RNA–Protein interactions for RNA: ENST00000472216.2

SPC25-203, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 754 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-203ENST00000472216 SNAI1O95863 264 aaPredicted RBP12.22□□□□□ -0.45
SPC25-203ENST00000472216 HOXD8P13378 290 aaPredicted RBP12.22□□□□□ -0.45
SPC25-203ENST00000472216 FOXC1Q12948 553 aa12.22□□□□□ -0.45
SPC25-203ENST00000472216 ACVR2BQ13705 512 aa12.22□□□□□ -0.45
SPC25-203ENST00000472216 CCDC144BQ3MJ40 725 aa12.22□□□□□ -0.45
SPC25-203ENST00000472216 GINM1Q9NU53 330 aa12.22□□□□□ -0.45
SPC25-203ENST00000472216 HERC5Q9UII4 1024 aaKnown RBP12.22□□□□□ -0.45
SPC25-203ENST00000472216 COL12A1Q99715 3063 aa12.22□□□□□ -0.45
SPC25-203ENST00000472216 C5orf67F2Z3F1 127 aa12.21□□□□□ -0.45
SPC25-203ENST00000472216 H7C1W4 665 aa12.21□□□□□ -0.45
SPC25-203ENST00000472216 GDF9O60383 454 aa12.21□□□□□ -0.45
SPC25-203ENST00000472216 FOXD2O60548 495 aaPredicted RBP12.21□□□□□ -0.45
SPC25-203ENST00000472216 CSPG5O95196 566 aa12.21□□□□□ -0.45
SPC25-203ENST00000472216 ASGR2P07307 311 aa12.21□□□□□ -0.45
SPC25-203ENST00000472216 SPINK2P20155 84 aa12.21□□□□□ -0.45
SPC25-203ENST00000472216 CTNNB1P35222 781 aa12.21□□□□□ -0.45
SPC25-203ENST00000472216 CCR10P46092 362 aa12.21□□□□□ -0.45
SPC25-203ENST00000472216 ZYXQ15942 572 aaKnown RBP12.21□□□□□ -0.45
SPC25-203ENST00000472216 SPECC1Q5M775 1068 aa12.21□□□□□ -0.45
SPC25-203ENST00000472216 MAP4K1Q92918 833 aa12.21□□□□□ -0.45
SPC25-203ENST00000472216 YME1L1Q96TA2 773 aa12.21□□□□□ -0.45
SPC25-203ENST00000472216 FEZ1Q99689 392 aa12.21□□□□□ -0.45
SPC25-203ENST00000472216 KCNK5O95279 499 aa12.2□□□□□ -0.46
SPC25-203ENST00000472216 GLP2RO95838 553 aa12.2□□□□□ -0.46
SPC25-203ENST00000472216 VCAM1P19320 739 aa12.2□□□□□ -0.46
SPC25-203ENST00000472216 USP14P54578 494 aa12.2□□□□□ -0.46
SPC25-203ENST00000472216 GCKRQ14397 625 aa12.2□□□□□ -0.46
SPC25-203ENST00000472216 FSCN1Q16658 493 aaKnown RBP12.2□□□□□ -0.46
SPC25-203ENST00000472216 PRR23CQ6ZRP0 262 aa12.2□□□□□ -0.46
SPC25-203ENST00000472216 C2CD3Q4AC94 2353 aa12.2□□□□□ -0.46
SPC25-203ENST00000472216 TK2O00142 265 aa12.19□□□□□ -0.46
SPC25-203ENST00000472216 TM4SF5O14894 197 aa12.19□□□□□ -0.46
SPC25-203ENST00000472216 PARNO95453 639 aaKnown RBP12.19□□□□□ -0.46
SPC25-203ENST00000472216 AMHP03971 560 aa12.19□□□□□ -0.46
SPC25-203ENST00000472216 NCLP19338 710 aaKnown RBP12.19□□□□□ -0.46
SPC25-203ENST00000472216 NRIP1P48552 1158 aa12.19□□□□□ -0.46
SPC25-203ENST00000472216 COG2Q14746 738 aa12.19□□□□□ -0.46
SPC25-203ENST00000472216 CCDC6Q16204 474 aa12.19□□□□□ -0.46
SPC25-203ENST00000472216 KRT24Q2M2I5 525 aa12.19□□□□□ -0.46
SPC25-203ENST00000472216 TAF7LQ5H9L4 462 aa12.19□□□□□ -0.46
SPC25-203ENST00000472216 NOL8Q76FK4 1167 aaKnown RBP12.19□□□□□ -0.46
SPC25-203ENST00000472216 MYOCDQ8IZQ8 938 aa12.19□□□□□ -0.46
SPC25-203ENST00000472216 MB21D1Q8N884 522 aa12.19□□□□□ -0.46
SPC25-203ENST00000472216 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.19□□□□□ -0.46
SPC25-203ENST00000472216 SPOCK2Q92563 424 aa12.19□□□□□ -0.46
SPC25-203ENST00000472216 NEK1Q96PY6 1258 aa12.19□□□□□ -0.46
SPC25-203ENST00000472216 PHAXQ9H814 394 aaKnown RBP12.19□□□□□ -0.46
SPC25-203ENST00000472216 SEMA4GQ9NTN9 838 aa12.19□□□□□ -0.46
SPC25-203ENST00000472216 WASF3Q9UPY6 502 aa12.19□□□□□ -0.46
SPC25-203ENST00000472216 ASXL3Q9C0F0 2248 aa12.19□□□□□ -0.46
SPC25-203ENST00000472216 C2CD4DB7Z1M9 353 aa12.18□□□□□ -0.46
SPC25-203ENST00000472216 C1QL1O75973 258 aa12.18□□□□□ -0.46
SPC25-203ENST00000472216 DDX58O95786 925 aaKnown RBP12.18□□□□□ -0.46
SPC25-203ENST00000472216 SLC25A27O95847 323 aa12.18□□□□□ -0.46
SPC25-203ENST00000472216 MMP1P03956 469 aa12.18□□□□□ -0.46
SPC25-203ENST00000472216 IGKV5-2P06315 115 aa12.18□□□□□ -0.46
SPC25-203ENST00000472216 LDHBP07195 334 aaKnown RBP12.18□□□□□ -0.46
SPC25-203ENST00000472216 HOXB7P09629 217 aa12.18□□□□□ -0.46
SPC25-203ENST00000472216 JAG1P78504 1218 aa12.18□□□□□ -0.46
SPC25-203ENST00000472216 EVX2Q03828 476 aa12.18□□□□□ -0.46
SPC25-203ENST00000472216 MAMDC4Q6UXC1 1216 aa12.18□□□□□ -0.46
SPC25-203ENST00000472216 CFAP53Q96M91 514 aa12.18□□□□□ -0.46
SPC25-203ENST00000472216 SLC4A5Q9BY07 1137 aa12.18□□□□□ -0.46
SPC25-203ENST00000472216 ABHD16BQ9H3Z7 469 aa12.18□□□□□ -0.46
SPC25-203ENST00000472216 RPAP3Q9H6T3 665 aaPredicted RBP12.18□□□□□ -0.46
SPC25-203ENST00000472216 LIMD1Q9UGP4 676 aa12.18□□□□□ -0.46
SPC25-203ENST00000472216 RAB23Q9ULC3 237 aa12.18□□□□□ -0.46
SPC25-203ENST00000472216 CACNA1IQ9P0X4 2223 aa12.17□□□□□ -0.46
SPC25-203ENST00000472216 PRDX5P30044 214 aa12.17□□□□□ -0.46
SPC25-203ENST00000472216 BMPR1AP36894 532 aa12.17□□□□□ -0.46
SPC25-203ENST00000472216 KCNC4Q03721 635 aa12.17□□□□□ -0.46
SPC25-203ENST00000472216 CSRP2Q16527 193 aa12.17□□□□□ -0.46
SPC25-203ENST00000472216 ADGRD2Q7Z7M1 963 aa12.17□□□□□ -0.46
SPC25-203ENST00000472216 RBM23Q86U06 439 aaKnown RBP12.17□□□□□ -0.46
SPC25-203ENST00000472216 PROSER1Q86XN7 944 aa12.17□□□□□ -0.46
SPC25-203ENST00000472216 SCNM1Q9BWG6 230 aa12.17□□□□□ -0.46
SPC25-203ENST00000472216 FBXO4Q9UKT5 387 aa12.17□□□□□ -0.46
SPC25-203ENST00000472216 CHMP3Q9Y3E7 222 aa12.17□□□□□ -0.46
SPC25-203ENST00000472216 RWDD3Q9Y3V2 267 aa12.17□□□□□ -0.46
SPC25-203ENST00000472216 ZNFX1Q9P2E3 1918 aaKnown RBP12.17□□□□□ -0.46
SPC25-203ENST00000472216 FBN2P35556 2912 aa12.16□□□□□ -0.46
SPC25-203ENST00000472216 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.16□□□□□ -0.46
SPC25-203ENST00000472216 CXCL10P02778 98 aa12.16□□□□□ -0.46
SPC25-203ENST00000472216 DCNP07585 359 aaKnown RBP12.16□□□□□ -0.46
SPC25-203ENST00000472216 LIMK1P53667 647 aa12.16□□□□□ -0.46
SPC25-203ENST00000472216 NEXNQ0ZGT2 675 aa12.16□□□□□ -0.46
SPC25-203ENST00000472216 GPNMBQ14956 572 aa12.16□□□□□ -0.46
SPC25-203ENST00000472216 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.16□□□□□ -0.46
SPC25-203ENST00000472216 RASEFQ8IZ41 740 aa12.16□□□□□ -0.46
SPC25-203ENST00000472216 MAML2Q8IZL2 1156 aaPredicted RBP12.16□□□□□ -0.46
SPC25-203ENST00000472216 CCDC155Q8N6L0 562 aa12.16□□□□□ -0.46
SPC25-203ENST00000472216 ZBTB44Q8NCP5 570 aa12.16□□□□□ -0.46
SPC25-203ENST00000472216 AFAP1L1Q8TED9 768 aa12.16□□□□□ -0.46
SPC25-203ENST00000472216 ZFP91Q96JP5 570 aaPredicted RBP12.16□□□□□ -0.46
SPC25-203ENST00000472216 AP5M1Q9H0R1 490 aa12.16□□□□□ -0.46
SPC25-203ENST00000472216 ZBTB21Q9ULJ3 1066 aa12.16□□□□□ -0.46
SPC25-203ENST00000472216 SIT1Q9Y3P8 196 aa12.16□□□□□ -0.46
SPC25-203ENST00000472216 PSAPL1Q6NUJ1 521 aa12.15□□□□□ -0.46
SPC25-203ENST00000472216 ZDHHC14Q8IZN3 488 aa12.15□□□□□ -0.46
SPC25-203ENST00000472216 SLC39A7Q92504 469 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms