RNA–Protein interactions for RNA: ENST00000472588.5

PAXBP1-208, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-208ENST00000472588 GHRHRQ02643 423 aa25.5■■□□□ 1.67
PAXBP1-208ENST00000472588 NONOQ15233 471 aaKnown RBP eCLIP25.5■■□□□ 1.67
PAXBP1-208ENST00000472588 PIK3AP1Q6ZUJ8 805 aa25.5■■□□□ 1.67
PAXBP1-208ENST00000472588 HOMER2Q9NSB8 354 aa25.5■■□□□ 1.67
PAXBP1-208ENST00000472588 WBP1LQ9NX94 342 aa25.5■■□□□ 1.67
PAXBP1-208ENST00000472588 SPDYE3A6NKU9 549 aa25.49■■□□□ 1.67
PAXBP1-208ENST00000472588 IGF2BP3O00425 579 aaKnown RBP eCLIP25.49■■□□□ 1.67
PAXBP1-208ENST00000472588 OPLAHO14841 1288 aa25.49■■□□□ 1.67
PAXBP1-208ENST00000472588 ALDH1A1P00352 501 aa25.49■■□□□ 1.67
PAXBP1-208ENST00000472588 JAKMIP3Q5VZ66 844 aa25.49■■□□□ 1.67
PAXBP1-208ENST00000472588 GPRC5AQ8NFJ5 357 aa25.49■■□□□ 1.67
PAXBP1-208ENST00000472588 CLEC4DQ8WXI8 215 aa25.49■■□□□ 1.67
PAXBP1-208ENST00000472588 EHMT1Q9H9B1 1298 aa25.49■■□□□ 1.67
PAXBP1-208ENST00000472588 BAG4O95429 457 aaKnown RBP25.48■■□□□ 1.67
PAXBP1-208ENST00000472588 TAF1CQ15572 869 aaPredicted RBP25.48■■□□□ 1.67
PAXBP1-208ENST00000472588 FOXD4L6Q3SYB3 417 aaPredicted RBP25.48■■□□□ 1.67
PAXBP1-208ENST00000472588 USP17L6PQ6QN14 398 aa25.48■■□□□ 1.67
PAXBP1-208ENST00000472588 FOXD4L3Q6VB84 417 aaPredicted RBP25.48■■□□□ 1.67
PAXBP1-208ENST00000472588 RASGRP4Q8TDF6 673 aa25.48■■□□□ 1.67
PAXBP1-208ENST00000472588 RIPK3Q9Y572 518 aa25.48■■□□□ 1.67
PAXBP1-208ENST00000472588 CNMDO75829 334 aa25.47■■□□□ 1.67
PAXBP1-208ENST00000472588 TAL1P17542 331 aaPredicted RBP25.47■■□□□ 1.67
PAXBP1-208ENST00000472588 HSD17B4P51659 736 aa25.47■■□□□ 1.67
PAXBP1-208ENST00000472588 ERVK-9P63128 1117 aa25.47■■□□□ 1.67
PAXBP1-208ENST00000472588 ERVK-24P63145 666 aa25.47■■□□□ 1.67
PAXBP1-208ENST00000472588 DNM1Q05193 864 aaKnown RBP25.47■■□□□ 1.67
PAXBP1-208ENST00000472588 UBE2SQ16763 222 aa25.47■■□□□ 1.67
PAXBP1-208ENST00000472588 CSPP1Q1MSJ5 1256 aa25.47■■□□□ 1.67
PAXBP1-208ENST00000472588 FAM173BQ6P4H8 233 aa25.47■■□□□ 1.67
PAXBP1-208ENST00000472588 POTEEQ6S8J3 1075 aa25.47■■□□□ 1.67
PAXBP1-208ENST00000472588 SHCBP1Q8NEM2 672 aa25.47■■□□□ 1.67
PAXBP1-208ENST00000472588 MROH8Q9H579 483 aa25.47■■□□□ 1.67
PAXBP1-208ENST00000472588 MORF4L1Q9UBU8 362 aa25.47■■□□□ 1.67
PAXBP1-208ENST00000472588 GOLGA6L22H0YM25 854 aa25.46■■□□□ 1.67
PAXBP1-208ENST00000472588 NFIBO00712 420 aa25.46■■□□□ 1.67
PAXBP1-208ENST00000472588 NCLP19338 710 aaKnown RBP25.46■■□□□ 1.67
PAXBP1-208ENST00000472588 MUM1L1Q5H9M0 696 aa25.46■■□□□ 1.67
PAXBP1-208ENST00000472588 RNF207Q6ZRF8 634 aa25.46■■□□□ 1.67
PAXBP1-208ENST00000472588 MOV10L1Q9BXT6 1211 aaKnown RBP25.46■■□□□ 1.67
PAXBP1-208ENST00000472588 SCAND2PQ9GZW5 306 aaPredicted RBP25.46■■□□□ 1.67
PAXBP1-208ENST00000472588 ZFYVE28Q9HCC9 887 aa25.46■■□□□ 1.67
PAXBP1-208ENST00000472588 NCAPG2Q86XI2 1143 aa25.46■■□□□ 1.67
PAXBP1-208ENST00000472588 NAP1L4Q99733 375 aaKnown RBP25.46■■□□□ 1.67
PAXBP1-208ENST00000472588 BEGAINQ9BUH8 593 aa25.46■■□□□ 1.67
PAXBP1-208ENST00000472588 TXNRD2Q9NNW7 524 aa25.46■■□□□ 1.67
PAXBP1-208ENST00000472588 TMEM260Q9NX78 707 aa25.46■■□□□ 1.67
PAXBP1-208ENST00000472588 TCHHQ07283 1943 aa25.45■■□□□ 1.66
PAXBP1-208ENST00000472588 ADAMTS3O15072 1205 aa25.45■■□□□ 1.66
PAXBP1-208ENST00000472588 HOXA13P31271 388 aaPredicted RBP25.45■■□□□ 1.66
PAXBP1-208ENST00000472588 FAM110CQ1W6H9 321 aa25.45■■□□□ 1.66
PAXBP1-208ENST00000472588 EARS2Q5JPH6 523 aaKnown RBP25.45■■□□□ 1.66
PAXBP1-208ENST00000472588 ANKRD13CQ8N6S4 541 aa25.45■■□□□ 1.66
PAXBP1-208ENST00000472588 POLR3EQ9NVU0 708 aa25.45■■□□□ 1.66
PAXBP1-208ENST00000472588 CEP131Q9UPN4 1083 aa25.45■■□□□ 1.66
PAXBP1-208ENST00000472588 PFASO15067 1338 aa25.44■■□□□ 1.66
PAXBP1-208ENST00000472588 ERCC3P19447 782 aa25.44■■□□□ 1.66
PAXBP1-208ENST00000472588 NSMFQ6X4W1 530 aa25.44■■□□□ 1.66
PAXBP1-208ENST00000472588 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.44■■□□□ 1.66
PAXBP1-208ENST00000472588 NEK8Q86SG6 692 aa25.44■■□□□ 1.66
PAXBP1-208ENST00000472588 CCAR1Q8IX12 1150 aaKnown RBP25.44■■□□□ 1.66
PAXBP1-208ENST00000472588 TBCKQ8TEA7 893 aa25.44■■□□□ 1.66
PAXBP1-208ENST00000472588 ANO3Q9BYT9 981 aa25.44■■□□□ 1.66
PAXBP1-208ENST00000472588 BMP15O95972 392 aa25.43■■□□□ 1.66
PAXBP1-208ENST00000472588 RPS6P62753 249 aaKnown RBP25.43■■□□□ 1.66
PAXBP1-208ENST00000472588 INF2Q27J81 1249 aa25.43■■□□□ 1.66
PAXBP1-208ENST00000472588 Q3C1V9 767 aa25.43■■□□□ 1.66
PAXBP1-208ENST00000472588 ANO1Q5XXA6 986 aa25.43■■□□□ 1.66
PAXBP1-208ENST00000472588 FCHSD1Q86WN1 690 aa25.43■■□□□ 1.66
PAXBP1-208ENST00000472588 ANKRD35Q8N283 1001 aa25.43■■□□□ 1.66
PAXBP1-208ENST00000472588 TBC1D5Q92609 795 aa25.43■■□□□ 1.66
PAXBP1-208ENST00000472588 RTEL1Q9NZ71 1219 aa25.43■■□□□ 1.66
PAXBP1-208ENST00000472588 TFIP11Q9UBB9 837 aaKnown RBP25.43■■□□□ 1.66
PAXBP1-208ENST00000472588 FOXN1O15353 648 aa25.42■■□□□ 1.66
PAXBP1-208ENST00000472588 TLR2O60603 784 aa25.42■■□□□ 1.66
PAXBP1-208ENST00000472588 TOB1P50616 345 aaPredicted RBP25.42■■□□□ 1.66
PAXBP1-208ENST00000472588 USP11P51784 963 aa25.42■■□□□ 1.66
PAXBP1-208ENST00000472588 ORC2Q13416 577 aaPredicted RBP25.42■■□□□ 1.66
PAXBP1-208ENST00000472588 TTC38Q5R3I4 469 aa25.42■■□□□ 1.66
PAXBP1-208ENST00000472588 USP28Q96RU2 1077 aa25.42■■□□□ 1.66
PAXBP1-208ENST00000472588 FAM205CA6NFA0 338 aa25.41■■□□□ 1.66
PAXBP1-208ENST00000472588 CA12O43570 354 aa25.41■■□□□ 1.66
PAXBP1-208ENST00000472588 YEATS4O95619 227 aa25.41■■□□□ 1.66
PAXBP1-208ENST00000472588 NOM1Q5C9Z4 860 aaKnown RBP25.41■■□□□ 1.66
PAXBP1-208ENST00000472588 SPATA32Q96LK8 384 aa25.41■■□□□ 1.66
PAXBP1-208ENST00000472588 A1CFQ9NQ94 594 aaKnown RBP25.41■■□□□ 1.66
PAXBP1-208ENST00000472588 CYP39A1Q9NYL5 469 aa25.41■■□□□ 1.66
PAXBP1-208ENST00000472588 CNPY2Q9Y2B0 182 aa25.41■■□□□ 1.66
PAXBP1-208ENST00000472588 PEX10O60683 326 aa25.4■■□□□ 1.66
PAXBP1-208ENST00000472588 ATP2B1P20020 1258 aa25.4■■□□□ 1.66
PAXBP1-208ENST00000472588 SREBF1P36956 1147 aa25.4■■□□□ 1.66
PAXBP1-208ENST00000472588 NASPP49321 788 aaPredicted RBP25.4■■□□□ 1.66
PAXBP1-208ENST00000472588 BAATQ14032 418 aaPredicted RBP25.4■■□□□ 1.66
PAXBP1-208ENST00000472588 SYTL5Q8TDW5 730 aaPredicted RBP25.4■■□□□ 1.66
PAXBP1-208ENST00000472588 PGBD1Q96JS3 809 aa25.4■■□□□ 1.66
PAXBP1-208ENST00000472588 ADGRA2Q96PE1 1338 aa25.4■■□□□ 1.66
PAXBP1-208ENST00000472588 CEBPZQ03701 1054 aaKnown RBP25.39■■□□□ 1.66
PAXBP1-208ENST00000472588 KCTD2Q14681 263 aa25.39■■□□□ 1.66
PAXBP1-208ENST00000472588 STK38Q15208 465 aa25.39■■□□□ 1.66
PAXBP1-208ENST00000472588 SF3A1Q15459 793 aaKnown RBP25.39■■□□□ 1.66
PAXBP1-208ENST00000472588 LETM2Q2VYF4 491 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms