RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 SNCAIPQ9Y6H5 919 aa29.42■■■□□ 2.3
U2AF1-208ENST00000471250 WDR90Q96KV7 1748 aa29.41■■■□□ 2.3
U2AF1-208ENST00000471250 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP29.41■■■□□ 2.3
U2AF1-208ENST00000471250 ICAM1P05362 532 aa29.41■■■□□ 2.3
U2AF1-208ENST00000471250 MDM2Q00987 491 aaPredicted RBP29.41■■■□□ 2.3
U2AF1-208ENST00000471250 KANK3Q6NY19 840 aa29.41■■■□□ 2.3
U2AF1-208ENST00000471250 POTEDQ86YR6 584 aa29.41■■■□□ 2.3
U2AF1-208ENST00000471250 PYM1Q9BRP8 204 aaKnown RBP29.41■■■□□ 2.3
U2AF1-208ENST00000471250 POTECB2RU33 542 aa29.4■■■□□ 2.3
U2AF1-208ENST00000471250 CAVIN2O95810 425 aa29.4■■■□□ 2.3
U2AF1-208ENST00000471250 FAM200AQ8TCP9 573 aa29.4■■■□□ 2.3
U2AF1-208ENST00000471250 CDCA5Q96FF9 252 aa29.4■■■□□ 2.3
U2AF1-208ENST00000471250 ANO10Q9NW15 660 aa29.4■■■□□ 2.3
U2AF1-208ENST00000471250 TUBE1Q9UJT0 475 aa29.4■■■□□ 2.3
U2AF1-208ENST00000471250 PARP14Q460N5 1801 aa29.4■■■□□ 2.3
U2AF1-208ENST00000471250 ZNF536O15090 1300 aa29.4■■■□□ 2.3
U2AF1-208ENST00000471250 SLC37A4O43826 429 aa29.4■■■□□ 2.3
U2AF1-208ENST00000471250 FLOT1O75955 427 aa29.4■■■□□ 2.3
U2AF1-208ENST00000471250 VGLL4Q14135 290 aa29.4■■■□□ 2.3
U2AF1-208ENST00000471250 CALCRLQ16602 461 aa29.4■■■□□ 2.3
U2AF1-208ENST00000471250 CRYGNQ8WXF5 182 aa29.4■■■□□ 2.3
U2AF1-208ENST00000471250 DHX58Q96C10 678 aa29.4■■■□□ 2.3
U2AF1-208ENST00000471250 SLC38A10Q9HBR0 1119 aa29.4■■■□□ 2.3
U2AF1-208ENST00000471250 OTOFQ9HC10 1997 aa29.4■■■□□ 2.3
U2AF1-208ENST00000471250 SPDYE3A6NKU9 549 aa29.39■■■□□ 2.3
U2AF1-208ENST00000471250 TXLNAP40222 546 aa29.39■■■□□ 2.3
U2AF1-208ENST00000471250 IREB2P48200 963 aaKnown RBP29.39■■■□□ 2.3
U2AF1-208ENST00000471250 HMGCS2P54868 508 aa29.39■■■□□ 2.3
U2AF1-208ENST00000471250 MOXD1Q6UVY6 613 aa29.39■■■□□ 2.3
U2AF1-208ENST00000471250 AK8Q96MA6 479 aa29.39■■■□□ 2.3
U2AF1-208ENST00000471250 CYP3A7-CYP3A51PA0A087WV96 503 aa29.38■■■□□ 2.29
U2AF1-208ENST00000471250 SLFN14P0C7P3 912 aa29.38■■■□□ 2.29
U2AF1-208ENST00000471250 FDX1P10109 184 aa29.38■■■□□ 2.29
U2AF1-208ENST00000471250 CYP3A7P24462 503 aa29.38■■■□□ 2.29
U2AF1-208ENST00000471250 NF2P35240 595 aa29.38■■■□□ 2.29
U2AF1-208ENST00000471250 PNOCQ13519 176 aa29.38■■■□□ 2.29
U2AF1-208ENST00000471250 CCSER1Q9C0I3 900 aa29.38■■■□□ 2.29
U2AF1-208ENST00000471250 DNAJC25Q9H1X3 360 aa29.38■■■□□ 2.29
U2AF1-208ENST00000471250 DDX25Q9UHL0 483 aaKnown RBP29.38■■■□□ 2.29
U2AF1-208ENST00000471250 CCPG1Q9ULG6 757 aa29.38■■■□□ 2.29
U2AF1-208ENST00000471250 CSADQ9Y600 493 aa29.38■■■□□ 2.29
U2AF1-208ENST00000471250 GCOM1H8Y6P7 765 aaPredicted RBP29.37■■■□□ 2.29
U2AF1-208ENST00000471250 POLR2MP0CAP2 368 aa29.37■■■□□ 2.29
U2AF1-208ENST00000471250 SH3D19Q5HYK7 790 aa29.37■■■□□ 2.29
U2AF1-208ENST00000471250 PNMA8AQ86V59 439 aaPredicted RBP29.37■■■□□ 2.29
U2AF1-208ENST00000471250 CCDC34Q96HJ3 373 aa29.37■■■□□ 2.29
U2AF1-208ENST00000471250 AGBL1Q96MI9 1066 aa29.37■■■□□ 2.29
U2AF1-208ENST00000471250 MBOAT7Q96N66 472 aa29.37■■■□□ 2.29
U2AF1-208ENST00000471250 FOXN1O15353 648 aa29.37■■■□□ 2.29
U2AF1-208ENST00000471250 HOXA13P31271 388 aaPredicted RBP29.37■■■□□ 2.29
U2AF1-208ENST00000471250 SREBF1P36956 1147 aa29.37■■■□□ 2.29
U2AF1-208ENST00000471250 ARHGAP4P98171 946 aa29.37■■■□□ 2.29
U2AF1-208ENST00000471250 POSTNQ15063 836 aa29.37■■■□□ 2.29
U2AF1-208ENST00000471250 E2F4Q16254 413 aa29.37■■■□□ 2.29
U2AF1-208ENST00000471250 EAPPQ56P03 285 aaPredicted RBP29.37■■■□□ 2.29
U2AF1-208ENST00000471250 IQUBQ8NA54 791 aa29.37■■■□□ 2.29
U2AF1-208ENST00000471250 TMOD4Q9NZQ9 345 aa29.37■■■□□ 2.29
U2AF1-208ENST00000471250 UTRNP46939 3433 aa29.37■■■□□ 2.29
U2AF1-208ENST00000471250 SH3RF1Q7Z6J0 888 aa29.36■■■□□ 2.29
U2AF1-208ENST00000471250 CEP57L1Q8IYX8 460 aa29.36■■■□□ 2.29
U2AF1-208ENST00000471250 RBM46Q8TBY0 533 aaKnown RBP29.36■■■□□ 2.29
U2AF1-208ENST00000471250 TBC1D5Q92609 795 aa29.36■■■□□ 2.29
U2AF1-208ENST00000471250 ANP32BQ92688 251 aaKnown RBP29.36■■■□□ 2.29
U2AF1-208ENST00000471250 CBX8Q9HC52 389 aa29.36■■■□□ 2.29
U2AF1-208ENST00000471250 PNMA2Q9UL42 364 aa29.36■■■□□ 2.29
U2AF1-208ENST00000471250 ZBED4O75132 1171 aa29.35■■■□□ 2.29
U2AF1-208ENST00000471250 CFBP00751 764 aa29.35■■■□□ 2.29
U2AF1-208ENST00000471250 FXR2P51116 673 aaKnown RBP eCLIP29.35■■■□□ 2.29
U2AF1-208ENST00000471250 NLRP12P59046 1061 aa29.35■■■□□ 2.29
U2AF1-208ENST00000471250 ZRSR1Q15695 479 aaKnown RBP29.35■■■□□ 2.29
U2AF1-208ENST00000471250 RLFQ13129 1914 aa29.35■■■□□ 2.29
U2AF1-208ENST00000471250 CDC25AP30304 524 aa29.34■■■□□ 2.29
U2AF1-208ENST00000471250 TECP42680 631 aa29.34■■■□□ 2.29
U2AF1-208ENST00000471250 TXKP42681 527 aa29.34■■■□□ 2.29
U2AF1-208ENST00000471250 ZNF165P49910 485 aa29.34■■■□□ 2.29
U2AF1-208ENST00000471250 C11orf57Q6ZUT1 292 aaPredicted RBP29.34■■■□□ 2.29
U2AF1-208ENST00000471250 IGSF22Q8N9C0 903 aa29.34■■■□□ 2.29
U2AF1-208ENST00000471250 PCDHA5Q9Y5H7 936 aa29.34■■■□□ 2.29
U2AF1-208ENST00000471250 A0A087WWV3 80 aa29.34■■■□□ 2.29
U2AF1-208ENST00000471250 PP2D1A8MPX8 630 aa29.34■■■□□ 2.29
U2AF1-208ENST00000471250 UBA7P41226 1012 aa29.34■■■□□ 2.29
U2AF1-208ENST00000471250 RAVER2Q9HCJ3 691 aaKnown RBP29.34■■■□□ 2.29
U2AF1-208ENST00000471250 VWA5AO00534 786 aa29.33■■■□□ 2.29
U2AF1-208ENST00000471250 CYP3A4P08684 503 aa29.33■■■□□ 2.29
U2AF1-208ENST00000471250 PRR29P0C7W0 189 aa29.33■■■□□ 2.29
U2AF1-208ENST00000471250 CIITAP33076 1130 aa29.33■■■□□ 2.29
U2AF1-208ENST00000471250 TMEM266Q2M3C6 531 aa29.33■■■□□ 2.29
U2AF1-208ENST00000471250 CATSPERGQ6ZRH7 1159 aa29.33■■■□□ 2.29
U2AF1-208ENST00000471250 HAS1Q92839 578 aa29.33■■■□□ 2.29
U2AF1-208ENST00000471250 PAGE5Q96GU1 130 aa29.33■■■□□ 2.29
U2AF1-208ENST00000471250 DISC1Q9NRI5 854 aa29.33■■■□□ 2.29
U2AF1-208ENST00000471250 CTDP1Q9Y5B0 961 aaPredicted RBP29.33■■■□□ 2.29
U2AF1-208ENST00000471250 DSG3P32926 999 aa29.32■■■□□ 2.28
U2AF1-208ENST00000471250 PDIA5Q14554 519 aa29.32■■■□□ 2.28
U2AF1-208ENST00000471250 NT5DC1Q5TFE4 455 aa29.32■■■□□ 2.28
U2AF1-208ENST00000471250 PDXDC2PQ6P474 469 aa29.32■■■□□ 2.28
U2AF1-208ENST00000471250 FCHSD1Q86WN1 690 aa29.32■■■□□ 2.28
U2AF1-208ENST00000471250 GRAMD1CQ8IYS0 662 aa29.32■■■□□ 2.28
U2AF1-208ENST00000471250 ANKRD13AQ8IZ07 590 aa29.32■■■□□ 2.28
U2AF1-208ENST00000471250 CLEC4DQ8WXI8 215 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms