RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 ALPK1Q96QP1 1244 aa5.95□□□□□ -1.46
VPS8-220ENST00000469713 ADAMTS10Q9H324 1103 aa5.95□□□□□ -1.46
VPS8-220ENST00000469713 TRIM39Q9HCM9 518 aa5.95□□□□□ -1.46
VPS8-220ENST00000469713 PAK6Q9NQU5 681 aaPredicted RBP5.95□□□□□ -1.46
VPS8-220ENST00000469713 PLAAQ9Y263 795 aa5.95□□□□□ -1.46
VPS8-220ENST00000469713 NPFFR2Q9Y5X5 522 aa5.95□□□□□ -1.46
VPS8-220ENST00000469713 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.94□□□□□ -1.46
VPS8-220ENST00000469713 MSCO60682 206 aa5.94□□□□□ -1.46
VPS8-220ENST00000469713 ADAMTS4O75173 837 aa5.94□□□□□ -1.46
VPS8-220ENST00000469713 TBC1D8O95759 1140 aa5.94□□□□□ -1.46
VPS8-220ENST00000469713 ZGLP1P0C6A0 271 aa5.94□□□□□ -1.46
VPS8-220ENST00000469713 LTBRP36941 435 aa5.94□□□□□ -1.46
VPS8-220ENST00000469713 TAF7LQ5H9L4 462 aa5.94□□□□□ -1.46
VPS8-220ENST00000469713 LCE3BQ5TA77 95 aa5.94□□□□□ -1.46
VPS8-220ENST00000469713 MAMDC2Q7Z304 686 aaPredicted RBP5.94□□□□□ -1.46
VPS8-220ENST00000469713 FGD2Q7Z6J4 655 aa5.94□□□□□ -1.46
VPS8-220ENST00000469713 LINC01599Q8WXQ3 324 aa5.94□□□□□ -1.46
VPS8-220ENST00000469713 SYTL4Q96C24 671 aaPredicted RBP5.94□□□□□ -1.46
VPS8-220ENST00000469713 MFSD3Q96ES6 412 aa5.94□□□□□ -1.46
VPS8-220ENST00000469713 MAP6Q96JE9 813 aa5.94□□□□□ -1.46
VPS8-220ENST00000469713 HHIPL1Q96JK4 782 aa5.94□□□□□ -1.46
VPS8-220ENST00000469713 MMP19Q99542 508 aa5.94□□□□□ -1.46
VPS8-220ENST00000469713 ANGEL1Q9UNK9 670 aaKnown RBP5.94□□□□□ -1.46
VPS8-220ENST00000469713 TRBV23OR9-2A0A075B6M9 112 aa5.93□□□□□ -1.46
VPS8-220ENST00000469713 FADS2P1A8MWK0 482 aa5.93□□□□□ -1.46
VPS8-220ENST00000469713 KCNQ2O43526 872 aa5.93□□□□□ -1.46
VPS8-220ENST00000469713 EFCAB14O75071 495 aa5.93□□□□□ -1.46
VPS8-220ENST00000469713 USP2O75604 605 aaPredicted RBP5.93□□□□□ -1.46
VPS8-220ENST00000469713 DNAJC8O75937 253 aaPredicted RBP5.93□□□□□ -1.46
VPS8-220ENST00000469713 RASGRP1O95267 797 aa5.93□□□□□ -1.46
VPS8-220ENST00000469713 FUT4P22083 530 aa5.93□□□□□ -1.46
VPS8-220ENST00000469713 MASP1P48740 699 aa5.93□□□□□ -1.46
VPS8-220ENST00000469713 TM4SF20Q53R12 229 aa5.93□□□□□ -1.46
VPS8-220ENST00000469713 RNF187Q5TA31 235 aaPredicted RBP5.93□□□□□ -1.46
VPS8-220ENST00000469713 IQCEQ6IPM2 695 aa5.93□□□□□ -1.46
VPS8-220ENST00000469713 FILIP1Q7Z7B0 1213 aa5.93□□□□□ -1.46
VPS8-220ENST00000469713 RCBTB1Q8NDN9 531 aa5.93□□□□□ -1.46
VPS8-220ENST00000469713 SCLYQ96I15 445 aa5.93□□□□□ -1.46
VPS8-220ENST00000469713 GPR27Q9NS67 375 aa5.93□□□□□ -1.46
VPS8-220ENST00000469713 PCMTD2Q9NV79 361 aa5.93□□□□□ -1.46
VPS8-220ENST00000469713 TNFRSF10DQ9UBN6 386 aa5.93□□□□□ -1.46
VPS8-220ENST00000469713 TMEM59LQ9UK28 342 aa5.93□□□□□ -1.46
VPS8-220ENST00000469713 PRKAB1Q9Y478 270 aa5.93□□□□□ -1.46
VPS8-220ENST00000469713 C7orf72A4D263 438 aa5.92□□□□□ -1.46
VPS8-220ENST00000469713 AQP7O14520 342 aa5.92□□□□□ -1.46
VPS8-220ENST00000469713 CRTAMO95727 393 aa5.92□□□□□ -1.46
VPS8-220ENST00000469713 HK2P52789 917 aa5.92□□□□□ -1.46
VPS8-220ENST00000469713 GPR85P60893 370 aa5.92□□□□□ -1.46
VPS8-220ENST00000469713 DUSP4Q13115 394 aa5.92□□□□□ -1.46
VPS8-220ENST00000469713 HLA-DQA1Q5Y7H0 255 aa5.92□□□□□ -1.46
VPS8-220ENST00000469713 RSPO2Q6UXX9 243 aaPredicted RBP5.92□□□□□ -1.46
VPS8-220ENST00000469713 SLCO6A1Q86UG4 719 aa5.92□□□□□ -1.46
VPS8-220ENST00000469713 IFNL3Q8IZI9 196 aa5.92□□□□□ -1.46
VPS8-220ENST00000469713 JMJD8Q96S16 334 aa5.92□□□□□ -1.46
VPS8-220ENST00000469713 ZFP64Q9NPA5 681 aa5.92□□□□□ -1.46
VPS8-220ENST00000469713 IFT57Q9NWB7 429 aa5.92□□□□□ -1.46
VPS8-220ENST00000469713 FBXL7Q9UJT9 491 aa5.92□□□□□ -1.46
VPS8-220ENST00000469713 ADAMTS6Q9UKP5 1117 aa5.92□□□□□ -1.46
VPS8-220ENST00000469713 PCDHA9Q9Y5H5 950 aa5.92□□□□□ -1.46
VPS8-220ENST00000469713 DNAJC6O75061 913 aa5.91□□□□□ -1.46
VPS8-220ENST00000469713 MYCLP1P12525 358 aaPredicted RBP5.91□□□□□ -1.46
VPS8-220ENST00000469713 GUCY1A3Q02108 690 aa5.91□□□□□ -1.46
VPS8-220ENST00000469713 PLCL1Q15111 1095 aa5.91□□□□□ -1.46
VPS8-220ENST00000469713 SLC23A3Q6PIS1 610 aa5.91□□□□□ -1.46
VPS8-220ENST00000469713 CEP128Q6ZU80 1094 aa5.91□□□□□ -1.46
VPS8-220ENST00000469713 MTDHQ86UE4 582 aaKnown RBP5.91□□□□□ -1.46
VPS8-220ENST00000469713 JAMLQ86YT9 394 aa5.91□□□□□ -1.46
VPS8-220ENST00000469713 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.91□□□□□ -1.46
VPS8-220ENST00000469713 PI4K2BQ8TCG2 481 aa5.91□□□□□ -1.46
VPS8-220ENST00000469713 MAGEB10Q96LZ2 347 aaPredicted RBP5.91□□□□□ -1.46
VPS8-220ENST00000469713 ZFYVE21Q9BQ24 234 aa5.91□□□□□ -1.46
VPS8-220ENST00000469713 SPC25Q9HBM1 224 aa5.91□□□□□ -1.46
VPS8-220ENST00000469713 MAGEC2Q9UBF1 373 aaPredicted RBP5.91□□□□□ -1.46
VPS8-220ENST00000469713 PCDHA8Q9Y5H6 950 aa5.91□□□□□ -1.46
VPS8-220ENST00000469713 PCDHA2Q9Y5H9 948 aa5.91□□□□□ -1.46
VPS8-220ENST00000469713 TNPO3Q9Y5L0 923 aaKnown RBP5.91□□□□□ -1.46
VPS8-220ENST00000469713 A0A087X0B3 334 aa5.9□□□□□ -1.46
VPS8-220ENST00000469713 SCO2A0A1W2PP80 73 aa5.9□□□□□ -1.46
VPS8-220ENST00000469713 TCRBV16S1A1N1A0A5B0 115 aa5.9□□□□□ -1.46
VPS8-220ENST00000469713 NPHS1O60500 1241 aa5.9□□□□□ -1.46
VPS8-220ENST00000469713 WNT11O96014 354 aa5.9□□□□□ -1.46
VPS8-220ENST00000469713 NCLP19338 710 aaKnown RBP5.9□□□□□ -1.46
VPS8-220ENST00000469713 KIR2DL1P43626 348 aaPredicted RBP5.9□□□□□ -1.46
VPS8-220ENST00000469713 KIR2DL2P43627 348 aaPredicted RBP5.9□□□□□ -1.46
VPS8-220ENST00000469713 ZNF460Q14592 562 aa5.9□□□□□ -1.46
VPS8-220ENST00000469713 CNNM4Q6P4Q7 775 aa5.9□□□□□ -1.46
VPS8-220ENST00000469713 LBX2Q6XYB7 198 aa5.9□□□□□ -1.46
VPS8-220ENST00000469713 TP53INP2Q8IXH6 220 aa5.9□□□□□ -1.46
VPS8-220ENST00000469713 DPF3Q92784 378 aa5.9□□□□□ -1.46
VPS8-220ENST00000469713 GPATCH3Q96I76 525 aa5.9□□□□□ -1.46
VPS8-220ENST00000469713 TARS2Q9BW92 718 aaKnown RBP5.9□□□□□ -1.46
VPS8-220ENST00000469713 MBNL3Q9NUK0 354 aaKnown RBP5.9□□□□□ -1.46
VPS8-220ENST00000469713 C19orf73Q9NVV2 129 aa5.9□□□□□ -1.46
VPS8-220ENST00000469713 BTG4Q9NY30 223 aa5.9□□□□□ -1.46
VPS8-220ENST00000469713 PPARGC1AQ9UBK2 798 aaKnown RBP5.9□□□□□ -1.46
VPS8-220ENST00000469713 GULP1Q9UBP9 304 aa5.9□□□□□ -1.46
VPS8-220ENST00000469713 TIMM13Q9Y5L4 95 aaPredicted RBP5.9□□□□□ -1.46
VPS8-220ENST00000469713 A0A1W2PQ45 241 aaPredicted RBP5.89□□□□□ -1.47
VPS8-220ENST00000469713 A0A1W2PQY0 241 aa5.89□□□□□ -1.47
VPS8-220ENST00000469713 MYO1BO43795 1136 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms