 aa4.54□□□□□ -1.68
XRN1-209ENST00000472625 CORO1BQ9BR76 489 aa4.54□□□□□ -1.68
XRN1-209ENST00000472625 UTP14AQ9BVJ6 771 aaKnown RBP4.54□□□□□ -1.68
XRN1-209ENST00000472625 BCL2L13Q9BXK5 485 aa4.54□□□□□ -1.68
XRN1-209ENST00000472625 LRRC4CQ9HCJ2 640 aa4.54□□□□□ -1.68
XRN1-209ENST00000472625 RAD18Q9NS91 495 aa4.54□□□□□ -1.68
XRN1-209ENST00000472625 KRT82Q9NSB4 513 aa4.54□□□□□ -1.68
XRN1-209ENST00000472625 TSPYL4Q9UJ04 414 aa4.54□□□□□ -1.68
XRN1-209ENST00000472625 ZNRF3Q9ULT6 936 aa4.54□□□□□ -1.68
XRN1-209ENST00000472625 ATP6V0A2Q9Y487 856 aa4.54□□□□□ -1.68
XRN1-209ENST00000472625 ADAMTSL1Q8N6G6 1762 aa4.54□□□□□ -1.68
XRN1-209ENST00000472625 SH3TC1Q8TE82 1336 aa4.53□□□□□ -1.68
XRN1-209ENST00000472625 H7C1D1 291 aa4.53□□□□□ -1.68
XRN1-209ENST00000472625 NTSR2O95665 410 aa4.53□□□□□ -1.68
XRN1-209ENST00000472625 WNT11O96014 354 aa4.53□□□□□ -1.68
XRN1-209ENST00000472625 HSPA8P11142 646 aaKnown RBP4.53□□□□□ -1.68
XRN1-209ENST00000472625 LBX1P52954 281 aa4.53□□□□□ -1.68
XRN1-209ENST00000472625 EIF4A1P60842 406 aaKnown RBP4.53□□□□□ -1.68
XRN1-209ENST00000472625 KIAA2012Q0VF49 1180 aa4.53□□□□□ -1.68
XRN1-209ENST00000472625 MSMPQ1L6U9 139 aa4.53□□□□□ -1.68
XRN1-209ENST00000472625 CCDC27Q2M243 656 aa4.53□□□□□ -1.68
XRN1-209ENST00000472625 CIAPIN1Q6FI81 312 aa4.53□□□□□ -1.68
XRN1-209ENST00000472625 CDC37L1Q7L3B6 337 aa4.53□□□□□ -1.68
XRN1-209ENST00000472625 UBE3DQ7Z6J8 389 aa4.53□□□□□ -1.68
XRN1-209ENST00000472625 ZAR1Q86SH2 424 aa4.53□□□□□ -1.68
XRN1-209ENST00000472625 ABI1Q8IZP0 508 aa4.53□□□□□ -1.68
XRN1-209ENST00000472625 GPBAR1Q8TDU6 330 aa4.53□□□□□ -1.68
XRN1-209ENST00000472625 ABHD8Q96I13 439 aa4.53□□□□□ -1.68
XRN1-209ENST00000472625 GPR101Q96P66 508 aaPredicted RBP4.53□□□□□ -1.68
XRN1-209ENST00000472625 EYA3Q99504 573 aa4.53□□□□□ -1.68
XRN1-209ENST00000472625 RTFDC1Q9BY42 306 aaPredicted RBP4.53□□□□□ -1.68
XRN1-209ENST00000472625 SAGE1Q9NXZ1 904 aa4.53□□□□□ -1.68
XRN1-209ENST00000472625 GPRC5DQ9NZD1 345 aa4.53□□□□□ -1.68
XRN1-209ENST00000472625 GPN3Q9UHW5 284 aaPredicted RBP4.53□□□□□ -1.68
XRN1-209ENST00000472625 DAGLAQ9Y4D2 1042 aa4.53□□□□□ -1.68
XRN1-209ENST00000472625 U3KQE9 123 aa4.53□□□□□ -1.68
XRN1-209ENST00000472625 VIRMAQ69YN4 1812 aaKnown RBP4.53□□□□□ -1.68
XRN1-209ENST00000472625 SLX4Q8IY92 1834 aa4.53□□□□□ -1.68
XRN1-209ENST00000472625 ABCC4O15439 1325 aa4.52□□□□□ -1.69
XRN1-209ENST00000472625 UBN2Q6ZU65 1347 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms