RNA–Protein interactions for RNA: ENST00000470771.1

ABCA4-204, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 3

Gene ABCA4, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-204ENST00000470771 TIMP1P01033 207 aa16■□□□□ 0.15
ABCA4-204ENST00000470771 SMPD1P17405 629 aa16■□□□□ 0.15
ABCA4-204ENST00000470771 ALDH5A1P51649 535 aaPredicted RBP16■□□□□ 0.15
ABCA4-204ENST00000470771 RPS6P62753 249 aaKnown RBP16■□□□□ 0.15
ABCA4-204ENST00000470771 BEX3Q00994 111 aa16■□□□□ 0.15
ABCA4-204ENST00000470771 USH1GQ495M9 461 aa16■□□□□ 0.15
ABCA4-204ENST00000470771 DUSP28Q4G0W2 176 aa16■□□□□ 0.15
ABCA4-204ENST00000470771 TAPT1Q6NXT6 567 aa16■□□□□ 0.15
ABCA4-204ENST00000470771 FBXO16Q8IX29 292 aaPredicted RBP16■□□□□ 0.15
ABCA4-204ENST00000470771 CLEC4DQ8WXI8 215 aa16■□□□□ 0.15
ABCA4-204ENST00000470771 GPHNQ9NQX3 736 aaPredicted RBP16■□□□□ 0.15
ABCA4-204ENST00000470771 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.99■□□□□ 0.15
ABCA4-204ENST00000470771 ERICH2A1L162 156 aa15.99■□□□□ 0.15
ABCA4-204ENST00000470771 CPT1AP50416 773 aa15.99■□□□□ 0.15
ABCA4-204ENST00000470771 TRAF1Q13077 416 aa15.99■□□□□ 0.15
ABCA4-204ENST00000470771 SART3Q15020 963 aaKnown RBP15.99■□□□□ 0.15
ABCA4-204ENST00000470771 CXCL17Q6UXB2 119 aa15.99■□□□□ 0.15
ABCA4-204ENST00000470771 ADGRF4Q8IZF3 695 aa15.99■□□□□ 0.15
ABCA4-204ENST00000470771 TMEM199Q8N511 208 aa15.99■□□□□ 0.15
ABCA4-204ENST00000470771 PDGFCQ9NRA1 345 aa15.99■□□□□ 0.15
ABCA4-204ENST00000470771 ASTN1O14525 1302 aa15.98■□□□□ 0.15
ABCA4-204ENST00000470771 ABCB11O95342 1321 aa15.98■□□□□ 0.15
ABCA4-204ENST00000470771 GSPT1P15170 499 aaKnown RBP15.98■□□□□ 0.15
ABCA4-204ENST00000470771 CHMLP26374 656 aa15.98■□□□□ 0.15
ABCA4-204ENST00000470771 PDE4AP27815 886 aa15.98■□□□□ 0.15
ABCA4-204ENST00000470771 IRX6P78412 446 aaPredicted RBP15.98■□□□□ 0.15
ABCA4-204ENST00000470771 ITGA7Q13683 1181 aa15.98■□□□□ 0.15
ABCA4-204ENST00000470771 CDC37Q16543 378 aaPredicted RBP15.98■□□□□ 0.15
ABCA4-204ENST00000470771 MFSD5Q6N075 450 aa15.98■□□□□ 0.15
ABCA4-204ENST00000470771 SLC30A10Q6XR72 485 aa15.98■□□□□ 0.15
ABCA4-204ENST00000470771 RALYLQ86SE5 291 aaKnown RBP15.98■□□□□ 0.15
ABCA4-204ENST00000470771 SCFD2Q8WU76 684 aa15.98■□□□□ 0.15
ABCA4-204ENST00000470771 RNPC3Q96LT9 517 aaKnown RBP15.98■□□□□ 0.15
ABCA4-204ENST00000470771 PURBQ96QR8 312 aaKnown RBP15.98■□□□□ 0.15
ABCA4-204ENST00000470771 VAT1LQ9HCJ6 419 aa15.98■□□□□ 0.15
ABCA4-204ENST00000470771 POLR3EQ9NVU0 708 aa15.98■□□□□ 0.15
ABCA4-204ENST00000470771 MTMR10Q9NXD2 777 aa15.98■□□□□ 0.15
ABCA4-204ENST00000470771 STXBP5LQ9Y2K9 1186 aa15.98■□□□□ 0.15
ABCA4-204ENST00000470771 MRPL11Q9Y3B7 192 aaKnown RBP15.98■□□□□ 0.15
ABCA4-204ENST00000470771 NKRFO15226 690 aaKnown RBP eCLIP15.97■□□□□ 0.15
ABCA4-204ENST00000470771 CTAGE5O15320 804 aa15.97■□□□□ 0.15
ABCA4-204ENST00000470771 KPNA6O60684 536 aa15.97■□□□□ 0.15
ABCA4-204ENST00000470771 IRX5P78411 483 aaPredicted RBP15.97■□□□□ 0.15
ABCA4-204ENST00000470771 SMAD3P84022 425 aaKnown RBP15.97■□□□□ 0.15
ABCA4-204ENST00000470771 PPIGQ13427 754 aaKnown RBP eCLIP15.97■□□□□ 0.15
ABCA4-204ENST00000470771 C9orf50Q5SZB4 431 aa15.97■□□□□ 0.15
ABCA4-204ENST00000470771 ZNF697Q5TEC3 545 aa15.97■□□□□ 0.15
ABCA4-204ENST00000470771 Q7L0L9 218 aa15.97■□□□□ 0.15
ABCA4-204ENST00000470771 FBXO11Q86XK2 927 aa15.97■□□□□ 0.15
ABCA4-204ENST00000470771 SLC17A8Q8NDX2 589 aa15.97■□□□□ 0.15
ABCA4-204ENST00000470771 NSUN6Q8TEA1 469 aaKnown RBP15.97■□□□□ 0.15
ABCA4-204ENST00000470771 TBX21Q9UL17 535 aa15.97■□□□□ 0.15
ABCA4-204ENST00000470771 RBM47A0AV96 593 aaKnown RBP15.96■□□□□ 0.15
ABCA4-204ENST00000470771 KLRF2D3W0D1 207 aa15.96■□□□□ 0.15
ABCA4-204ENST00000470771 ITGB8P26012 769 aa15.96■□□□□ 0.15
ABCA4-204ENST00000470771 PPP2R5BQ15173 497 aa15.96■□□□□ 0.15
ABCA4-204ENST00000470771 FAM126BQ8IXS8 530 aa15.96■□□□□ 0.15
ABCA4-204ENST00000470771 SLC43A3Q8NBI5 491 aa15.96■□□□□ 0.15
ABCA4-204ENST00000470771 IWS1Q96ST2 819 aa15.96■□□□□ 0.15
ABCA4-204ENST00000470771 AMNQ9BXJ7 453 aa15.96■□□□□ 0.15
ABCA4-204ENST00000470771 MCM3APO60318 1980 aa15.96■□□□□ 0.15
ABCA4-204ENST00000470771 IFIT3O14879 490 aaKnown RBP15.95■□□□□ 0.14
ABCA4-204ENST00000470771 SUPT20HL2P0C7V6 817 aa15.95■□□□□ 0.14
ABCA4-204ENST00000470771 TTLL4Q14679 1199 aa15.95■□□□□ 0.14
ABCA4-204ENST00000470771 OR6J1Q8NGC5 347 aa15.95■□□□□ 0.14
ABCA4-204ENST00000470771 NCOA7Q8NI08 942 aa15.95■□□□□ 0.14
ABCA4-204ENST00000470771 CPVLQ9H3G5 476 aa15.95■□□□□ 0.14
ABCA4-204ENST00000470771 JMJD4Q9H9V9 463 aa15.95■□□□□ 0.14
ABCA4-204ENST00000470771 DDX49Q9Y6V7 483 aaKnown RBP15.95■□□□□ 0.14
ABCA4-204ENST00000470771 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.94■□□□□ 0.14
ABCA4-204ENST00000470771 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.94■□□□□ 0.14
ABCA4-204ENST00000470771 CD4P01730 458 aa15.94■□□□□ 0.14
ABCA4-204ENST00000470771 TXNP10599 105 aaKnown RBP15.94■□□□□ 0.14
ABCA4-204ENST00000470771 EDNRBP24530 442 aa15.94■□□□□ 0.14
ABCA4-204ENST00000470771 STXBP2Q15833 593 aa15.94■□□□□ 0.14
ABCA4-204ENST00000470771 QRICH1Q2TAL8 776 aa15.94■□□□□ 0.14
ABCA4-204ENST00000470771 ARHGEF16Q5VV41 709 aa15.94■□□□□ 0.14
ABCA4-204ENST00000470771 RMDN3Q96TC7 470 aa15.94■□□□□ 0.14
ABCA4-204ENST00000470771 MTG1Q9BT17 334 aaPredicted RBP15.94■□□□□ 0.14
ABCA4-204ENST00000470771 MTIF3Q9H2K0 278 aaKnown RBP15.94■□□□□ 0.14
ABCA4-204ENST00000470771 HIPK3Q9H422 1215 aa15.94■□□□□ 0.14
ABCA4-204ENST00000470771 MAP3K20Q9NYL2 800 aaKnown RBP15.94■□□□□ 0.14
ABCA4-204ENST00000470771 SGSM2O43147 1006 aa15.93■□□□□ 0.14
ABCA4-204ENST00000470771 MYL3P08590 195 aa15.93■□□□□ 0.14
ABCA4-204ENST00000470771 CYP21A2P08686 494 aa15.93■□□□□ 0.14
ABCA4-204ENST00000470771 EPHB4P54760 987 aa15.93■□□□□ 0.14
ABCA4-204ENST00000470771 PTH1RQ03431 593 aa15.93■□□□□ 0.14
ABCA4-204ENST00000470771 WTAPQ15007 396 aa15.93■□□□□ 0.14
ABCA4-204ENST00000470771 SEC23AQ15436 765 aa15.93■□□□□ 0.14
ABCA4-204ENST00000470771 CATIPQ7Z7H3 387 aa15.93■□□□□ 0.14
ABCA4-204ENST00000470771 RPUSD2Q8IZ73 545 aaKnown RBP15.93■□□□□ 0.14
ABCA4-204ENST00000470771 SAMD3Q8N6K7 520 aa15.93■□□□□ 0.14
ABCA4-204ENST00000470771 SYTL5Q8TDW5 730 aaPredicted RBP15.93■□□□□ 0.14
ABCA4-204ENST00000470771 PPP1R12CQ9BZL4 782 aa15.93■□□□□ 0.14
ABCA4-204ENST00000470771 PCDHA1Q9Y5I3 950 aa15.93■□□□□ 0.14
ABCA4-204ENST00000470771 TMEM265A0A087WTH1 108 aa15.92■□□□□ 0.14
ABCA4-204ENST00000470771 A6NJR5 290 aa15.92■□□□□ 0.14
ABCA4-204ENST00000470771 E7EWF7 191 aa15.92■□□□□ 0.14
ABCA4-204ENST00000470771 ZBTB5O15062 677 aa15.92■□□□□ 0.14
ABCA4-204ENST00000470771 EIF3JO75822 258 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms