RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 TEX35Q5T0J7 233 aa16.45■□□□□ 0.22
CBWD3-205ENST00000469687 ZFPM1Q8IX07 1006 aa16.45■□□□□ 0.22
CBWD3-205ENST00000469687 ADGRF4Q8IZF3 695 aa16.45■□□□□ 0.22
CBWD3-205ENST00000469687 NUDT12Q9BQG2 462 aa16.45■□□□□ 0.22
CBWD3-205ENST00000469687 BLOC1S4Q9NUP1 217 aa16.45■□□□□ 0.22
CBWD3-205ENST00000469687 PCDHAC2Q9Y5I4 1007 aa16.45■□□□□ 0.22
CBWD3-205ENST00000469687 FHOD1Q9Y613 1164 aa16.45■□□□□ 0.22
CBWD3-205ENST00000469687 COL11A2P13942 1736 aaPredicted RBP16.45■□□□□ 0.22
CBWD3-205ENST00000469687 KIF5CO60282 957 aa16.45■□□□□ 0.22
CBWD3-205ENST00000469687 SEC31AO94979 1220 aaKnown RBP16.45■□□□□ 0.22
CBWD3-205ENST00000469687 TTLL1O95922 423 aa16.45■□□□□ 0.22
CBWD3-205ENST00000469687 EEF1GP26641 437 aaKnown RBP16.45■□□□□ 0.22
CBWD3-205ENST00000469687 ARHGAP25P42331 645 aa16.45■□□□□ 0.22
CBWD3-205ENST00000469687 ATP2B2Q01814 1243 aa16.45■□□□□ 0.22
CBWD3-205ENST00000469687 ZNF543Q08ER8 600 aa16.45■□□□□ 0.22
CBWD3-205ENST00000469687 TRIM14Q14142 442 aa16.45■□□□□ 0.22
CBWD3-205ENST00000469687 CDC42EP5Q6NZY7 148 aa16.45■□□□□ 0.22
CBWD3-205ENST00000469687 CYP26C1Q6V0L0 522 aa16.45■□□□□ 0.22
CBWD3-205ENST00000469687 KCTD1Q719H9 257 aa16.45■□□□□ 0.22
CBWD3-205ENST00000469687 RSRC2Q7L4I2 434 aaKnown RBP16.45■□□□□ 0.22
CBWD3-205ENST00000469687 SLC35F6Q8N357 371 aa16.45■□□□□ 0.22
CBWD3-205ENST00000469687 P2RX5Q93086 422 aa16.45■□□□□ 0.22
CBWD3-205ENST00000469687 DHTKD1Q96HY7 919 aaPredicted RBP16.45■□□□□ 0.22
CBWD3-205ENST00000469687 PNMA5Q96PV4 448 aa16.45■□□□□ 0.22
CBWD3-205ENST00000469687 QTRT2Q9H974 415 aaKnown RBP16.45■□□□□ 0.22
CBWD3-205ENST00000469687 MAGEF1Q9HAY2 307 aa16.45■□□□□ 0.22
CBWD3-205ENST00000469687 REXO2Q9Y3B8 237 aaKnown RBP16.45■□□□□ 0.22
CBWD3-205ENST00000469687 NRXN2Q9P2S2 1712 aa16.45■□□□□ 0.22
CBWD3-205ENST00000469687 DMTNQ08495 405 aa16.44■□□□□ 0.22
CBWD3-205ENST00000469687 MCM6Q14566 821 aa16.44■□□□□ 0.22
CBWD3-205ENST00000469687 APOBEC3HQ6NTF7 200 aaKnown RBP16.44■□□□□ 0.22
CBWD3-205ENST00000469687 KRT222Q8N1A0 295 aa16.44■□□□□ 0.22
CBWD3-205ENST00000469687 TUBGCP2Q9BSJ2 902 aa16.44■□□□□ 0.22
CBWD3-205ENST00000469687 GREB1LQ9C091 1923 aaPredicted RBP16.44■□□□□ 0.22
CBWD3-205ENST00000469687 SLC39A2Q9NP94 309 aa16.44■□□□□ 0.22
CBWD3-205ENST00000469687 TRIM10Q9UDY6 481 aa16.44■□□□□ 0.22
CBWD3-205ENST00000469687 MYMKA6NI61 221 aa16.44■□□□□ 0.22
CBWD3-205ENST00000469687 RASSF10A6NK89 507 aa16.44■□□□□ 0.22
CBWD3-205ENST00000469687 FAM196BA6NMK8 535 aa16.44■□□□□ 0.22
CBWD3-205ENST00000469687 MPHOSPH10O00566 681 aaKnown RBP16.44■□□□□ 0.22
CBWD3-205ENST00000469687 CCNE1P24864 410 aa16.44■□□□□ 0.22
CBWD3-205ENST00000469687 TNNI2P48788 182 aa16.44■□□□□ 0.22
CBWD3-205ENST00000469687 CACNB3P54284 484 aa16.44■□□□□ 0.22
CBWD3-205ENST00000469687 DYMQ7RTS9 669 aa16.44■□□□□ 0.22
CBWD3-205ENST00000469687 CALML4Q96GE6 196 aa16.44■□□□□ 0.22
CBWD3-205ENST00000469687 UIMC1Q96RL1 719 aa16.44■□□□□ 0.22
CBWD3-205ENST00000469687 MAGEC2Q9UBF1 373 aaPredicted RBP16.44■□□□□ 0.22
CBWD3-205ENST00000469687 LRWD1Q9UFC0 647 aa16.44■□□□□ 0.22
CBWD3-205ENST00000469687 TFR2Q9UP52 801 aa16.44■□□□□ 0.22
CBWD3-205ENST00000469687 ARFGEF1Q9Y6D6 1849 aa16.43■□□□□ 0.22
CBWD3-205ENST00000469687 USP17L10C9JJH3 530 aa16.43■□□□□ 0.22
CBWD3-205ENST00000469687 WDR59Q6PJI9 974 aa16.43■□□□□ 0.22
CBWD3-205ENST00000469687 CNOT6LQ96LI5 555 aaKnown RBP16.43■□□□□ 0.22
CBWD3-205ENST00000469687 SEMA6BQ9H3T3 888 aa16.43■□□□□ 0.22
CBWD3-205ENST00000469687 AGPAT5Q9NUQ2 364 aa16.43■□□□□ 0.22
CBWD3-205ENST00000469687 SIPA1L1O43166 1804 aa16.43■□□□□ 0.22
CBWD3-205ENST00000469687 A0A1W2PQC6 194 aa16.43■□□□□ 0.22
CBWD3-205ENST00000469687 hCG_1984214I3L0E3 225 aa16.43■□□□□ 0.22
CBWD3-205ENST00000469687 ZRANB2O95218 330 aaKnown RBP eCLIP16.43■□□□□ 0.22
CBWD3-205ENST00000469687 TMC4Q7Z404 712 aa16.43■□□□□ 0.22
CBWD3-205ENST00000469687 KCNK18Q7Z418 384 aa16.43■□□□□ 0.22
CBWD3-205ENST00000469687 ZNF713Q8N859 430 aaPredicted RBP16.43■□□□□ 0.22
CBWD3-205ENST00000469687 DNAJC18Q9H819 358 aa16.43■□□□□ 0.22
CBWD3-205ENST00000469687 DBNDD1Q9H9R9 158 aa16.43■□□□□ 0.22
CBWD3-205ENST00000469687 PUF60Q9UHX1 559 aaKnown RBP16.43■□□□□ 0.22
CBWD3-205ENST00000469687 NDUFA10O95299 355 aa16.42■□□□□ 0.22
CBWD3-205ENST00000469687 PNMA6AP0CW24 399 aaPredicted RBP16.42■□□□□ 0.22
CBWD3-205ENST00000469687 FXR2P51116 673 aaKnown RBP eCLIP16.42■□□□□ 0.22
CBWD3-205ENST00000469687 ECM1Q16610 540 aa16.42■□□□□ 0.22
CBWD3-205ENST00000469687 CCDC96Q2M329 555 aa16.42■□□□□ 0.22
CBWD3-205ENST00000469687 KRT27Q7Z3Y8 459 aa16.42■□□□□ 0.22
CBWD3-205ENST00000469687 COL23A1Q86Y22 540 aaPredicted RBP16.42■□□□□ 0.22
CBWD3-205ENST00000469687 OR8K1Q8NGG5 319 aa16.42■□□□□ 0.22
CBWD3-205ENST00000469687 DNAJC7Q99615 494 aa16.42■□□□□ 0.22
CBWD3-205ENST00000469687 SUGT1Q9Y2Z0 365 aa16.42■□□□□ 0.22
CBWD3-205ENST00000469687 LUC7L2Q9Y383 392 aaKnown RBP16.42■□□□□ 0.22
CBWD3-205ENST00000469687 EPN1Q9Y6I3 576 aaPredicted RBP16.42■□□□□ 0.22
CBWD3-205ENST00000469687 PNMA6FA0A0J9YX94 578 aa16.41■□□□□ 0.22
CBWD3-205ENST00000469687 DNM2P50570 870 aa16.41■□□□□ 0.22
CBWD3-205ENST00000469687 TCP10Q12799 353 aa16.41■□□□□ 0.22
CBWD3-205ENST00000469687 MIIPQ5JXC2 388 aa16.41■□□□□ 0.22
CBWD3-205ENST00000469687 SV2BQ7L1I2 683 aa16.41■□□□□ 0.22
CBWD3-205ENST00000469687 LARP4BQ92615 738 aaKnown RBP16.41■□□□□ 0.22
CBWD3-205ENST00000469687 TTYH3Q9C0H2 523 aa16.41■□□□□ 0.22
CBWD3-205ENST00000469687 RIC8AQ9NPQ8 531 aa16.41■□□□□ 0.22
CBWD3-205ENST00000469687 PRDM4Q9UKN5 801 aa16.41■□□□□ 0.22
CBWD3-205ENST00000469687 CAPN11Q9UMQ6 739 aa16.41■□□□□ 0.22
CBWD3-205ENST00000469687 SCN9AQ15858 1988 aa16.41■□□□□ 0.22
CBWD3-205ENST00000469687 RAD21O60216 631 aa16.41■□□□□ 0.22
CBWD3-205ENST00000469687 CLK2P49760 499 aaKnown RBP16.41■□□□□ 0.22
CBWD3-205ENST00000469687 AMPD3Q01432 767 aa16.41■□□□□ 0.22
CBWD3-205ENST00000469687 ORC2Q13416 577 aaPredicted RBP16.41■□□□□ 0.22
CBWD3-205ENST00000469687 KIF4BQ2VIQ3 1234 aa16.41■□□□□ 0.22
CBWD3-205ENST00000469687 TMCO3Q6UWJ1 677 aa16.41■□□□□ 0.22
CBWD3-205ENST00000469687 GLIS3Q8NEA6 775 aa16.41■□□□□ 0.22
CBWD3-205ENST00000469687 SNX29Q8TEQ0 813 aa16.41■□□□□ 0.22
CBWD3-205ENST00000469687 CCDC47Q96A33 483 aaKnown RBP16.41■□□□□ 0.22
CBWD3-205ENST00000469687 PARD6BQ9BYG5 372 aa16.41■□□□□ 0.22
CBWD3-205ENST00000469687 SWAP70Q9UH65 585 aa16.41■□□□□ 0.22
CBWD3-205ENST00000469687 CDC23Q9UJX2 597 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms