RNA–Protein interactions for RNA: ENST00000471049.5

EXOSC1-205, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 642 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-205ENST00000471049 HOXA7P31268 230 aaPredicted RBP10.09□□□□□ -0.79
EXOSC1-205ENST00000471049 CYP2C18P33260 490 aa10.09□□□□□ -0.79
EXOSC1-205ENST00000471049 USP14P54578 494 aa10.09□□□□□ -0.79
EXOSC1-205ENST00000471049 RBM10P98175 930 aaKnown RBP10.09□□□□□ -0.79
EXOSC1-205ENST00000471049 SEPT2Q15019 361 aa10.09□□□□□ -0.79
EXOSC1-205ENST00000471049 SKOR2Q2VWA4 1001 aaPredicted RBP10.09□□□□□ -0.79
EXOSC1-205ENST00000471049 SBK1Q52WX2 424 aa10.09□□□□□ -0.79
EXOSC1-205ENST00000471049 TAF3Q5VWG9 929 aa10.09□□□□□ -0.79
EXOSC1-205ENST00000471049 TMEM179Q6ZVK1 233 aa10.09□□□□□ -0.79
EXOSC1-205ENST00000471049 C16orf86Q6ZW13 317 aa10.09□□□□□ -0.79
EXOSC1-205ENST00000471049 SPRED2Q7Z698 418 aa10.09□□□□□ -0.79
EXOSC1-205ENST00000471049 PLEKHM2Q8IWE5 1019 aa10.09□□□□□ -0.79
EXOSC1-205ENST00000471049 KCNG4Q8TDN1 519 aa10.09□□□□□ -0.79
EXOSC1-205ENST00000471049 GDPD5Q8WTR4 605 aa10.09□□□□□ -0.79
EXOSC1-205ENST00000471049 CCDC17Q96LX7 622 aa10.09□□□□□ -0.79
EXOSC1-205ENST00000471049 SEC62Q99442 399 aaKnown RBP10.09□□□□□ -0.79
EXOSC1-205ENST00000471049 NACAP1Q9BZK3 213 aa10.09□□□□□ -0.79
EXOSC1-205ENST00000471049 CWC22Q9HCG8 908 aaKnown RBP10.09□□□□□ -0.79
EXOSC1-205ENST00000471049 EMILIN3Q9NT22 766 aa10.09□□□□□ -0.79
EXOSC1-205ENST00000471049 RBPJLQ9UBG7 517 aa10.09□□□□□ -0.79
EXOSC1-205ENST00000471049 USP9XQ93008 2570 aaPredicted RBP10.08□□□□□ -0.8
EXOSC1-205ENST00000471049 PATL2C9JE40 543 aaKnown RBP10.08□□□□□ -0.8
EXOSC1-205ENST00000471049 AKR1B1P15121 316 aa10.08□□□□□ -0.8
EXOSC1-205ENST00000471049 GUCY1A2P33402 732 aa10.08□□□□□ -0.8
EXOSC1-205ENST00000471049 ATXN1P54253 815 aaKnown RBP10.08□□□□□ -0.8
EXOSC1-205ENST00000471049 ERVK-9P63128 1117 aa10.08□□□□□ -0.8
EXOSC1-205ENST00000471049 ERVK-24P63145 666 aa10.08□□□□□ -0.8
EXOSC1-205ENST00000471049 HS1BP3Q53T59 392 aa10.08□□□□□ -0.8
EXOSC1-205ENST00000471049 RNF180Q86T96 592 aa10.08□□□□□ -0.8
EXOSC1-205ENST00000471049 TICAM2Q86XR7 235 aa10.08□□□□□ -0.8
EXOSC1-205ENST00000471049 IFNL3Q8IZI9 196 aa10.08□□□□□ -0.8
EXOSC1-205ENST00000471049 STK11IPQ8N1F8 1099 aa10.08□□□□□ -0.8
EXOSC1-205ENST00000471049 NPLOC4Q8TAT6 608 aa10.08□□□□□ -0.8
EXOSC1-205ENST00000471049 ACER1Q8TDN7 264 aa10.08□□□□□ -0.8
EXOSC1-205ENST00000471049 ANP32BQ92688 251 aaKnown RBP10.08□□□□□ -0.8
EXOSC1-205ENST00000471049 RILPL2Q969X0 211 aa10.08□□□□□ -0.8
EXOSC1-205ENST00000471049 KIAA1683Q9H0B3 1180 aa10.08□□□□□ -0.8
EXOSC1-205ENST00000471049 OSBPL3Q9H4L5 887 aa10.08□□□□□ -0.8
EXOSC1-205ENST00000471049 MKNK2Q9HBH9 465 aa10.08□□□□□ -0.8
EXOSC1-205ENST00000471049 ARHGEF10LQ9HCE6 1279 aa10.08□□□□□ -0.8
EXOSC1-205ENST00000471049 EPB41L4AQ9HCS5 686 aaPredicted RBP10.08□□□□□ -0.8
EXOSC1-205ENST00000471049 STARD7Q9NQZ5 370 aa10.08□□□□□ -0.8
EXOSC1-205ENST00000471049 HELLSQ9NRZ9 838 aa10.08□□□□□ -0.8
EXOSC1-205ENST00000471049 ROBO3Q96MS0 1386 aa10.08□□□□□ -0.8
EXOSC1-205ENST00000471049 XRCC6P12956 609 aaKnown RBP eCLIP10.07□□□□□ -0.8
EXOSC1-205ENST00000471049 ICA1Q05084 483 aa10.07□□□□□ -0.8
EXOSC1-205ENST00000471049 SMAD2Q15796 467 aaKnown RBP10.07□□□□□ -0.8
EXOSC1-205ENST00000471049 C12orf42Q96LP6 360 aa10.07□□□□□ -0.8
EXOSC1-205ENST00000471049 NAPBQ9H115 298 aa10.07□□□□□ -0.8
EXOSC1-205ENST00000471049 SH2D4AQ9H788 454 aa10.07□□□□□ -0.8
EXOSC1-205ENST00000471049 ZNF287Q9HBT7 754 aa10.07□□□□□ -0.8
EXOSC1-205ENST00000471049 MROH7Q68CQ1 1323 aa10.07□□□□□ -0.8
EXOSC1-205ENST00000471049 SLC15A5A6NIM6 579 aa10.06□□□□□ -0.8
EXOSC1-205ENST00000471049 USP17L15C9J2P7 530 aa10.06□□□□□ -0.8
EXOSC1-205ENST00000471049 USP17L13C9JLJ4 530 aa10.06□□□□□ -0.8
EXOSC1-205ENST00000471049 USP17L11C9JVI0 530 aa10.06□□□□□ -0.8
EXOSC1-205ENST00000471049 USP17L18D6R9N7 530 aa10.06□□□□□ -0.8
EXOSC1-205ENST00000471049 USP17L22D6RA61 530 aa10.06□□□□□ -0.8
EXOSC1-205ENST00000471049 USP17L17D6RBQ6 530 aa10.06□□□□□ -0.8
EXOSC1-205ENST00000471049 USP17L19D6RCP7 530 aa10.06□□□□□ -0.8
EXOSC1-205ENST00000471049 USP17L20D6RJB6 530 aa10.06□□□□□ -0.8
EXOSC1-205ENST00000471049 LMNAP02545 664 aaKnown RBP10.06□□□□□ -0.8
EXOSC1-205ENST00000471049 SLC3A2P08195 630 aaKnown RBP10.06□□□□□ -0.8
EXOSC1-205ENST00000471049 VCAM1P19320 739 aa10.06□□□□□ -0.8
EXOSC1-205ENST00000471049 HERVK_113P62684 666 aa10.06□□□□□ -0.8
EXOSC1-205ENST00000471049 USP17L24Q0WX57 530 aa10.06□□□□□ -0.8
EXOSC1-205ENST00000471049 NMIQ13287 307 aaPredicted RBP10.06□□□□□ -0.8
EXOSC1-205ENST00000471049 C8orf34Q49A92 452 aa10.06□□□□□ -0.8
EXOSC1-205ENST00000471049 MCMDC2Q4G0Z9 681 aa10.06□□□□□ -0.8
EXOSC1-205ENST00000471049 CLEC10AQ8IUN9 316 aa10.06□□□□□ -0.8
EXOSC1-205ENST00000471049 GTF3C2Q8WUA4 911 aaPredicted RBP10.06□□□□□ -0.8
EXOSC1-205ENST00000471049 KANSL2Q9H9L4 492 aa10.06□□□□□ -0.8
EXOSC1-205ENST00000471049 XPNPEP3Q9NQH7 507 aa10.06□□□□□ -0.8
EXOSC1-205ENST00000471049 SPEGQ15772 3267 aa10.06□□□□□ -0.8
EXOSC1-205ENST00000471049 MYH6P13533 1939 aa10.05□□□□□ -0.8
EXOSC1-205ENST00000471049 A0A0D9SFI3 127 aa10.05□□□□□ -0.8
EXOSC1-205ENST00000471049 A0A1W2PRG0 241 aa10.05□□□□□ -0.8
EXOSC1-205ENST00000471049 KIF28PB7ZC32 967 aa10.05□□□□□ -0.8
EXOSC1-205ENST00000471049 PGK1P00558 417 aa10.05□□□□□ -0.8
EXOSC1-205ENST00000471049 PDGFBP01127 241 aaPredicted RBP10.05□□□□□ -0.8
EXOSC1-205ENST00000471049 EEF2P13639 858 aaKnown RBP10.05□□□□□ -0.8
EXOSC1-205ENST00000471049 RASA1P20936 1047 aa10.05□□□□□ -0.8
EXOSC1-205ENST00000471049 SDHBP21912 280 aa10.05□□□□□ -0.8
EXOSC1-205ENST00000471049 PTPREP23469 700 aa10.05□□□□□ -0.8
EXOSC1-205ENST00000471049 CDK7P50613 346 aa10.05□□□□□ -0.8
EXOSC1-205ENST00000471049 PDE4BQ07343 736 aa10.05□□□□□ -0.8
EXOSC1-205ENST00000471049 PDE4CQ08493 712 aa10.05□□□□□ -0.8
EXOSC1-205ENST00000471049 CATSPERGQ6ZRH7 1159 aa10.05□□□□□ -0.8
EXOSC1-205ENST00000471049 EP400NLQ6ZTU2 488 aa10.05□□□□□ -0.8
EXOSC1-205ENST00000471049 RPUSD2Q8IZ73 545 aaKnown RBP10.05□□□□□ -0.8
EXOSC1-205ENST00000471049 ZNF444Q8N0Y2 327 aaPredicted RBP10.05□□□□□ -0.8
EXOSC1-205ENST00000471049 NUP133Q8WUM0 1156 aa10.05□□□□□ -0.8
EXOSC1-205ENST00000471049 PABPC5Q96DU9 382 aaKnown RBP10.05□□□□□ -0.8
EXOSC1-205ENST00000471049 FAM227BQ96M60 508 aa10.05□□□□□ -0.8
EXOSC1-205ENST00000471049 PAGR1Q9BTK6 254 aa10.05□□□□□ -0.8
EXOSC1-205ENST00000471049 RPAP3Q9H6T3 665 aaPredicted RBP10.05□□□□□ -0.8
EXOSC1-205ENST00000471049 SUGCTQ9HAC7 445 aa10.05□□□□□ -0.8
EXOSC1-205ENST00000471049 PRDM4Q9UKN5 801 aa10.05□□□□□ -0.8
EXOSC1-205ENST00000471049 HELZ2Q9BYK8 2649 aaKnown RBP10.05□□□□□ -0.8
EXOSC1-205ENST00000471049 STXBP3O00186 592 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms