RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 PYGLP06737 847 aa9.96□□□□□ -0.82
SMARCE1-207ENST00000469334 METAP2P50579 478 aaKnown RBP eCLIP9.96□□□□□ -0.82
SMARCE1-207ENST00000469334 MXRA7P84157 204 aa9.96□□□□□ -0.82
SMARCE1-207ENST00000469334 ZBED6P86452 979 aa9.96□□□□□ -0.82
SMARCE1-207ENST00000469334 HHATQ5VTY9 493 aa9.96□□□□□ -0.82
SMARCE1-207ENST00000469334 GIGYF2Q6Y7W6 1299 aaKnown RBP9.96□□□□□ -0.82
SMARCE1-207ENST00000469334 DDX46Q7L014 1031 aaKnown RBP9.96□□□□□ -0.82
SMARCE1-207ENST00000469334 C14orf37Q86TY3 774 aa9.96□□□□□ -0.82
SMARCE1-207ENST00000469334 TEKT4Q8WW24 435 aa9.96□□□□□ -0.82
SMARCE1-207ENST00000469334 PAGE5Q96GU1 130 aa9.96□□□□□ -0.82
SMARCE1-207ENST00000469334 NAF1Q96HR8 494 aaKnown RBP9.96□□□□□ -0.82
SMARCE1-207ENST00000469334 RBM41Q96IZ5 413 aaKnown RBP9.96□□□□□ -0.82
SMARCE1-207ENST00000469334 IFT74Q96LB3 600 aa9.96□□□□□ -0.82
SMARCE1-207ENST00000469334 NSRP1Q9H0G5 558 aaKnown RBP9.96□□□□□ -0.82
SMARCE1-207ENST00000469334 FOXP1Q9H334 677 aaPredicted RBP9.96□□□□□ -0.82
SMARCE1-207ENST00000469334 EPB41L5Q9HCM4 733 aa9.96□□□□□ -0.82
SMARCE1-207ENST00000469334 RBM12Q9NTZ6 932 aaKnown RBP9.96□□□□□ -0.82
SMARCE1-207ENST00000469334 WDR35Q9P2L0 1181 aa9.96□□□□□ -0.82
SMARCE1-207ENST00000469334 DISP2A7MBM2 1401 aa9.96□□□□□ -0.82
SMARCE1-207ENST00000469334 A0A1W2PQJ5 194 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 F8W031 263 aaPredicted RBP9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 H0YGN5 161 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 DDX58O95786 925 aaKnown RBP9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 GLI1P08151 1106 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 CSB-PGBD3P0DP91 1061 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 ABL2P42684 1182 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 DNM2P50570 870 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 LACTBP83111 547 aaPredicted RBP9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 GUCY2DQ02846 1103 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 PPARAQ07869 468 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 TAF11Q15544 211 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 FIGNQ5HY92 759 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 ERMARDQ5T6L9 678 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 ZNF507Q8TCN5 953 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 PLEKHG4BQ96PX9 1271 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 TRAPPC9Q96Q05 1148 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 TRIM4Q9C037 500 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 STRN4Q9NRL3 753 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 PAG1Q9NWQ8 432 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 RMND1Q9NWS8 449 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 NFS1Q9Y697 457 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 EID1Q9Y6B2 187 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 RNF113AO15541 343 aaKnown RBP9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 LCA5LO95447 670 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 BMP15O95972 392 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 IARSP41252 1262 aaKnown RBP9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 MATR3P43243 847 aaKnown RBP eCLIP9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 ANTXR2P58335 489 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 TNNC1P63316 161 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 ATP11AP98196 1134 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 ZNF844Q08AG5 666 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 CCDC96Q2M329 555 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 GNPTABQ3T906 1256 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 EPHA10Q5JZY3 1008 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 SPDYCQ5MJ68 293 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 C1QTNF12Q5T7M4 302 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 TRPM8Q7Z2W7 1104 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 PIGWQ7Z7B1 504 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 TBC1D1Q86TI0 1168 aaPredicted RBP9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 CASKIN2Q8WXE0 1202 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 XPO6Q96QU8 1125 aaKnown RBP9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 TTYH3Q9C0H2 523 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 ISCUQ9H1K1 167 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 POLD4Q9HCU8 107 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 GPHNQ9NQX3 736 aaPredicted RBP9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 PANK4Q9NVE7 773 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 SAMD15Q9P1V8 674 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 ANGEL1Q9UNK9 670 aaKnown RBP9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 PLEKHG1Q9ULL1 1385 aa9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 AFDNP55196 1824 aaKnown RBP9.95□□□□□ -0.82
SMARCE1-207ENST00000469334 MYH6P13533 1939 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 MYH2Q9UKX2 1941 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 NID2Q14112 1375 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 ZSCAN9O15535 394 aaPredicted RBP9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 PJA2O43164 708 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 MMP1P03956 469 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 MYBP10242 640 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 PYGBP11216 843 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 HSD17B3P37058 310 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 RANBP1P43487 201 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 ODF2Q5BJF6 829 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 NFRKBQ6P4R8 1299 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 SESTD1Q86VW0 696 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 IFT81Q8WYA0 676 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 AIFM3Q96NN9 605 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 THAP9Q9H5L6 903 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 PCDHGA4Q9Y5G9 962 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 CAPN6Q9Y6Q1 641 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 MYH1P12882 1939 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 SOS2Q07890 1332 aaPredicted RBP9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 DPPA5A6NC42 116 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 EVI5O60447 810 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 BAG3O95817 575 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 PARP1P09874 1014 aaKnown RBP9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 SRGNP10124 158 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 HNRNPH3P31942 346 aaKnown RBP9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 TOB1P50616 345 aaPredicted RBP9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 GUCY2FP51841 1108 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 EIF3BP55884 814 aaKnown RBP9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 GRIN1Q05586 938 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms