RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 CCDC69A6NI79 296 aa19.81■□□□□ 0.76
COMMD3-210ENST00000472610 C6orf222P0C671 652 aaPredicted RBP19.81■□□□□ 0.76
COMMD3-210ENST00000472610 KIF5BP33176 963 aa19.81■□□□□ 0.76
COMMD3-210ENST00000472610 RTP1P59025 263 aa19.81■□□□□ 0.76
COMMD3-210ENST00000472610 NKX3-2P78367 333 aa19.81■□□□□ 0.76
COMMD3-210ENST00000472610 SNX17Q15036 470 aa19.81■□□□□ 0.76
COMMD3-210ENST00000472610 TSGA10IPQ3SY00 556 aa19.81■□□□□ 0.76
COMMD3-210ENST00000472610 TAPT1Q6NXT6 567 aa19.81■□□□□ 0.76
COMMD3-210ENST00000472610 NFXL1Q6ZNB6 911 aa19.81■□□□□ 0.76
COMMD3-210ENST00000472610 NOL8Q76FK4 1167 aaKnown RBP19.81■□□□□ 0.76
COMMD3-210ENST00000472610 ZNF654Q8IZM8 581 aa19.81■□□□□ 0.76
COMMD3-210ENST00000472610 SAMD3Q8N6K7 520 aa19.81■□□□□ 0.76
COMMD3-210ENST00000472610 CTCFLQ8NI51 663 aaPredicted RBP19.81■□□□□ 0.76
COMMD3-210ENST00000472610 MAP3K20Q9NYL2 800 aaKnown RBP19.81■□□□□ 0.76
COMMD3-210ENST00000472610 Q9Y3F1 56 aa19.81■□□□□ 0.76
COMMD3-210ENST00000472610 LRRC37A2A6NM11 1700 aa19.81■□□□□ 0.76
COMMD3-210ENST00000472610 SH2B2O14492 632 aaPredicted RBP19.8■□□□□ 0.76
COMMD3-210ENST00000472610 ADCY6O43306 1168 aa19.8■□□□□ 0.76
COMMD3-210ENST00000472610 CALM1P0DP23 149 aa19.8■□□□□ 0.76
COMMD3-210ENST00000472610 CALM2P0DP24 149 aa19.8■□□□□ 0.76
COMMD3-210ENST00000472610 CALM3P0DP25 149 aa19.8■□□□□ 0.76
COMMD3-210ENST00000472610 ACLYP53396 1101 aa19.8■□□□□ 0.76
COMMD3-210ENST00000472610 PDE4DQ08499 809 aa19.8■□□□□ 0.76
COMMD3-210ENST00000472610 KRT32Q14532 448 aa19.8■□□□□ 0.76
COMMD3-210ENST00000472610 KCNA10Q16322 511 aa19.8■□□□□ 0.76
COMMD3-210ENST00000472610 EEPD1Q7L9B9 569 aa19.8■□□□□ 0.76
COMMD3-210ENST00000472610 NEK1Q96PY6 1258 aa19.8■□□□□ 0.76
COMMD3-210ENST00000472610 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.79■□□□□ 0.76
COMMD3-210ENST00000472610 A0A1W2PQ45 241 aaPredicted RBP19.79■□□□□ 0.76
COMMD3-210ENST00000472610 A0A1W2PQY0 241 aa19.79■□□□□ 0.76
COMMD3-210ENST00000472610 SYN1P17600 705 aa19.79■□□□□ 0.76
COMMD3-210ENST00000472610 SMARCA1P28370 1054 aa19.79■□□□□ 0.76
COMMD3-210ENST00000472610 GNAQP50148 359 aa19.79■□□□□ 0.76
COMMD3-210ENST00000472610 GNASQ5JWF2 1037 aa19.79■□□□□ 0.76
COMMD3-210ENST00000472610 CCSAPQ6IQ19 270 aaPredicted RBP19.79■□□□□ 0.76
COMMD3-210ENST00000472610 FBXO16Q8IX29 292 aaPredicted RBP19.79■□□□□ 0.76
COMMD3-210ENST00000472610 GDF15Q99988 308 aa19.79■□□□□ 0.76
COMMD3-210ENST00000472610 LZTS2Q9BRK4 669 aa19.79■□□□□ 0.76
COMMD3-210ENST00000472610 AP5M1Q9H0R1 490 aa19.79■□□□□ 0.76
COMMD3-210ENST00000472610 PRO3102Q9H379 93 aa19.79■□□□□ 0.76
COMMD3-210ENST00000472610 PDGFCQ9NRA1 345 aa19.79■□□□□ 0.76
COMMD3-210ENST00000472610 RBM27Q9P2N5 1060 aaKnown RBP19.79■□□□□ 0.76
COMMD3-210ENST00000472610 PRKAG2Q9UGJ0 569 aa19.79■□□□□ 0.76
COMMD3-210ENST00000472610 GNEQ9Y223 722 aaKnown RBP19.79■□□□□ 0.76
COMMD3-210ENST00000472610 ATP11BQ9Y2G3 1177 aa19.79■□□□□ 0.76
COMMD3-210ENST00000472610 PCDHA1Q9Y5I3 950 aa19.79■□□□□ 0.76
COMMD3-210ENST00000472610 PNMA6FA0A0J9YX94 578 aa19.78■□□□□ 0.76
COMMD3-210ENST00000472610 A0A1W2PPC1 479 aa19.78■□□□□ 0.76
COMMD3-210ENST00000472610 SMPD1P17405 629 aa19.78■□□□□ 0.76
COMMD3-210ENST00000472610 EDNRBP24530 442 aa19.78■□□□□ 0.76
COMMD3-210ENST00000472610 BMP8BP34820 402 aa19.78■□□□□ 0.76
COMMD3-210ENST00000472610 HOMER1Q86YM7 354 aa19.78■□□□□ 0.76
COMMD3-210ENST00000472610 SYTL5Q8TDW5 730 aaPredicted RBP19.78■□□□□ 0.76
COMMD3-210ENST00000472610 NSUN6Q8TEA1 469 aaKnown RBP19.78■□□□□ 0.76
COMMD3-210ENST00000472610 TBC1D5Q92609 795 aa19.78■□□□□ 0.76
COMMD3-210ENST00000472610 GLT1D1Q96MS3 346 aa19.78■□□□□ 0.76
COMMD3-210ENST00000472610 PIGSQ96S52 555 aa19.78■□□□□ 0.76
COMMD3-210ENST00000472610 GPHNQ9NQX3 736 aaPredicted RBP19.78■□□□□ 0.76
COMMD3-210ENST00000472610 STARD7Q9NQZ5 370 aa19.78■□□□□ 0.76
COMMD3-210ENST00000472610 DDX49Q9Y6V7 483 aaKnown RBP19.78■□□□□ 0.76
COMMD3-210ENST00000472610 ELP1O95163 1332 aa19.77■□□□□ 0.76
COMMD3-210ENST00000472610 RBM47A0AV96 593 aaKnown RBP19.77■□□□□ 0.76
COMMD3-210ENST00000472610 CYTH3O43739 400 aa19.77■□□□□ 0.76
COMMD3-210ENST00000472610 REC8O95072 547 aa19.77■□□□□ 0.76
COMMD3-210ENST00000472610 CFBP00751 764 aa19.77■□□□□ 0.76
COMMD3-210ENST00000472610 ASGR1P07306 291 aa19.77■□□□□ 0.76
COMMD3-210ENST00000472610 HMGB1P09429 215 aaKnown RBP19.77■□□□□ 0.76
COMMD3-210ENST00000472610 GHRHRQ02643 423 aa19.77■□□□□ 0.76
COMMD3-210ENST00000472610 TRIM60Q495X7 471 aa19.77■□□□□ 0.76
COMMD3-210ENST00000472610 DUSP28Q4G0W2 176 aa19.77■□□□□ 0.76
COMMD3-210ENST00000472610 DHX32Q7L7V1 743 aaKnown RBP19.77■□□□□ 0.76
COMMD3-210ENST00000472610 TLK2Q86UE8 772 aa19.77■□□□□ 0.76
COMMD3-210ENST00000472610 IWS1Q96ST2 819 aa19.77■□□□□ 0.76
COMMD3-210ENST00000472610 SPZ1Q9BXG8 430 aa19.77■□□□□ 0.76
COMMD3-210ENST00000472610 SLC12A7Q9Y666 1083 aa19.77■□□□□ 0.76
COMMD3-210ENST00000472610 MYADML2A6NDP7 307 aa19.76■□□□□ 0.75
COMMD3-210ENST00000472610 DYNC1LI2O43237 492 aaPredicted RBP19.76■□□□□ 0.75
COMMD3-210ENST00000472610 ZEB2O60315 1214 aa19.76■□□□□ 0.75
COMMD3-210ENST00000472610 PPP1R11O60927 126 aaPredicted RBP19.76■□□□□ 0.75
COMMD3-210ENST00000472610 HSD17B4P51659 736 aa19.76■□□□□ 0.75
COMMD3-210ENST00000472610 SLC35G1Q2M3R5 365 aa19.76■□□□□ 0.75
COMMD3-210ENST00000472610 SYNE3Q6ZMZ3 975 aa19.76■□□□□ 0.75
COMMD3-210ENST00000472610 SGMS1Q86VZ5 419 aa19.76■□□□□ 0.75
COMMD3-210ENST00000472610 SCFD2Q8WU76 684 aa19.76■□□□□ 0.75
COMMD3-210ENST00000472610 TAAR1Q96RJ0 339 aa19.76■□□□□ 0.75
COMMD3-210ENST00000472610 RMDN3Q96TC7 470 aa19.76■□□□□ 0.75
COMMD3-210ENST00000472610 MYL10Q9BUA6 226 aa19.76■□□□□ 0.75
COMMD3-210ENST00000472610 WDR11Q9BZH6 1224 aa19.76■□□□□ 0.75
COMMD3-210ENST00000472610 BAZ2BQ9UIF8 2168 aaKnown RBP19.76■□□□□ 0.75
COMMD3-210ENST00000472610 NKRFO15226 690 aaKnown RBP eCLIP19.75■□□□□ 0.75
COMMD3-210ENST00000472610 CTAGE5O15320 804 aa19.75■□□□□ 0.75
COMMD3-210ENST00000472610 EXOSC10Q01780 885 aaKnown RBP19.75■□□□□ 0.75
COMMD3-210ENST00000472610 RASEFQ8IZ41 740 aa19.75■□□□□ 0.75
COMMD3-210ENST00000472610 VTI1AQ96AJ9 217 aa19.75■□□□□ 0.75
COMMD3-210ENST00000472610 RRP36Q96EU6 259 aaKnown RBP19.75■□□□□ 0.75
COMMD3-210ENST00000472610 LBHD1Q9BQE6 289 aaPredicted RBP19.75■□□□□ 0.75
COMMD3-210ENST00000472610 OPLAHO14841 1288 aa19.74■□□□□ 0.75
COMMD3-210ENST00000472610 EPB41L2O43491 1005 aaKnown RBP19.74■□□□□ 0.75
COMMD3-210ENST00000472610 CABYRO75952 493 aa19.74■□□□□ 0.75
COMMD3-210ENST00000472610 MAGEA10P43363 369 aaPredicted RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms