RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 BIN2Q9UBW5 565 aaPredicted RBP13.48□□□□□ -0.25
VARS2-205ENST00000469358 BUB1O43683 1085 aa13.48□□□□□ -0.25
VARS2-205ENST00000469358 CYLC1P35663 651 aaPredicted RBP13.48□□□□□ -0.25
VARS2-205ENST00000469358 TXKP42681 527 aa13.48□□□□□ -0.25
VARS2-205ENST00000469358 KIF5AQ12840 1032 aa13.48□□□□□ -0.25
VARS2-205ENST00000469358 TBC1D9BQ66K14 1250 aa13.48□□□□□ -0.25
VARS2-205ENST00000469358 CERS3Q8IU89 383 aa13.48□□□□□ -0.25
VARS2-205ENST00000469358 TGFBRAP1Q8WUH2 860 aa13.48□□□□□ -0.25
VARS2-205ENST00000469358 SMARCC1Q92922 1105 aaPredicted RBP13.48□□□□□ -0.25
VARS2-205ENST00000469358 SECISBP2LQ93073 1101 aaKnown RBP13.48□□□□□ -0.25
VARS2-205ENST00000469358 MS4A14Q96JA4 679 aa13.48□□□□□ -0.25
VARS2-205ENST00000469358 CRACR2AQ9BSW2 395 aa13.48□□□□□ -0.25
VARS2-205ENST00000469358 UBA5Q9GZZ9 404 aa13.48□□□□□ -0.25
VARS2-205ENST00000469358 SRP68Q9UHB9 627 aaKnown RBP13.48□□□□□ -0.25
VARS2-205ENST00000469358 FAM170AA1A519 330 aa13.47□□□□□ -0.25
VARS2-205ENST00000469358 EIF3CLB5ME19 914 aaKnown RBP13.47□□□□□ -0.25
VARS2-205ENST00000469358 TSPY3P0CV98 308 aa13.47□□□□□ -0.25
VARS2-205ENST00000469358 TSPY8P0CW00 308 aa13.47□□□□□ -0.25
VARS2-205ENST00000469358 RNASE9P60153 205 aaKnown RBP13.47□□□□□ -0.25
VARS2-205ENST00000469358 PTF1AQ7RTS3 328 aa13.47□□□□□ -0.25
VARS2-205ENST00000469358 CREG2Q8IUH2 290 aa13.47□□□□□ -0.25
VARS2-205ENST00000469358 MARCH10Q8NA82 808 aaPredicted RBP13.47□□□□□ -0.25
VARS2-205ENST00000469358 EIF3CQ99613 913 aaKnown RBP13.47□□□□□ -0.25
VARS2-205ENST00000469358 EIF4A3P38919 411 aaKnown RBP13.47□□□□□ -0.25
VARS2-205ENST00000469358 NAPAP54920 295 aa13.47□□□□□ -0.25
VARS2-205ENST00000469358 ZBED6P86452 979 aa13.47□□□□□ -0.25
VARS2-205ENST00000469358 POTEDQ86YR6 584 aa13.47□□□□□ -0.25
VARS2-205ENST00000469358 IFIH1Q9BYX4 1025 aaKnown RBP13.47□□□□□ -0.25
VARS2-205ENST00000469358 MED4Q9NPJ6 270 aa13.47□□□□□ -0.25
VARS2-205ENST00000469358 MYH14Q7Z406 1995 aaKnown RBP13.47□□□□□ -0.25
VARS2-205ENST00000469358 ZSCAN5CA6NGD5 496 aaPredicted RBP13.46□□□□□ -0.25
VARS2-205ENST00000469358 NUTM2BA6NNL0 878 aaPredicted RBP13.46□□□□□ -0.25
VARS2-205ENST00000469358 NUTM2EB1AL46 878 aaPredicted RBP13.46□□□□□ -0.25
VARS2-205ENST00000469358 CCNE1P24864 410 aa13.46□□□□□ -0.25
VARS2-205ENST00000469358 KCNB1Q14721 858 aa13.46□□□□□ -0.25
VARS2-205ENST00000469358 GOLGA6L1Q8N7Z2 621 aa13.46□□□□□ -0.25
VARS2-205ENST00000469358 TMEM47Q9BQJ4 181 aa13.46□□□□□ -0.25
VARS2-205ENST00000469358 MMTAG2Q9BU76 263 aaKnown RBP13.46□□□□□ -0.25
VARS2-205ENST00000469358 ESYT3A0FGR9 886 aa13.46□□□□□ -0.25
VARS2-205ENST00000469358 PTPROQ16827 1216 aa13.46□□□□□ -0.25
VARS2-205ENST00000469358 RRAGAQ7L523 313 aa13.46□□□□□ -0.25
VARS2-205ENST00000469358 NUDT12Q9BQG2 462 aa13.46□□□□□ -0.25
VARS2-205ENST00000469358 KLRF2D3W0D1 207 aa13.46□□□□□ -0.26
VARS2-205ENST00000469358 RPS8P62241 208 aaKnown RBP13.46□□□□□ -0.26
VARS2-205ENST00000469358 GFPT1Q06210 699 aaPredicted RBP13.46□□□□□ -0.26
VARS2-205ENST00000469358 C12orf60Q5U649 245 aa13.46□□□□□ -0.26
VARS2-205ENST00000469358 PACS2Q86VP3 889 aa13.46□□□□□ -0.26
VARS2-205ENST00000469358 DNAAF5Q86Y56 855 aa13.46□□□□□ -0.26
VARS2-205ENST00000469358 PYM1Q9BRP8 204 aaKnown RBP13.46□□□□□ -0.26
VARS2-205ENST00000469358 NLRC4Q9NPP4 1024 aa13.46□□□□□ -0.26
VARS2-205ENST00000469358 ATP8A2Q9NTI2 1148 aa13.46□□□□□ -0.26
VARS2-205ENST00000469358 TCP11L1Q9NUJ3 509 aa13.46□□□□□ -0.26
VARS2-205ENST00000469358 ARPP21Q9UBL0 812 aaPredicted RBP13.46□□□□□ -0.26
VARS2-205ENST00000469358 PCDHA13Q9Y5I0 950 aa13.46□□□□□ -0.26
VARS2-205ENST00000469358 VAV2P52735 878 aa13.45□□□□□ -0.26
VARS2-205ENST00000469358 SPA17Q15506 151 aa13.45□□□□□ -0.26
VARS2-205ENST00000469358 DDB1Q16531 1140 aa13.45□□□□□ -0.26
VARS2-205ENST00000469358 TSEN2Q8NCE0 465 aaKnown RBP13.45□□□□□ -0.26
VARS2-205ENST00000469358 CCSER1Q9C0I3 900 aa13.45□□□□□ -0.26
VARS2-205ENST00000469358 ACBD3Q9H3P7 528 aa13.45□□□□□ -0.26
VARS2-205ENST00000469358 DEF6Q9H4E7 631 aa13.45□□□□□ -0.26
VARS2-205ENST00000469358 BARHL2Q9NY43 387 aa13.45□□□□□ -0.26
VARS2-205ENST00000469358 GOLGA6BA6NDN3 693 aa13.45□□□□□ -0.26
VARS2-205ENST00000469358 SMCO2A6NFE2 343 aa13.45□□□□□ -0.26
VARS2-205ENST00000469358 LRRC53A6NM62 1247 aa13.45□□□□□ -0.26
VARS2-205ENST00000469358 IVLP07476 585 aa13.45□□□□□ -0.26
VARS2-205ENST00000469358 OR52Z1P0C646 297 aa13.45□□□□□ -0.26
VARS2-205ENST00000469358 AARSP49588 968 aaKnown RBP eCLIP13.45□□□□□ -0.26
VARS2-205ENST00000469358 KIF11P52732 1056 aa13.45□□□□□ -0.26
VARS2-205ENST00000469358 GRM4Q14833 912 aa13.45□□□□□ -0.26
VARS2-205ENST00000469358 SNX12Q9UMY4 172 aa13.45□□□□□ -0.26
VARS2-205ENST00000469358 POTEMA6NI47 508 aa13.45□□□□□ -0.26
VARS2-205ENST00000469358 MYMKA6NI61 221 aa13.45□□□□□ -0.26
VARS2-205ENST00000469358 AKR1B10O60218 316 aa13.45□□□□□ -0.26
VARS2-205ENST00000469358 NAP1L1P55209 391 aaKnown RBP13.45□□□□□ -0.26
VARS2-205ENST00000469358 RASSF7Q02833 373 aa13.45□□□□□ -0.26
VARS2-205ENST00000469358 ARID5AQ03989 594 aa13.45□□□□□ -0.26
VARS2-205ENST00000469358 KCTD16Q68DU8 428 aa13.45□□□□□ -0.26
VARS2-205ENST00000469358 CLEC10AQ8IUN9 316 aa13.45□□□□□ -0.26
VARS2-205ENST00000469358 TBCKQ8TEA7 893 aa13.45□□□□□ -0.26
VARS2-205ENST00000469358 DHTKD1Q96HY7 919 aaPredicted RBP13.45□□□□□ -0.26
VARS2-205ENST00000469358 TBC1D7Q9P0N9 293 aa13.45□□□□□ -0.26
VARS2-205ENST00000469358 MYH10P35580 1976 aa13.45□□□□□ -0.26
VARS2-205ENST00000469358 XIRP1Q702N8 1843 aaKnown RBP13.45□□□□□ -0.26
VARS2-205ENST00000469358 SRCAPQ6ZRS2 3230 aa13.44□□□□□ -0.26
VARS2-205ENST00000469358 CCT5P48643 541 aa13.44□□□□□ -0.26
VARS2-205ENST00000469358 SH2D3CQ8N5H7 860 aa13.44□□□□□ -0.26
VARS2-205ENST00000469358 PROCA1Q8NCQ7 364 aaPredicted RBP13.44□□□□□ -0.26
VARS2-205ENST00000469358 LINC00116Q8NCU8 138 aa13.44□□□□□ -0.26
VARS2-205ENST00000469358 SPATA4Q8NEY3 305 aa13.44□□□□□ -0.26
VARS2-205ENST00000469358 ARL8AQ96BM9 186 aa13.44□□□□□ -0.26
VARS2-205ENST00000469358 PACSIN2Q9UNF0 486 aaPredicted RBP13.44□□□□□ -0.26
VARS2-205ENST00000469358 FRMPD2Q68DX3 1309 aaPredicted RBP13.44□□□□□ -0.26
VARS2-205ENST00000469358 GOLGA6CA6NDK9 693 aa13.44□□□□□ -0.26
VARS2-205ENST00000469358 GOLGA6DP0CG33 693 aa13.44□□□□□ -0.26
VARS2-205ENST00000469358 EIF6P56537 245 aaKnown RBP13.44□□□□□ -0.26
VARS2-205ENST00000469358 CKAP4Q07065 602 aaKnown RBP13.44□□□□□ -0.26
VARS2-205ENST00000469358 SF3B3Q15393 1217 aaKnown RBP13.44□□□□□ -0.26
VARS2-205ENST00000469358 TRADDQ15628 312 aa13.44□□□□□ -0.26
VARS2-205ENST00000469358 KCNK18Q7Z418 384 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms