RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 MSMPQ1L6U9 139 aa8.87□□□□□ -0.99
PTP4A1-202ENST00000470661 PRAMEF13Q5VWM6 474 aa8.87□□□□□ -0.99
PTP4A1-202ENST00000470661 DIEXFQ68CQ4 756 aaKnown RBP8.87□□□□□ -0.99
PTP4A1-202ENST00000470661 XAGE3Q8WTP9 111 aa8.87□□□□□ -0.99
PTP4A1-202ENST00000470661 CFAP53Q96M91 514 aa8.87□□□□□ -0.99
PTP4A1-202ENST00000470661 FOXQ1Q9C009 403 aa8.87□□□□□ -0.99
PTP4A1-202ENST00000470661 KIAA1522Q9P206 1035 aaPredicted RBP8.87□□□□□ -0.99
PTP4A1-202ENST00000470661 ZC3H7BQ9UGR2 993 aaKnown RBP8.87□□□□□ -0.99
PTP4A1-202ENST00000470661 ADAMTS1Q9UHI8 967 aa8.87□□□□□ -0.99
PTP4A1-202ENST00000470661 TACC3Q9Y6A5 838 aa8.87□□□□□ -0.99
PTP4A1-202ENST00000470661 C4BP0C0L5 1744 aa8.87□□□□□ -0.99
PTP4A1-202ENST00000470661 C5P01031 1676 aa8.87□□□□□ -0.99
PTP4A1-202ENST00000470661 GNAT3A8MTJ3 354 aa8.86□□□□□ -0.99
PTP4A1-202ENST00000470661 GRIN3BO60391 1043 aa8.86□□□□□ -0.99
PTP4A1-202ENST00000470661 SLITRK5O94991 958 aa8.86□□□□□ -0.99
PTP4A1-202ENST00000470661 YBX3P16989 372 aaKnown RBP eCLIP8.86□□□□□ -0.99
PTP4A1-202ENST00000470661 GPR162Q16538 588 aa8.86□□□□□ -0.99
PTP4A1-202ENST00000470661 DTX1Q86Y01 620 aa8.86□□□□□ -0.99
PTP4A1-202ENST00000470661 ZNF296Q8WUU4 475 aaPredicted RBP8.86□□□□□ -0.99
PTP4A1-202ENST00000470661 TJP2Q9UDY2 1190 aa8.86□□□□□ -0.99
PTP4A1-202ENST00000470661 POLR3KQ9Y2Y1 108 aaPredicted RBP8.86□□□□□ -0.99
PTP4A1-202ENST00000470661 MMP10P09238 476 aa8.85□□□□□ -0.99
PTP4A1-202ENST00000470661 YY1P25490 414 aa8.85□□□□□ -0.99
PTP4A1-202ENST00000470661 CANXP27824 592 aaKnown RBP8.85□□□□□ -0.99
PTP4A1-202ENST00000470661 ZNF394Q53GI3 561 aa8.85□□□□□ -0.99
PTP4A1-202ENST00000470661 XP32Q5T750 250 aa8.85□□□□□ -0.99
PTP4A1-202ENST00000470661 CCDC146Q8IYE0 955 aa8.85□□□□□ -0.99
PTP4A1-202ENST00000470661 ZNF496Q96IT1 587 aaPredicted RBP8.85□□□□□ -0.99
PTP4A1-202ENST00000470661 HEXIM2Q96MH2 286 aaKnown RBP8.85□□□□□ -0.99
PTP4A1-202ENST00000470661 MIPEPQ99797 713 aa8.85□□□□□ -0.99
PTP4A1-202ENST00000470661 PODXL2Q9NZ53 605 aa8.85□□□□□ -0.99
PTP4A1-202ENST00000470661 NUDCQ9Y266 331 aa8.85□□□□□ -0.99
PTP4A1-202ENST00000470661 RRP7AQ9Y3A4 280 aaKnown RBP8.85□□□□□ -0.99
PTP4A1-202ENST00000470661 SUPT16HQ9Y5B9 1047 aaKnown RBP8.85□□□□□ -0.99
PTP4A1-202ENST00000470661 PCDHGB7Q9Y5F8 929 aa8.85□□□□□ -0.99
PTP4A1-202ENST00000470661 RBAK-RBAKDNI3L0D1 243 aa8.84□□□□□ -0.99
PTP4A1-202ENST00000470661 RPS6KA4O75676 772 aa8.84□□□□□ -0.99
PTP4A1-202ENST00000470661 A1BGP04217 495 aa8.84□□□□□ -0.99
PTP4A1-202ENST00000470661 CYP19A1P11511 503 aaPredicted RBP8.84□□□□□ -0.99
PTP4A1-202ENST00000470661 PLCG1P19174 1290 aa8.84□□□□□ -0.99
PTP4A1-202ENST00000470661 VAMP1P23763 118 aa8.84□□□□□ -0.99
PTP4A1-202ENST00000470661 RFC4P35249 363 aa8.84□□□□□ -0.99
PTP4A1-202ENST00000470661 CRKP46108 304 aa8.84□□□□□ -0.99
PTP4A1-202ENST00000470661 PDE4BQ07343 736 aa8.84□□□□□ -0.99
PTP4A1-202ENST00000470661 UBR3Q6ZT12 1888 aa8.84□□□□□ -0.99
PTP4A1-202ENST00000470661 PLD6Q8N2A8 252 aaKnown RBP8.84□□□□□ -0.99
PTP4A1-202ENST00000470661 ZNF428Q96B54 188 aa8.84□□□□□ -0.99
PTP4A1-202ENST00000470661 ACSF2Q96CM8 615 aaPredicted RBP8.84□□□□□ -0.99
PTP4A1-202ENST00000470661 TMEM87BQ96K49 555 aa8.84□□□□□ -0.99
PTP4A1-202ENST00000470661 KCNQ5Q9NR82 932 aa8.84□□□□□ -0.99
PTP4A1-202ENST00000470661 ZBTB1Q9Y2K1 713 aa8.84□□□□□ -0.99
PTP4A1-202ENST00000470661 MAP3K5Q99683 1374 aa8.84□□□□□ -0.99
PTP4A1-202ENST00000470661 SCN11AQ9UI33 1791 aa8.84□□□□□ -1
PTP4A1-202ENST00000470661 A0A0G2JLW4 131 aa8.83□□□□□ -1
PTP4A1-202ENST00000470661 EOMESO95936 686 aa8.83□□□□□ -1
PTP4A1-202ENST00000470661 CST3P01034 146 aaPredicted RBP8.83□□□□□ -1
PTP4A1-202ENST00000470661 GYS1P13807 737 aa8.83□□□□□ -1
PTP4A1-202ENST00000470661 ITIH2P19823 946 aa8.83□□□□□ -1
PTP4A1-202ENST00000470661 CAP2P40123 477 aa8.83□□□□□ -1
PTP4A1-202ENST00000470661 TEFQ10587 303 aa8.83□□□□□ -1
PTP4A1-202ENST00000470661 MPP2Q14168 576 aa8.83□□□□□ -1
PTP4A1-202ENST00000470661 CCDC184Q52MB2 194 aa8.83□□□□□ -1
PTP4A1-202ENST00000470661 ARHGAP27Q6ZUM4 889 aa8.83□□□□□ -1
PTP4A1-202ENST00000470661 FAM214BQ7L5A3 538 aa8.83□□□□□ -1
PTP4A1-202ENST00000470661 REC114Q7Z4M0 266 aa8.83□□□□□ -1
PTP4A1-202ENST00000470661 NBPF11Q86T75 865 aa8.83□□□□□ -1
PTP4A1-202ENST00000470661 FLAD1Q8NFF5 587 aa8.83□□□□□ -1
PTP4A1-202ENST00000470661 RNF34Q969K3 372 aa8.83□□□□□ -1
PTP4A1-202ENST00000470661 METTL5Q9NRN9 209 aaKnown RBP8.83□□□□□ -1
PTP4A1-202ENST00000470661 UBP1Q9NZI7 540 aa8.83□□□□□ -1
PTP4A1-202ENST00000470661 BTBD11A6QL63 1104 aa8.82□□□□□ -1
PTP4A1-202ENST00000470661 GREM1O60565 184 aa8.82□□□□□ -1
PTP4A1-202ENST00000470661 DDR1Q08345 913 aa8.82□□□□□ -1
PTP4A1-202ENST00000470661 ZNF790Q6PG37 636 aa8.82□□□□□ -1
PTP4A1-202ENST00000470661 USP48Q86UV5 1035 aa8.82□□□□□ -1
PTP4A1-202ENST00000470661 MRPL41Q8IXM3 137 aaKnown RBP8.82□□□□□ -1
PTP4A1-202ENST00000470661 RIN3Q8TB24 985 aa8.82□□□□□ -1
PTP4A1-202ENST00000470661 PLEKHF1Q96S99 279 aa8.82□□□□□ -1
PTP4A1-202ENST00000470661 ADAM30Q9UKF2 790 aa8.82□□□□□ -1
PTP4A1-202ENST00000470661 USP16Q9Y5T5 823 aa8.82□□□□□ -1
PTP4A1-202ENST00000470661 CNTNAP4Q9C0A0 1308 aa8.81□□□□□ -1
PTP4A1-202ENST00000470661 UPK3BL1B0FP48 263 aa8.81□□□□□ -1
PTP4A1-202ENST00000470661 UPK3BL2E5RIL1 263 aa8.81□□□□□ -1
PTP4A1-202ENST00000470661 SCAMP3O14828 347 aaKnown RBP8.81□□□□□ -1
PTP4A1-202ENST00000470661 HTR3BO95264 441 aa8.81□□□□□ -1
PTP4A1-202ENST00000470661 OXCT1P55809 520 aa8.81□□□□□ -1
PTP4A1-202ENST00000470661 CWF19L2Q2TBE0 894 aaKnown RBP8.81□□□□□ -1
PTP4A1-202ENST00000470661 LETMD1Q6P1Q0 360 aa8.81□□□□□ -1
PTP4A1-202ENST00000470661 TTC5Q8N0Z6 440 aa8.81□□□□□ -1
PTP4A1-202ENST00000470661 MFSD2AQ8NA29 543 aa8.81□□□□□ -1
PTP4A1-202ENST00000470661 BRMS1Q9HCU9 246 aa8.81□□□□□ -1
PTP4A1-202ENST00000470661 BSDC1Q9NW68 430 aaPredicted RBP8.81□□□□□ -1
PTP4A1-202ENST00000470661 REV1Q9UBZ9 1251 aa8.81□□□□□ -1
PTP4A1-202ENST00000470661 VIRMAQ69YN4 1812 aaKnown RBP8.81□□□□□ -1
PTP4A1-202ENST00000470661 KCPQ6ZWJ8 1503 aa8.8□□□□□ -1
PTP4A1-202ENST00000470661 QSER1Q2KHR3 1735 aa8.8□□□□□ -1
PTP4A1-202ENST00000470661 DPEP1P16444 411 aa8.8□□□□□ -1
PTP4A1-202ENST00000470661 C9orf131Q5VYM1 1079 aa8.8□□□□□ -1
PTP4A1-202ENST00000470661 SLC6A19Q695T7 634 aa8.8□□□□□ -1
PTP4A1-202ENST00000470661 KIAA0825Q8IV33 1275 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms