RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 SKIV2LQ15477 1246 aaKnown RBP23.51■■□□□ 1.35
CCDC78-208ENST00000471861 AAK1Q2M2I8 961 aa23.51■■□□□ 1.35
CCDC78-208ENST00000471861 DUSP28Q4G0W2 176 aa23.51■■□□□ 1.35
CCDC78-208ENST00000471861 TMEM67Q5HYA8 995 aa23.51■■□□□ 1.35
CCDC78-208ENST00000471861 KIAA1211Q6ZU35 1233 aa23.51■■□□□ 1.35
CCDC78-208ENST00000471861 PRR12Q9ULL5 1215 aa23.51■■□□□ 1.35
CCDC78-208ENST00000471861 TANC1Q9C0D5 1861 aa23.51■■□□□ 1.35
CCDC78-208ENST00000471861 PATL2C9JE40 543 aaKnown RBP23.5■■□□□ 1.35
CCDC78-208ENST00000471861 PLA2G6O60733 806 aa23.5■■□□□ 1.35
CCDC78-208ENST00000471861 APPP05067 770 aa23.5■■□□□ 1.35
CCDC78-208ENST00000471861 SPRED2Q7Z698 418 aa23.5■■□□□ 1.35
CCDC78-208ENST00000471861 PPP1R13LQ8WUF5 828 aa23.5■■□□□ 1.35
CCDC78-208ENST00000471861 SEC62Q99442 399 aaKnown RBP23.5■■□□□ 1.35
CCDC78-208ENST00000471861 EPHX3Q9H6B9 360 aa23.5■■□□□ 1.35
CCDC78-208ENST00000471861 SCN10AQ9Y5Y9 1956 aa23.49■■□□□ 1.35
CCDC78-208ENST00000471861 COL4A4P53420 1690 aaPredicted RBP23.49■■□□□ 1.35
CCDC78-208ENST00000471861 NSMFQ6X4W1 530 aa23.49■■□□□ 1.35
CCDC78-208ENST00000471861 LRFN3Q9BTN0 628 aa23.49■■□□□ 1.35
CCDC78-208ENST00000471861 ZFYP08048 801 aaPredicted RBP23.48■■□□□ 1.35
CCDC78-208ENST00000471861 TAP1Q03518 808 aa23.48■■□□□ 1.35
CCDC78-208ENST00000471861 SLC9A7Q96T83 725 aa23.48■■□□□ 1.35
CCDC78-208ENST00000471861 IL17RBQ9NRM6 502 aa23.48■■□□□ 1.35
CCDC78-208ENST00000471861 CCPG1Q9ULG6 757 aa23.48■■□□□ 1.35
CCDC78-208ENST00000471861 GTPBP6O43824 516 aaPredicted RBP23.47■■□□□ 1.35
CCDC78-208ENST00000471861 TLL1O43897 1013 aa23.47■■□□□ 1.35
CCDC78-208ENST00000471861 NMT2O60551 498 aa23.47■■□□□ 1.35
CCDC78-208ENST00000471861 SUPT20HL2P0C7V6 817 aa23.47■■□□□ 1.35
CCDC78-208ENST00000471861 PDE4BQ07343 736 aa23.47■■□□□ 1.35
CCDC78-208ENST00000471861 PPARAQ07869 468 aa23.47■■□□□ 1.35
CCDC78-208ENST00000471861 RCSD1Q6JBY9 416 aa23.47■■□□□ 1.35
CCDC78-208ENST00000471861 KHSRPQ92945 711 aaKnown RBP eCLIP23.47■■□□□ 1.35
CCDC78-208ENST00000471861 WDR11Q9BZH6 1224 aa23.47■■□□□ 1.35
CCDC78-208ENST00000471861 POLR3EQ9NVU0 708 aa23.47■■□□□ 1.35
CCDC78-208ENST00000471861 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.47■■□□□ 1.35
CCDC78-208ENST00000471861 PTPRSQ13332 1948 aa23.47■■□□□ 1.35
CCDC78-208ENST00000471861 FOXP2O15409 715 aa23.46■■□□□ 1.35
CCDC78-208ENST00000471861 ICAM1P05362 532 aa23.46■■□□□ 1.35
CCDC78-208ENST00000471861 MYL3P08590 195 aa23.46■■□□□ 1.35
CCDC78-208ENST00000471861 ALDH5A1P51649 535 aaPredicted RBP23.46■■□□□ 1.35
CCDC78-208ENST00000471861 BAATQ14032 418 aaPredicted RBP23.46■■□□□ 1.35
CCDC78-208ENST00000471861 ARNTL2Q8WYA1 636 aa23.46■■□□□ 1.35
CCDC78-208ENST00000471861 INCENPQ9NQS7 918 aa23.46■■□□□ 1.35
CCDC78-208ENST00000471861 STX8Q9UNK0 236 aa23.46■■□□□ 1.35
CCDC78-208ENST00000471861 RBM47A0AV96 593 aaKnown RBP23.45■■□□□ 1.34
CCDC78-208ENST00000471861 NFIBO00712 420 aa23.45■■□□□ 1.34
CCDC78-208ENST00000471861 LPXNO60711 386 aa23.45■■□□□ 1.34
CCDC78-208ENST00000471861 NBPF20Q3BBV1 942 aa23.45■■□□□ 1.34
CCDC78-208ENST00000471861 HERC6Q8IVU3 1022 aa23.45■■□□□ 1.34
CCDC78-208ENST00000471861 RANBP17Q9H2T7 1088 aaKnown RBP23.45■■□□□ 1.34
CCDC78-208ENST00000471861 C11orf16Q9NQ32 467 aa23.45■■□□□ 1.34
CCDC78-208ENST00000471861 COG5Q9UP83 839 aa23.45■■□□□ 1.34
CCDC78-208ENST00000471861 TET1Q8NFU7 2136 aa23.45■■□□□ 1.34
CCDC78-208ENST00000471861 IQCF3P0C7M6 154 aa23.44■■□□□ 1.34
CCDC78-208ENST00000471861 ACTN1P12814 892 aa23.44■■□□□ 1.34
CCDC78-208ENST00000471861 GRB10Q13322 594 aa23.44■■□□□ 1.34
CCDC78-208ENST00000471861 SLC30A10Q6XR72 485 aa23.44■■□□□ 1.34
CCDC78-208ENST00000471861 OR6J1Q8NGC5 347 aa23.44■■□□□ 1.34
CCDC78-208ENST00000471861 PHOSPHO2Q8TCD6 241 aa23.44■■□□□ 1.34
CCDC78-208ENST00000471861 MTG1Q9BT17 334 aaPredicted RBP23.44■■□□□ 1.34
CCDC78-208ENST00000471861 NAPBQ9H115 298 aa23.44■■□□□ 1.34
CCDC78-208ENST00000471861 PITPNM1O00562 1244 aa23.43■■□□□ 1.34
CCDC78-208ENST00000471861 RFC2P35250 354 aa23.43■■□□□ 1.34
CCDC78-208ENST00000471861 NOVP48745 357 aa23.43■■□□□ 1.34
CCDC78-208ENST00000471861 CPT1AP50416 773 aa23.43■■□□□ 1.34
CCDC78-208ENST00000471861 TTBK2Q6IQ55 1244 aa23.43■■□□□ 1.34
CCDC78-208ENST00000471861 NACAP1Q9BZK3 213 aa23.43■■□□□ 1.34
CCDC78-208ENST00000471861 MTMR7Q9Y216 660 aa23.43■■□□□ 1.34
CCDC78-208ENST00000471861 RBAK-RBAKDNI3L0D1 243 aa23.42■■□□□ 1.34
CCDC78-208ENST00000471861 SLC16A2P36021 539 aa23.42■■□□□ 1.34
CCDC78-208ENST00000471861 FAM47CQ5HY64 1035 aa23.42■■□□□ 1.34
CCDC78-208ENST00000471861 C20orf194Q5TEA3 1177 aa23.42■■□□□ 1.34
CCDC78-208ENST00000471861 ARIH1Q9Y4X5 557 aaPredicted RBP23.42■■□□□ 1.34
CCDC78-208ENST00000471861 LCHNA4D1U4 455 aa23.41■■□□□ 1.34
CCDC78-208ENST00000471861 TSPY2A6NKD2 308 aa23.41■■□□□ 1.34
CCDC78-208ENST00000471861 SLC3A2P08195 630 aaKnown RBP23.41■■□□□ 1.34
CCDC78-208ENST00000471861 CTDSPL2Q05D32 466 aa23.41■■□□□ 1.34
CCDC78-208ENST00000471861 ZMYM1Q5SVZ6 1142 aa23.41■■□□□ 1.34
CCDC78-208ENST00000471861 NFRKBQ6P4R8 1299 aa23.41■■□□□ 1.34
CCDC78-208ENST00000471861 COPS5Q92905 334 aa23.41■■□□□ 1.34
CCDC78-208ENST00000471861 HLA-CQ95604 372 aa23.41■■□□□ 1.34
CCDC78-208ENST00000471861 GPATCH3Q96I76 525 aa23.41■■□□□ 1.34
CCDC78-208ENST00000471861 ADD3Q9UEY8 706 aaKnown RBP23.41■■□□□ 1.34
CCDC78-208ENST00000471861 LOC102724159A0A0B4J2E5 919 aa23.4■■□□□ 1.34
CCDC78-208ENST00000471861 GPNMBQ14956 572 aa23.4■■□□□ 1.34
CCDC78-208ENST00000471861 PWP2Q15269 919 aaKnown RBP23.4■■□□□ 1.34
CCDC78-208ENST00000471861 CCDC96Q2M329 555 aa23.4■■□□□ 1.34
CCDC78-208ENST00000471861 TMEM31Q5JXX7 168 aa23.4■■□□□ 1.34
CCDC78-208ENST00000471861 BTNL9Q6UXG8 535 aa23.4■■□□□ 1.34
CCDC78-208ENST00000471861 CLEC4DQ8WXI8 215 aa23.4■■□□□ 1.34
CCDC78-208ENST00000471861 CTAGE1Q96RT6 745 aa23.4■■□□□ 1.34
CCDC78-208ENST00000471861 HCN4Q9Y3Q4 1203 aa23.4■■□□□ 1.34
CCDC78-208ENST00000471861 PTPDC1A2A3K4 754 aa23.39■■□□□ 1.33
CCDC78-208ENST00000471861 A6NJR5 290 aa23.39■■□□□ 1.33
CCDC78-208ENST00000471861 EDNRBP24530 442 aa23.39■■□□□ 1.33
CCDC78-208ENST00000471861 PPP4R3BQ5MIZ7 849 aa23.39■■□□□ 1.33
CCDC78-208ENST00000471861 TMCO2Q7Z6W1 182 aaPredicted RBP23.39■■□□□ 1.33
CCDC78-208ENST00000471861 PI4K2BQ8TCG2 481 aa23.39■■□□□ 1.33
CCDC78-208ENST00000471861 DCAF4Q8WV16 495 aa23.39■■□□□ 1.33
CCDC78-208ENST00000471861 FTOQ9C0B1 505 aaKnown RBP eCLIP23.39■■□□□ 1.33
CCDC78-208ENST00000471861 CHMP4BQ9H444 224 aaKnown RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms