RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 ANKS1AQ92625 1134 aa26.41■■□□□ 1.82
C9orf3-213ENST00000471978 UBA5Q9GZZ9 404 aa26.41■■□□□ 1.82
C9orf3-213ENST00000471978 IL25Q9H293 177 aa26.41■■□□□ 1.82
C9orf3-213ENST00000471978 CPVLQ9H3G5 476 aa26.41■■□□□ 1.82
C9orf3-213ENST00000471978 ZSWIM5Q9P217 1185 aa26.41■■□□□ 1.82
C9orf3-213ENST00000471978 Q9Y3F1 56 aa26.41■■□□□ 1.82
C9orf3-213ENST00000471978 ZEB2O60315 1214 aa26.4■■□□□ 1.82
C9orf3-213ENST00000471978 CABYRO75952 493 aa26.4■■□□□ 1.82
C9orf3-213ENST00000471978 GSPT1P15170 499 aaKnown RBP26.4■■□□□ 1.82
C9orf3-213ENST00000471978 TTC22Q5TAA0 569 aa26.4■■□□□ 1.82
C9orf3-213ENST00000471978 ENAHQ8N8S7 591 aaPredicted RBP26.4■■□□□ 1.82
C9orf3-213ENST00000471978 KRT23Q9C075 422 aa26.4■■□□□ 1.82
C9orf3-213ENST00000471978 TLR3O15455 904 aaKnown RBP26.39■■□□□ 1.82
C9orf3-213ENST00000471978 RPS6P62753 249 aaKnown RBP26.39■■□□□ 1.82
C9orf3-213ENST00000471978 USH1GQ495M9 461 aa26.39■■□□□ 1.82
C9orf3-213ENST00000471978 ZNF697Q5TEC3 545 aa26.39■■□□□ 1.82
C9orf3-213ENST00000471978 FAM126BQ8IXS8 530 aa26.39■■□□□ 1.82
C9orf3-213ENST00000471978 RNPC3Q96LT9 517 aaKnown RBP26.39■■□□□ 1.82
C9orf3-213ENST00000471978 FAM161BQ96MY7 647 aa26.39■■□□□ 1.82
C9orf3-213ENST00000471978 CNNM2Q9H8M5 875 aa26.39■■□□□ 1.82
C9orf3-213ENST00000471978 TNKSO95271 1327 aa26.39■■□□□ 1.81
C9orf3-213ENST00000471978 IRX6P78412 446 aaPredicted RBP26.38■■□□□ 1.81
C9orf3-213ENST00000471978 SMAD3P84022 425 aaKnown RBP26.38■■□□□ 1.81
C9orf3-213ENST00000471978 DUSP28Q4G0W2 176 aa26.38■■□□□ 1.81
C9orf3-213ENST00000471978 WDR11Q9BZH6 1224 aa26.38■■□□□ 1.81
C9orf3-213ENST00000471978 CDC37Q16543 378 aaPredicted RBP26.37■■□□□ 1.81
C9orf3-213ENST00000471978 MFSD5Q6N075 450 aa26.37■■□□□ 1.81
C9orf3-213ENST00000471978 GUCD1Q96NT3 240 aa26.37■■□□□ 1.81
C9orf3-213ENST00000471978 MPHOSPH6Q99547 160 aaKnown RBP26.37■■□□□ 1.81
C9orf3-213ENST00000471978 UBAC1Q9BSL1 405 aa26.37■■□□□ 1.81
C9orf3-213ENST00000471978 PDE4DQ08499 809 aa26.36■■□□□ 1.81
C9orf3-213ENST00000471978 ITGA7Q13683 1181 aa26.36■■□□□ 1.81
C9orf3-213ENST00000471978 ASPRV1Q53RT3 343 aa26.36■■□□□ 1.81
C9orf3-213ENST00000471978 ADGRF4Q8IZF3 695 aa26.36■■□□□ 1.81
C9orf3-213ENST00000471978 SLC43A3Q8NBI5 491 aa26.36■■□□□ 1.81
C9orf3-213ENST00000471978 DNERQ8NFT8 737 aa26.36■■□□□ 1.81
C9orf3-213ENST00000471978 RBM47A0AV96 593 aaKnown RBP26.35■■□□□ 1.81
C9orf3-213ENST00000471978 CD4P01730 458 aa26.35■■□□□ 1.81
C9orf3-213ENST00000471978 PARP1P09874 1014 aaKnown RBP26.35■■□□□ 1.81
C9orf3-213ENST00000471978 RGS22Q8NE09 1264 aa26.35■■□□□ 1.81
C9orf3-213ENST00000471978 RAD50Q92878 1312 aa26.35■■□□□ 1.81
C9orf3-213ENST00000471978 PPIGQ13427 754 aaKnown RBP eCLIP26.34■■□□□ 1.812e-8■□□□□ 10.5
C9orf3-213ENST00000471978 TMEM199Q8N511 208 aa26.34■■□□□ 1.81
C9orf3-213ENST00000471978 RUFY2Q8WXA3 655 aa26.34■■□□□ 1.81
C9orf3-213ENST00000471978 SEZ6LQ9BYH1 1024 aa26.34■■□□□ 1.81
C9orf3-213ENST00000471978 PPP1R12CQ9BZL4 782 aa26.34■■□□□ 1.81
C9orf3-213ENST00000471978 GRIN2DO15399 1336 aa26.34■■□□□ 1.81
C9orf3-213ENST00000471978 ABCB11O95342 1321 aa26.34■■□□□ 1.81
C9orf3-213ENST00000471978 B4DLN1 442 aa26.33■■□□□ 1.81
C9orf3-213ENST00000471978 DHX16O60231 1041 aaKnown RBP26.33■■□□□ 1.81
C9orf3-213ENST00000471978 EDNRBP24530 442 aa26.33■■□□□ 1.81
C9orf3-213ENST00000471978 MRPL12P52815 198 aaKnown RBP26.33■■□□□ 1.81
C9orf3-213ENST00000471978 PSMC6P62333 389 aa26.33■■□□□ 1.81
C9orf3-213ENST00000471978 IFIT1BQ5T764 474 aaKnown RBP26.33■■□□□ 1.81
C9orf3-213ENST00000471978 SEMA6BQ9H3T3 888 aa26.33■■□□□ 1.81
C9orf3-213ENST00000471978 CSF2RAP15509 400 aa26.32■■□□□ 1.8
C9orf3-213ENST00000471978 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.32■■□□□ 1.87e-7■■■□□ 15.2
C9orf3-213ENST00000471978 VAT1LQ9HCJ6 419 aa26.32■■□□□ 1.8
C9orf3-213ENST00000471978 CHMLP26374 656 aa26.31■■□□□ 1.8
C9orf3-213ENST00000471978 CPT1AP50416 773 aa26.31■■□□□ 1.8
C9orf3-213ENST00000471978 PPP2R5BQ15173 497 aa26.31■■□□□ 1.8
C9orf3-213ENST00000471978 QRICH1Q2TAL8 776 aa26.31■■□□□ 1.8
C9orf3-213ENST00000471978 CYB5R4Q7L1T6 521 aa26.31■■□□□ 1.8
C9orf3-213ENST00000471978 C16orf59Q7L2K0 433 aa26.31■■□□□ 1.8
C9orf3-213ENST00000471978 OR6J1Q8NGC5 347 aa26.31■■□□□ 1.8
C9orf3-213ENST00000471978 SCFD2Q8WU76 684 aa26.31■■□□□ 1.8
C9orf3-213ENST00000471978 TBC1D5Q92609 795 aa26.31■■□□□ 1.8
C9orf3-213ENST00000471978 MAF1Q9H063 256 aa26.31■■□□□ 1.8
C9orf3-213ENST00000471978 JMJD4Q9H9V9 463 aa26.31■■□□□ 1.8
C9orf3-213ENST00000471978 POLR3EQ9NVU0 708 aa26.31■■□□□ 1.8
C9orf3-213ENST00000471978 CDH23Q9H251 3354 aa26.31■■□□□ 1.8
C9orf3-213ENST00000471978 UNC80Q8N2C7 3258 aa26.31■■□□□ 1.8
C9orf3-213ENST00000471978 CYP2C18P33260 490 aa26.3■■□□□ 1.8
C9orf3-213ENST00000471978 TRDNQ13061 729 aa26.3■■□□□ 1.8
C9orf3-213ENST00000471978 FBXO11Q86XK2 927 aa26.3■■□□□ 1.8
C9orf3-213ENST00000471978 MCF2L2Q86YR7 1114 aa26.3■■□□□ 1.8
C9orf3-213ENST00000471978 TRPV6Q9H1D0 765 aa26.3■■□□□ 1.8
C9orf3-213ENST00000471978 HIPK3Q9H422 1215 aa26.3■■□□□ 1.8
C9orf3-213ENST00000471978 NKRFO15226 690 aaKnown RBP eCLIP26.29■■□□□ 1.84e-9■■□□□ 12.2
C9orf3-213ENST00000471978 MYL3P08590 195 aa26.29■■□□□ 1.8
C9orf3-213ENST00000471978 PTH1RQ03431 593 aa26.29■■□□□ 1.8
C9orf3-213ENST00000471978 SEC23AQ15436 765 aa26.29■■□□□ 1.8
C9orf3-213ENST00000471978 TMEM240Q5SV17 173 aa26.29■■□□□ 1.8
C9orf3-213ENST00000471978 STAG2Q8N3U4 1231 aa26.29■■□□□ 1.8
C9orf3-213ENST00000471978 CDX2Q99626 313 aaPredicted RBP26.29■■□□□ 1.8
C9orf3-213ENST00000471978 TTYH1Q9H313 450 aaPredicted RBP26.29■■□□□ 1.8
C9orf3-213ENST00000471978 MRPL11Q9Y3B7 192 aaKnown RBP26.29■■□□□ 1.8
C9orf3-213ENST00000471978 U3KPZ7 1027 aaPredicted RBP26.29■■□□□ 1.8
C9orf3-213ENST00000471978 EYSQ5T1H1 3165 aa26.28■■□□□ 1.8
C9orf3-213ENST00000471978 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.28■■□□□ 1.8
C9orf3-213ENST00000471978 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.28■■□□□ 1.8
C9orf3-213ENST00000471978 B4GALT4O60513 344 aa26.28■■□□□ 1.8
C9orf3-213ENST00000471978 CYP21A2P08686 494 aa26.28■■□□□ 1.8
C9orf3-213ENST00000471978 ACRP10323 421 aa26.28■■□□□ 1.8
C9orf3-213ENST00000471978 PURAQ00577 322 aaKnown RBP26.28■■□□□ 1.8
C9orf3-213ENST00000471978 BRDTQ58F21 947 aaPredicted RBP26.28■■□□□ 1.8
C9orf3-213ENST00000471978 SYTL5Q8TDW5 730 aaPredicted RBP26.28■■□□□ 1.8
C9orf3-213ENST00000471978 TAAR1Q96RJ0 339 aa26.28■■□□□ 1.8
C9orf3-213ENST00000471978 GPHNQ9NQX3 736 aaPredicted RBP26.28■■□□□ 1.8
C9orf3-213ENST00000471978 TXNP10599 105 aaKnown RBP26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms