RNA–Protein interactions for RNA: ENST00000472518.1

RTKN-207, Transcript of rhotekin, humanhuman

TSL 1 (best)

Gene RTKN, Length 1,105 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-207ENST00000472518 ALDH5A1P51649 535 aaPredicted RBP16.4■□□□□ 0.22
RTKN-207ENST00000472518 ASPRV1Q53RT3 343 aa16.4■□□□□ 0.22
RTKN-207ENST00000472518 BRDTQ58F21 947 aaPredicted RBP16.4■□□□□ 0.22
RTKN-207ENST00000472518 TTBK2Q6IQ55 1244 aa16.4■□□□□ 0.22
RTKN-207ENST00000472518 RNF207Q6ZRF8 634 aa16.4■□□□□ 0.22
RTKN-207ENST00000472518 FAM126BQ8IXS8 530 aa16.4■□□□□ 0.22
RTKN-207ENST00000472518 TMEM199Q8N511 208 aa16.4■□□□□ 0.22
RTKN-207ENST00000472518 EXOC6Q8TAG9 804 aa16.4■□□□□ 0.22
RTKN-207ENST00000472518 RNPC3Q96LT9 517 aaKnown RBP16.4■□□□□ 0.22
RTKN-207ENST00000472518 KAT14Q9H8E8 782 aa16.4■□□□□ 0.22
RTKN-207ENST00000472518 GPCPD1Q9NPB8 672 aa16.4■□□□□ 0.22
RTKN-207ENST00000472518 MYH6P13533 1939 aa16.4■□□□□ 0.22
RTKN-207ENST00000472518 NEDD4P46934 1319 aa16.4■□□□□ 0.22
RTKN-207ENST00000472518 FRMPD2Q68DX3 1309 aaPredicted RBP16.4■□□□□ 0.22
RTKN-207ENST00000472518 PTPDC1A2A3K4 754 aa16.39■□□□□ 0.21
RTKN-207ENST00000472518 CTAGE5O15320 804 aa16.39■□□□□ 0.21
RTKN-207ENST00000472518 BAATQ14032 418 aaPredicted RBP16.39■□□□□ 0.21
RTKN-207ENST00000472518 DUSP28Q4G0W2 176 aa16.39■□□□□ 0.21
RTKN-207ENST00000472518 TAPT1Q6NXT6 567 aa16.39■□□□□ 0.21
RTKN-207ENST00000472518 PSRC1Q6PGN9 363 aaPredicted RBP16.39■□□□□ 0.21
RTKN-207ENST00000472518 RASGRP2Q7LDG7 609 aa16.39■□□□□ 0.21
RTKN-207ENST00000472518 FBXO16Q8IX29 292 aaPredicted RBP16.39■□□□□ 0.21
RTKN-207ENST00000472518 SLC43A3Q8NBI5 491 aa16.39■□□□□ 0.21
RTKN-207ENST00000472518 PNMA1Q8ND90 353 aa16.39■□□□□ 0.21
RTKN-207ENST00000472518 MAFAQ8NHW3 353 aaPredicted RBP16.39■□□□□ 0.21
RTKN-207ENST00000472518 MYLIPQ8WY64 445 aa16.39■□□□□ 0.21
RTKN-207ENST00000472518 SEMA6BQ9H3T3 888 aa16.39■□□□□ 0.21
RTKN-207ENST00000472518 POLR3EQ9NVU0 708 aa16.39■□□□□ 0.21
RTKN-207ENST00000472518 ASTN1O14525 1302 aa16.39■□□□□ 0.21
RTKN-207ENST00000472518 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.38■□□□□ 0.21
RTKN-207ENST00000472518 RBM47A0AV96 593 aaKnown RBP16.38■□□□□ 0.21
RTKN-207ENST00000472518 NFIBO00712 420 aa16.38■□□□□ 0.21
RTKN-207ENST00000472518 KDM4AO75164 1064 aa16.38■□□□□ 0.21
RTKN-207ENST00000472518 SMPD1P17405 629 aa16.38■□□□□ 0.21
RTKN-207ENST00000472518 ITGB8P26012 769 aa16.38■□□□□ 0.21
RTKN-207ENST00000472518 CPT1AP50416 773 aa16.38■□□□□ 0.21
RTKN-207ENST00000472518 SNAP25P60880 206 aa16.38■□□□□ 0.21
RTKN-207ENST00000472518 KIAA1211Q6ZU35 1233 aa16.38■□□□□ 0.21
RTKN-207ENST00000472518 CHMP4CQ96CF2 233 aa16.38■□□□□ 0.21
RTKN-207ENST00000472518 ZSCAN10Q96SZ4 725 aaPredicted RBP16.38■□□□□ 0.21
RTKN-207ENST00000472518 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.37■□□□□ 0.21
RTKN-207ENST00000472518 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.37■□□□□ 0.21
RTKN-207ENST00000472518 DYNC1LI2O43237 492 aaPredicted RBP16.37■□□□□ 0.21
RTKN-207ENST00000472518 CD4P01730 458 aa16.37■□□□□ 0.21
RTKN-207ENST00000472518 EDNRBP24530 442 aa16.37■□□□□ 0.21
RTKN-207ENST00000472518 MCF2L2Q86YR7 1114 aa16.37■□□□□ 0.21
RTKN-207ENST00000472518 SCFD2Q8WU76 684 aa16.37■□□□□ 0.21
RTKN-207ENST00000472518 RUFY2Q8WXA3 655 aa16.37■□□□□ 0.21
RTKN-207ENST00000472518 CLEC4DQ8WXI8 215 aa16.37■□□□□ 0.21
RTKN-207ENST00000472518 UBAC1Q9BSL1 405 aa16.37■□□□□ 0.21
RTKN-207ENST00000472518 MTIF3Q9H2K0 278 aaKnown RBP16.37■□□□□ 0.21
RTKN-207ENST00000472518 ABCB11O95342 1321 aa16.37■□□□□ 0.21
RTKN-207ENST00000472518 KPNA6O60684 536 aa16.36■□□□□ 0.21
RTKN-207ENST00000472518 SUPT20HL2P0C7V6 817 aa16.36■□□□□ 0.21
RTKN-207ENST00000472518 RPS6P62753 249 aaKnown RBP16.36■□□□□ 0.21
RTKN-207ENST00000472518 BEX3Q00994 111 aa16.36■□□□□ 0.21
RTKN-207ENST00000472518 PDE4DQ08499 809 aa16.36■□□□□ 0.21
RTKN-207ENST00000472518 TRAF1Q13077 416 aa16.36■□□□□ 0.21
RTKN-207ENST00000472518 ITGA7Q13683 1181 aa16.36■□□□□ 0.21
RTKN-207ENST00000472518 PPP2R5BQ15173 497 aa16.36■□□□□ 0.21
RTKN-207ENST00000472518 CXCL17Q6UXB2 119 aa16.36■□□□□ 0.21
RTKN-207ENST00000472518 EEPD1Q7L9B9 569 aa16.36■□□□□ 0.21
RTKN-207ENST00000472518 WDR11Q9BZH6 1224 aa16.36■□□□□ 0.21
RTKN-207ENST00000472518 PRDM6Q9NQX0 595 aa16.36■□□□□ 0.21
RTKN-207ENST00000472518 SCN10AQ9Y5Y9 1956 aa16.35■□□□□ 0.21
RTKN-207ENST00000472518 PARP1P09874 1014 aaKnown RBP16.35■□□□□ 0.21
RTKN-207ENST00000472518 CALML3P27482 149 aa16.35■□□□□ 0.21
RTKN-207ENST00000472518 EPHB4P54760 987 aa16.35■□□□□ 0.21
RTKN-207ENST00000472518 TRDNQ13061 729 aa16.35■□□□□ 0.21
RTKN-207ENST00000472518 CDC37Q16543 378 aaPredicted RBP16.35■□□□□ 0.21
RTKN-207ENST00000472518 SLC30A10Q6XR72 485 aa16.35■□□□□ 0.21
RTKN-207ENST00000472518 SAMD3Q8N6K7 520 aa16.35■□□□□ 0.21
RTKN-207ENST00000472518 USP38Q8NB14 1042 aa16.35■□□□□ 0.21
RTKN-207ENST00000472518 PDGFCQ9NRA1 345 aa16.35■□□□□ 0.21
RTKN-207ENST00000472518 TNKSO95271 1327 aa16.35■□□□□ 0.21
RTKN-207ENST00000472518 MYO9BQ13459 2157 aa16.34■□□□□ 0.21
RTKN-207ENST00000472518 B4E1Z4 1266 aa16.34■□□□□ 0.21
RTKN-207ENST00000472518 TTC22Q5TAA0 569 aa16.34■□□□□ 0.21
RTKN-207ENST00000472518 ENAHQ8N8S7 591 aaPredicted RBP16.34■□□□□ 0.21
RTKN-207ENST00000472518 ZKSCAN3Q9BRR0 538 aa16.34■□□□□ 0.21
RTKN-207ENST00000472518 GPHNQ9NQX3 736 aaPredicted RBP16.34■□□□□ 0.21
RTKN-207ENST00000472518 MAP3K20Q9NYL2 800 aaKnown RBP16.34■□□□□ 0.21
RTKN-207ENST00000472518 ZSWIM5Q9P217 1185 aa16.34■□□□□ 0.21
RTKN-207ENST00000472518 MRPL11Q9Y3B7 192 aaKnown RBP16.34■□□□□ 0.21
RTKN-207ENST00000472518 IRX5P78411 483 aaPredicted RBP16.33■□□□□ 0.2
RTKN-207ENST00000472518 PTPN11Q06124 597 aaPredicted RBP16.33■□□□□ 0.2
RTKN-207ENST00000472518 TTLL4Q14679 1199 aa16.33■□□□□ 0.2
RTKN-207ENST00000472518 IFIT1BQ5T764 474 aaKnown RBP16.33■□□□□ 0.2
RTKN-207ENST00000472518 OR6J1Q8NGC5 347 aa16.33■□□□□ 0.2
RTKN-207ENST00000472518 IWS1Q96ST2 819 aa16.33■□□□□ 0.2
RTKN-207ENST00000472518 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.33■□□□□ 0.22e-10■□□□□ 10.6
RTKN-207ENST00000472518 MTG1Q9BT17 334 aaPredicted RBP16.33■□□□□ 0.2
RTKN-207ENST00000472518 HIPK3Q9H422 1215 aa16.33■□□□□ 0.2
RTKN-207ENST00000472518 IL23AQ9NPF7 189 aa16.33■□□□□ 0.2
RTKN-207ENST00000472518 U3KPZ7 1027 aaPredicted RBP16.33■□□□□ 0.2
RTKN-207ENST00000472518 KIAA1217Q5T5P2 1943 aa16.33■□□□□ 0.2
RTKN-207ENST00000472518 TRANK1O15050 2925 aa16.32■□□□□ 0.2
RTKN-207ENST00000472518 PFKMP08237 780 aa16.32■□□□□ 0.2
RTKN-207ENST00000472518 GOLGA8HP0CJ92 632 aa16.32■□□□□ 0.2
RTKN-207ENST00000472518 PURAQ00577 322 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms