RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 IFNGR1P15260 489 aa8.76□□□□□ -1.01
SMC5-202ENST00000471372 GPR85P60893 370 aa8.76□□□□□ -1.01
SMC5-202ENST00000471372 MLC1Q15049 377 aa8.76□□□□□ -1.01
SMC5-202ENST00000471372 GRIK4Q16099 956 aa8.76□□□□□ -1.01
SMC5-202ENST00000471372 FAM102BQ5T8I3 360 aa8.76□□□□□ -1.01
SMC5-202ENST00000471372 CCDC103Q8IW40 242 aa8.76□□□□□ -1.01
SMC5-202ENST00000471372 TCEAL8Q8IYN2 117 aa8.76□□□□□ -1.01
SMC5-202ENST00000471372 IFNL3Q8IZI9 196 aa8.76□□□□□ -1.01
SMC5-202ENST00000471372 NEDD1Q8NHV4 660 aa8.76□□□□□ -1.01
SMC5-202ENST00000471372 EZH1Q92800 747 aaPredicted RBP8.76□□□□□ -1.01
SMC5-202ENST00000471372 RHOBTB2Q9BYZ6 727 aa8.76□□□□□ -1.01
SMC5-202ENST00000471372 AKTIPQ9H8T0 292 aa8.76□□□□□ -1.01
SMC5-202ENST00000471372 ARNT2Q9HBZ2 717 aa8.76□□□□□ -1.01
SMC5-202ENST00000471372 VTA1Q9NP79 307 aa8.76□□□□□ -1.01
SMC5-202ENST00000471372 NPFFR2Q9Y5X5 522 aa8.76□□□□□ -1.01
SMC5-202ENST00000471372 BACE2Q9Y5Z0 518 aa8.76□□□□□ -1.01
SMC5-202ENST00000471372 C2orf71A6NGG8 1288 aa8.75□□□□□ -1.01
SMC5-202ENST00000471372 MEFVO15553 781 aaPredicted RBP8.75□□□□□ -1.01
SMC5-202ENST00000471372 LEFTY1O75610 366 aa8.75□□□□□ -1.01
SMC5-202ENST00000471372 GSNP06396 782 aa8.75□□□□□ -1.01
SMC5-202ENST00000471372 CKMP06732 381 aa8.75□□□□□ -1.01
SMC5-202ENST00000471372 SRGAP2CP0DJJ0 459 aa8.75□□□□□ -1.01
SMC5-202ENST00000471372 LCP1P13796 627 aa8.75□□□□□ -1.01
SMC5-202ENST00000471372 GLB1P16278 677 aa8.75□□□□□ -1.01
SMC5-202ENST00000471372 NAT1P18440 290 aa8.75□□□□□ -1.01
SMC5-202ENST00000471372 CYP7A1P22680 504 aa8.75□□□□□ -1.01
SMC5-202ENST00000471372 PTPN21Q16825 1174 aa8.75□□□□□ -1.01
SMC5-202ENST00000471372 ACBD5Q5T8D3 534 aaPredicted RBP8.75□□□□□ -1.01
SMC5-202ENST00000471372 SMC5Q8IY18 1101 aa8.75□□□□□ -1.01
SMC5-202ENST00000471372 CBARPQ8N350 705 aaPredicted RBP8.75□□□□□ -1.01
SMC5-202ENST00000471372 ZNF526Q8TF50 670 aaPredicted RBP8.75□□□□□ -1.01
SMC5-202ENST00000471372 JPH3Q8WXH2 748 aaPredicted RBP8.75□□□□□ -1.01
SMC5-202ENST00000471372 UBL7Q96S82 380 aaPredicted RBP8.75□□□□□ -1.01
SMC5-202ENST00000471372 SPOCK3Q9BQ16 436 aa8.75□□□□□ -1.01
SMC5-202ENST00000471372 ZFYVE21Q9BQ24 234 aa8.75□□□□□ -1.01
SMC5-202ENST00000471372 RNF112Q9ULX5 631 aa8.75□□□□□ -1.01
SMC5-202ENST00000471372 SPEF1Q9Y4P9 236 aa8.75□□□□□ -1.01
SMC5-202ENST00000471372 GAS7O60861 476 aa8.74□□□□□ -1.01
SMC5-202ENST00000471372 CBX7O95931 251 aa8.74□□□□□ -1.01
SMC5-202ENST00000471372 ZSCAN20P17040 1043 aaPredicted RBP8.74□□□□□ -1.01
SMC5-202ENST00000471372 ATP13A4Q4VNC1 1196 aa8.74□□□□□ -1.01
SMC5-202ENST00000471372 CWF19L1Q69YN2 538 aaKnown RBP8.74□□□□□ -1.01
SMC5-202ENST00000471372 NXNQ6DKJ4 435 aa8.74□□□□□ -1.01
SMC5-202ENST00000471372 RSPO2Q6UXX9 243 aaPredicted RBP8.74□□□□□ -1.01
SMC5-202ENST00000471372 PCDH19Q8TAB3 1148 aa8.74□□□□□ -1.01
SMC5-202ENST00000471372 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.74□□□□□ -1.01
SMC5-202ENST00000471372 FCRL3Q96P31 734 aaPredicted RBP8.74□□□□□ -1.01
SMC5-202ENST00000471372 CAMKK2Q96RR4 588 aa8.74□□□□□ -1.01
SMC5-202ENST00000471372 DUSP23Q9BVJ7 150 aa8.74□□□□□ -1.01
SMC5-202ENST00000471372 YIPF2Q9BWQ6 316 aa8.74□□□□□ -1.01
SMC5-202ENST00000471372 CEP41Q9BYV8 373 aa8.74□□□□□ -1.01
SMC5-202ENST00000471372 EMC7Q9NPA0 242 aa8.74□□□□□ -1.01
SMC5-202ENST00000471372 CHST12Q9NRB3 414 aa8.74□□□□□ -1.01
SMC5-202ENST00000471372 C1GALT1Q9NS00 363 aa8.74□□□□□ -1.01
SMC5-202ENST00000471372 GPR27Q9NS67 375 aa8.74□□□□□ -1.01
SMC5-202ENST00000471372 SPTLC3Q9NUV7 552 aa8.74□□□□□ -1.01
SMC5-202ENST00000471372 THG1LQ9NWX6 298 aaKnown RBP8.74□□□□□ -1.01
SMC5-202ENST00000471372 IP6K2Q9UHH9 426 aa8.74□□□□□ -1.01
SMC5-202ENST00000471372 PLIN1O60240 522 aa8.73□□□□□ -1.01
SMC5-202ENST00000471372 PLS3P13797 630 aa8.73□□□□□ -1.01
SMC5-202ENST00000471372 IARSP41252 1262 aaKnown RBP8.73□□□□□ -1.01
SMC5-202ENST00000471372 TESK1Q15569 626 aa8.73□□□□□ -1.01
SMC5-202ENST00000471372 SYCP2LQ5T4T6 812 aa8.73□□□□□ -1.01
SMC5-202ENST00000471372 LBX2Q6XYB7 198 aa8.73□□□□□ -1.01
SMC5-202ENST00000471372 Q6ZS46 218 aa8.73□□□□□ -1.01
SMC5-202ENST00000471372 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.73□□□□□ -1.01
SMC5-202ENST00000471372 PODNQ7Z5L7 613 aa8.73□□□□□ -1.01
SMC5-202ENST00000471372 MAGEB6Q8N7X4 407 aa8.73□□□□□ -1.01
SMC5-202ENST00000471372 CHTF18Q8WVB6 975 aa8.73□□□□□ -1.01
SMC5-202ENST00000471372 FAM46AQ96IP4 442 aaKnown RBP8.73□□□□□ -1.01
SMC5-202ENST00000471372 HDAC8Q9BY41 377 aa8.73□□□□□ -1.01
SMC5-202ENST00000471372 ASCC2Q9H1I8 757 aaPredicted RBP8.73□□□□□ -1.01
SMC5-202ENST00000471372 CLEC1BQ9P126 229 aa8.73□□□□□ -1.01
SMC5-202ENST00000471372 KCNH3Q9ULD8 1083 aa8.73□□□□□ -1.01
SMC5-202ENST00000471372 ZKSCAN5Q9Y2L8 839 aa8.73□□□□□ -1.01
SMC5-202ENST00000471372 GNB5O14775 395 aa8.72□□□□□ -1.01
SMC5-202ENST00000471372 RFPL1O75677 317 aa8.72□□□□□ -1.01
SMC5-202ENST00000471372 MT-CO1P00395 513 aa8.72□□□□□ -1.01
SMC5-202ENST00000471372 MYL1P05976 194 aa8.72□□□□□ -1.01
SMC5-202ENST00000471372 MYBL2P10244 700 aa8.72□□□□□ -1.01
SMC5-202ENST00000471372 ATP2A2P16615 1042 aaKnown RBP8.72□□□□□ -1.01
SMC5-202ENST00000471372 LTBRP36941 435 aa8.72□□□□□ -1.01
SMC5-202ENST00000471372 LSSP48449 732 aa8.72□□□□□ -1.01
SMC5-202ENST00000471372 ERVK-21P61565 698 aa8.72□□□□□ -1.01
SMC5-202ENST00000471372 PAK1Q13153 545 aa8.72□□□□□ -1.01
SMC5-202ENST00000471372 TMEM177Q53S58 311 aa8.72□□□□□ -1.01
SMC5-202ENST00000471372 SFRP5Q5T4F7 317 aa8.72□□□□□ -1.01
SMC5-202ENST00000471372 SLC39A13Q96H72 371 aa8.72□□□□□ -1.01
SMC5-202ENST00000471372 MENTQ9BUN1 341 aa8.72□□□□□ -1.01
SMC5-202ENST00000471372 CELF4Q9BZC1 486 aaKnown RBP8.72□□□□□ -1.01
SMC5-202ENST00000471372 CABP5Q9NP86 173 aa8.72□□□□□ -1.01
SMC5-202ENST00000471372 LUC7LQ9NQ29 371 aaKnown RBP8.72□□□□□ -1.01
SMC5-202ENST00000471372 PRDM5Q9NQX1 630 aaPredicted RBP8.72□□□□□ -1.01
SMC5-202ENST00000471372 B4GALT6Q9UBX8 382 aa8.72□□□□□ -1.01
SMC5-202ENST00000471372 USP21Q9UK80 565 aa8.72□□□□□ -1.01
SMC5-202ENST00000471372 LUC7L2Q9Y383 392 aaKnown RBP8.72□□□□□ -1.01
SMC5-202ENST00000471372 CNTNAP5Q8WYK1 1306 aa8.72□□□□□ -1.01
SMC5-202ENST00000471372 PRR33A8MZF0 331 aa8.71□□□□□ -1.02
SMC5-202ENST00000471372 K7ESF4 209 aa8.71□□□□□ -1.02
SMC5-202ENST00000471372 RXRBP28702 533 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms