RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 ZDHHC15Q96MV8 337 aa14.84□□□□□ -0.03
SCAMP4-207ENST00000472442 TUBB2BQ9BVA1 445 aa14.84□□□□□ -0.03
SCAMP4-207ENST00000472442 IGKV6D-41A0A0C4DH26 115 aa14.83□□□□□ -0.03
SCAMP4-207ENST00000472442 RNF40O75150 1001 aa14.83□□□□□ -0.03
SCAMP4-207ENST00000472442 AOC3Q16853 763 aa14.83□□□□□ -0.03
SCAMP4-207ENST00000472442 CLEC10AQ8IUN9 316 aa14.83□□□□□ -0.03
SCAMP4-207ENST00000472442 ELOA2Q8IYF1 753 aaPredicted RBP14.83□□□□□ -0.03
SCAMP4-207ENST00000472442 ACBD3Q9H3P7 528 aa14.83□□□□□ -0.03
SCAMP4-207ENST00000472442 YY1AP1Q9H869 796 aa14.83□□□□□ -0.03
SCAMP4-207ENST00000472442 MED4Q9NPJ6 270 aa14.83□□□□□ -0.03
SCAMP4-207ENST00000472442 RNF216Q9NWF9 866 aaPredicted RBP14.83□□□□□ -0.03
SCAMP4-207ENST00000472442 MTMR4Q9NYA4 1195 aa14.83□□□□□ -0.03
SCAMP4-207ENST00000472442 SERPINB13Q9UIV8 391 aa14.83□□□□□ -0.03
SCAMP4-207ENST00000472442 SHMT1P34896 483 aa14.83□□□□□ -0.04
SCAMP4-207ENST00000472442 TUBB4BP68371 445 aa14.83□□□□□ -0.04
SCAMP4-207ENST00000472442 WHAMMP3Q1A5X7 153 aa14.83□□□□□ -0.04
SCAMP4-207ENST00000472442 NCAPH2Q6IBW4 605 aa14.83□□□□□ -0.04
SCAMP4-207ENST00000472442 BLIDQ8IZY5 108 aa14.83□□□□□ -0.04
SCAMP4-207ENST00000472442 RASGRP4Q8TDF6 673 aa14.83□□□□□ -0.04
SCAMP4-207ENST00000472442 PPM1EQ8WY54 764 aa14.83□□□□□ -0.04
SCAMP4-207ENST00000472442 USP17L5A8MUK1 530 aa14.82□□□□□ -0.04
SCAMP4-207ENST00000472442 CACNB3P54284 484 aa14.82□□□□□ -0.04
SCAMP4-207ENST00000472442 EPSTI1Q96J88 318 aa14.82□□□□□ -0.04
SCAMP4-207ENST00000472442 SPZ1Q9BXG8 430 aa14.82□□□□□ -0.04
SCAMP4-207ENST00000472442 BARHL2Q9NY43 387 aa14.82□□□□□ -0.04
SCAMP4-207ENST00000472442 PCDHA4Q9UN74 947 aa14.82□□□□□ -0.04
SCAMP4-207ENST00000472442 A0A087X0B3 334 aa14.82□□□□□ -0.04
SCAMP4-207ENST00000472442 STXBP3O00186 592 aa14.82□□□□□ -0.04
SCAMP4-207ENST00000472442 PARP1P09874 1014 aaKnown RBP14.82□□□□□ -0.04
SCAMP4-207ENST00000472442 FXR1P51114 621 aaKnown RBP eCLIP14.82□□□□□ -0.04
SCAMP4-207ENST00000472442 PTGDRQ13258 359 aa14.82□□□□□ -0.04
SCAMP4-207ENST00000472442 SKIDA1Q1XH10 827 aa14.82□□□□□ -0.04
SCAMP4-207ENST00000472442 TRIML1Q8N9V2 468 aa14.82□□□□□ -0.04
SCAMP4-207ENST00000472442 LZTS2Q9BRK4 669 aa14.82□□□□□ -0.04
SCAMP4-207ENST00000472442 MRIQ9BWK5 157 aa14.82□□□□□ -0.04
SCAMP4-207ENST00000472442 CALML3P27482 149 aa14.82□□□□□ -0.04
SCAMP4-207ENST00000472442 PBX1P40424 430 aa14.82□□□□□ -0.04
SCAMP4-207ENST00000472442 FKBP1AP62942 108 aaKnown RBP14.82□□□□□ -0.04
SCAMP4-207ENST00000472442 ATP2C1P98194 919 aaPredicted RBP14.82□□□□□ -0.04
SCAMP4-207ENST00000472442 HEATR3Q7Z4Q2 680 aa14.82□□□□□ -0.04
SCAMP4-207ENST00000472442 DRC1Q96MC2 740 aa14.82□□□□□ -0.04
SCAMP4-207ENST00000472442 ADD3Q9UEY8 706 aaKnown RBP14.82□□□□□ -0.04
SCAMP4-207ENST00000472442 SYNRGQ9UMZ2 1314 aa14.81□□□□□ -0.04
SCAMP4-207ENST00000472442 ACTN4O43707 911 aaKnown RBP14.81□□□□□ -0.04
SCAMP4-207ENST00000472442 GYPCP04921 128 aa14.81□□□□□ -0.04
SCAMP4-207ENST00000472442 PDHBP11177 359 aa14.81□□□□□ -0.04
SCAMP4-207ENST00000472442 ERCC5P28715 1186 aaPredicted RBP14.81□□□□□ -0.04
SCAMP4-207ENST00000472442 TRAPPC10P48553 1259 aa14.81□□□□□ -0.04
SCAMP4-207ENST00000472442 EIF6P56537 245 aaKnown RBP14.81□□□□□ -0.04
SCAMP4-207ENST00000472442 AFAP1L1Q8TED9 768 aa14.81□□□□□ -0.04
SCAMP4-207ENST00000472442 PPFIA4O75335 1185 aa14.81□□□□□ -0.04
SCAMP4-207ENST00000472442 IL17AQ16552 155 aa14.81□□□□□ -0.04
SCAMP4-207ENST00000472442 DEFB132Q7Z7B7 95 aa14.81□□□□□ -0.04
SCAMP4-207ENST00000472442 DNAJC18Q9H819 358 aa14.81□□□□□ -0.04
SCAMP4-207ENST00000472442 PCDHA6Q9UN73 950 aa14.81□□□□□ -0.04
SCAMP4-207ENST00000472442 PCDHA8Q9Y5H6 950 aa14.81□□□□□ -0.04
SCAMP4-207ENST00000472442 C21orf2O43822 256 aa14.8□□□□□ -0.04
SCAMP4-207ENST00000472442 SYF2O95926 243 aaKnown RBP14.8□□□□□ -0.04
SCAMP4-207ENST00000472442 BMP15O95972 392 aa14.8□□□□□ -0.04
SCAMP4-207ENST00000472442 GUCY2CP25092 1073 aa14.8□□□□□ -0.04
SCAMP4-207ENST00000472442 ERVK-24P63145 666 aa14.8□□□□□ -0.04
SCAMP4-207ENST00000472442 CNGA4Q8IV77 575 aa14.8□□□□□ -0.04
SCAMP4-207ENST00000472442 LRRC47Q8N1G4 583 aaKnown RBP14.8□□□□□ -0.04
SCAMP4-207ENST00000472442 FERMT2Q96AC1 680 aa14.8□□□□□ -0.04
SCAMP4-207ENST00000472442 SWAP70Q9UH65 585 aa14.8□□□□□ -0.04
SCAMP4-207ENST00000472442 MYO6Q9UM54 1294 aa14.8□□□□□ -0.04
SCAMP4-207ENST00000472442 YDJCA8MPS7 323 aa14.8□□□□□ -0.04
SCAMP4-207ENST00000472442 CD44P16070 742 aaKnown RBP14.8□□□□□ -0.04
SCAMP4-207ENST00000472442 MCM7P33993 719 aa14.8□□□□□ -0.04
SCAMP4-207ENST00000472442 ARHGAP25P42331 645 aa14.8□□□□□ -0.04
SCAMP4-207ENST00000472442 SPATA1Q5VX52 437 aa14.8□□□□□ -0.04
SCAMP4-207ENST00000472442 WDR93Q6P2C0 686 aa14.8□□□□□ -0.04
SCAMP4-207ENST00000472442 C4orf32Q8N8J7 132 aa14.8□□□□□ -0.04
SCAMP4-207ENST00000472442 DAGLBQ8NCG7 672 aa14.8□□□□□ -0.04
SCAMP4-207ENST00000472442 SYMPKQ92797 1274 aaKnown RBP14.8□□□□□ -0.04
SCAMP4-207ENST00000472442 UBA5Q9GZZ9 404 aa14.8□□□□□ -0.04
SCAMP4-207ENST00000472442 FAM198AQ9UFP1 575 aa14.8□□□□□ -0.04
SCAMP4-207ENST00000472442 MYH8P13535 1937 aa14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 CASP1P29466 404 aa14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 TCP10Q12799 353 aa14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 SIPA1L1O43166 1804 aa14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 FRMPD2Q68DX3 1309 aaPredicted RBP14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 DDTLA6NHG4 134 aaPredicted RBP14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 TUBBP07437 444 aa14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 SNHG28P0DPA3 235 aa14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 HDLBPQ00341 1268 aaKnown RBP14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 AMPD2Q01433 879 aa14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 SH3BP5LQ7L8J4 393 aa14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 SMYD4Q8IYR2 804 aaPredicted RBP14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 RIN2Q8WYP3 895 aaPredicted RBP14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 PIGSQ96S52 555 aa14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 VAT1LQ9HCJ6 419 aa14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 MYO3BQ8WXR4 1341 aa14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 PRPF6O94906 941 aaKnown RBP14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 SMARCA1P28370 1054 aa14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 CDC25AP30304 524 aa14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 CCT6AP40227 531 aaKnown RBP14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 AFMP43652 599 aa14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 RBM5P52756 815 aaKnown RBP eCLIP14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 FILIP1LQ4L180 1135 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms