RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 DNERQ8NFT8 737 aa16.43■□□□□ 0.22
TOP3B-215ENST00000470338 CTCFLQ8NI51 663 aaPredicted RBP16.43■□□□□ 0.22
TOP3B-215ENST00000470338 PIGSQ96S52 555 aa16.43■□□□□ 0.22
TOP3B-215ENST00000470338 SENP6Q9GZR1 1112 aaPredicted RBP16.43■□□□□ 0.22
TOP3B-215ENST00000470338 SNX14Q9Y5W7 946 aa16.43■□□□□ 0.22
TOP3B-215ENST00000470338 NR2E3Q9Y5X4 410 aa16.43■□□□□ 0.22
TOP3B-215ENST00000470338 DDX49Q9Y6V7 483 aaKnown RBP16.43■□□□□ 0.22
TOP3B-215ENST00000470338 OPLAHO14841 1288 aa16.42■□□□□ 0.22
TOP3B-215ENST00000470338 PGK1P00558 417 aa16.42■□□□□ 0.22
TOP3B-215ENST00000470338 GHRHRQ02643 423 aa16.42■□□□□ 0.22
TOP3B-215ENST00000470338 TRAF1Q13077 416 aa16.42■□□□□ 0.22
TOP3B-215ENST00000470338 TAPT1Q6NXT6 567 aa16.42■□□□□ 0.22
TOP3B-215ENST00000470338 RNF180Q86T96 592 aa16.42■□□□□ 0.22
TOP3B-215ENST00000470338 LENG1Q96BZ8 264 aaPredicted RBP16.42■□□□□ 0.22
TOP3B-215ENST00000470338 LZTS2Q9BRK4 669 aa16.42■□□□□ 0.22
TOP3B-215ENST00000470338 SPZ1Q9BXG8 430 aa16.42■□□□□ 0.22
TOP3B-215ENST00000470338 VTA1Q9NP79 307 aa16.42■□□□□ 0.22
TOP3B-215ENST00000470338 PCDHA1Q9Y5I3 950 aa16.42■□□□□ 0.22
TOP3B-215ENST00000470338 SLC12A7Q9Y666 1083 aa16.42■□□□□ 0.22
TOP3B-215ENST00000470338 KIAA1217Q5T5P2 1943 aa16.42■□□□□ 0.22
TOP3B-215ENST00000470338 EDNRBP24530 442 aa16.41■□□□□ 0.22
TOP3B-215ENST00000470338 GNAQP50148 359 aa16.41■□□□□ 0.22
TOP3B-215ENST00000470338 LRRC26Q2I0M4 334 aa16.41■□□□□ 0.22
TOP3B-215ENST00000470338 IQSEC1Q6DN90 963 aa16.41■□□□□ 0.22
TOP3B-215ENST00000470338 HOMER1Q86YM7 354 aa16.41■□□□□ 0.22
TOP3B-215ENST00000470338 SAMD3Q8N6K7 520 aa16.41■□□□□ 0.22
TOP3B-215ENST00000470338 FANCBQ8NB91 859 aa16.41■□□□□ 0.22
TOP3B-215ENST00000470338 KLHDC9Q8NEP7 349 aa16.41■□□□□ 0.22
TOP3B-215ENST00000470338 SYTL5Q8TDW5 730 aaPredicted RBP16.41■□□□□ 0.22
TOP3B-215ENST00000470338 TSEN34Q9BSV6 310 aaKnown RBP16.41■□□□□ 0.22
TOP3B-215ENST00000470338 USP26Q9BXU7 913 aa16.41■□□□□ 0.22
TOP3B-215ENST00000470338 UPF3AQ9H1J1 476 aaKnown RBP16.41■□□□□ 0.22
TOP3B-215ENST00000470338 MAP3K20Q9NYL2 800 aaKnown RBP16.41■□□□□ 0.22
TOP3B-215ENST00000470338 PHF24Q9UPV7 400 aa16.41■□□□□ 0.22
TOP3B-215ENST00000470338 SYNRGQ9UMZ2 1314 aa16.41■□□□□ 0.22
TOP3B-215ENST00000470338 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.4■□□□□ 0.22
TOP3B-215ENST00000470338 B4DLN1 442 aa16.4■□□□□ 0.22
TOP3B-215ENST00000470338 ADCYAP1R1P41586 468 aa16.4■□□□□ 0.22
TOP3B-215ENST00000470338 HSD17B4P51659 736 aa16.4■□□□□ 0.22
TOP3B-215ENST00000470338 MRPL12P52815 198 aaKnown RBP16.4■□□□□ 0.22
TOP3B-215ENST00000470338 GJA9P57773 515 aa16.4■□□□□ 0.22
TOP3B-215ENST00000470338 NKX3-2P78367 333 aa16.4■□□□□ 0.22
TOP3B-215ENST00000470338 TNFAIP2Q03169 654 aa16.4■□□□□ 0.22
TOP3B-215ENST00000470338 CCSAPQ6IQ19 270 aaPredicted RBP16.4■□□□□ 0.22
TOP3B-215ENST00000470338 APOA5Q6Q788 366 aa16.4■□□□□ 0.22
TOP3B-215ENST00000470338 FBXO16Q8IX29 292 aaPredicted RBP16.4■□□□□ 0.22
TOP3B-215ENST00000470338 SRBD1Q8N5C6 995 aaKnown RBP16.4■□□□□ 0.22
TOP3B-215ENST00000470338 TCEANC2Q96MN5 208 aa16.4■□□□□ 0.22
TOP3B-215ENST00000470338 TAAR1Q96RJ0 339 aa16.4■□□□□ 0.22
TOP3B-215ENST00000470338 MPHOSPH6Q99547 160 aaKnown RBP16.4■□□□□ 0.22
TOP3B-215ENST00000470338 PDGFCQ9NRA1 345 aa16.4■□□□□ 0.22
TOP3B-215ENST00000470338 COL20A1Q9P218 1284 aa16.4■□□□□ 0.22
TOP3B-215ENST00000470338 GNEQ9Y223 722 aaKnown RBP16.4■□□□□ 0.22
TOP3B-215ENST00000470338 RBM47A0AV96 593 aaKnown RBP16.39■□□□□ 0.21
TOP3B-215ENST00000470338 PLEKHA8P1O95397 391 aa16.39■□□□□ 0.21
TOP3B-215ENST00000470338 MYCNP04198 464 aaPredicted RBP16.39■□□□□ 0.21
TOP3B-215ENST00000470338 RXRAP19793 462 aa16.39■□□□□ 0.21
TOP3B-215ENST00000470338 CST5P28325 142 aaPredicted RBP16.39■□□□□ 0.21
TOP3B-215ENST00000470338 SLC39A5Q6ZMH5 540 aa16.39■□□□□ 0.21
TOP3B-215ENST00000470338 SYNE3Q6ZMZ3 975 aa16.39■□□□□ 0.21
TOP3B-215ENST00000470338 EEPD1Q7L9B9 569 aa16.39■□□□□ 0.21
TOP3B-215ENST00000470338 FBXL16Q8N461 479 aa16.39■□□□□ 0.21
TOP3B-215ENST00000470338 JAKMIP1Q96N16 626 aaKnown RBP16.39■□□□□ 0.21
TOP3B-215ENST00000470338 BRPF3Q9ULD4 1205 aa16.39■□□□□ 0.21
TOP3B-215ENST00000470338 CTAGE5O15320 804 aa16.38■□□□□ 0.21
TOP3B-215ENST00000470338 CFBP00751 764 aa16.38■□□□□ 0.21
TOP3B-215ENST00000470338 CPA1P15085 419 aa16.38■□□□□ 0.21
TOP3B-215ENST00000470338 SMPD1P17405 629 aa16.38■□□□□ 0.21
TOP3B-215ENST00000470338 PDE4DQ08499 809 aa16.38■□□□□ 0.21
TOP3B-215ENST00000470338 SNX17Q15036 470 aa16.38■□□□□ 0.21
TOP3B-215ENST00000470338 C1orf53Q5VUE5 145 aa16.38■□□□□ 0.21
TOP3B-215ENST00000470338 RAB11FIP4Q86YS3 637 aa16.38■□□□□ 0.21
TOP3B-215ENST00000470338 C7orf61Q8IZ16 206 aa16.38■□□□□ 0.21
TOP3B-215ENST00000470338 NSUN6Q8TEA1 469 aaKnown RBP16.38■□□□□ 0.21
TOP3B-215ENST00000470338 RRP36Q96EU6 259 aaKnown RBP16.38■□□□□ 0.21
TOP3B-215ENST00000470338 IWS1Q96ST2 819 aa16.38■□□□□ 0.21
TOP3B-215ENST00000470338 SPC25Q9HBM1 224 aa16.38■□□□□ 0.21
TOP3B-215ENST00000470338 Q9Y3F1 56 aa16.38■□□□□ 0.21
TOP3B-215ENST00000470338 MYADML2A6NDP7 307 aa16.37■□□□□ 0.21
TOP3B-215ENST00000470338 MOXD2PA6NHM9 499 aa16.37■□□□□ 0.21
TOP3B-215ENST00000470338 C6orf222P0C671 652 aaPredicted RBP16.37■□□□□ 0.21
TOP3B-215ENST00000470338 PSMA5P28066 241 aa16.37■□□□□ 0.21
TOP3B-215ENST00000470338 ACLYP53396 1101 aa16.37■□□□□ 0.21
TOP3B-215ENST00000470338 RCAN1P53805 252 aa16.37■□□□□ 0.21
TOP3B-215ENST00000470338 ATN1P54259 1190 aaPredicted RBP16.37■□□□□ 0.21
TOP3B-215ENST00000470338 IRX5P78411 483 aaPredicted RBP16.37■□□□□ 0.21
TOP3B-215ENST00000470338 KCNA10Q16322 511 aa16.37■□□□□ 0.21
TOP3B-215ENST00000470338 DUSP28Q4G0W2 176 aa16.37■□□□□ 0.21
TOP3B-215ENST00000470338 TMEM63BQ5T3F8 832 aa16.37■□□□□ 0.21
TOP3B-215ENST00000470338 BLOC1S2Q6QNY1 142 aa16.37■□□□□ 0.21
TOP3B-215ENST00000470338 TMTC3Q6ZXV5 915 aa16.37■□□□□ 0.21
TOP3B-215ENST00000470338 MICU3Q86XE3 530 aa16.37■□□□□ 0.21
TOP3B-215ENST00000470338 CMTR1Q8N1G2 835 aaKnown RBP16.37■□□□□ 0.21
TOP3B-215ENST00000470338 PIBF1Q8WXW3 757 aa16.37■□□□□ 0.21
TOP3B-215ENST00000470338 FERMT2Q96AC1 680 aa16.37■□□□□ 0.21
TOP3B-215ENST00000470338 RMDN3Q96TC7 470 aa16.37■□□□□ 0.21
TOP3B-215ENST00000470338 AGXT2Q9BYV1 514 aa16.37■□□□□ 0.21
TOP3B-215ENST00000470338 A0A1W2PQ45 241 aaPredicted RBP16.36■□□□□ 0.21
TOP3B-215ENST00000470338 A0A1W2PQY0 241 aa16.36■□□□□ 0.21
TOP3B-215ENST00000470338 ZBTB43O43298 467 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms