RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 YY1P25490 414 aa9.37□□□□□ -0.91
NPHP3-204ENST00000469232 GNA11P29992 359 aa9.37□□□□□ -0.91
NPHP3-204ENST00000469232 KRT2P35908 639 aa9.37□□□□□ -0.91
NPHP3-204ENST00000469232 TRAPPC10P48553 1259 aa9.37□□□□□ -0.91
NPHP3-204ENST00000469232 PABPC4Q13310 644 aaKnown RBP eCLIP9.37□□□□□ -0.91
NPHP3-204ENST00000469232 SAFBQ15424 915 aaKnown RBP eCLIP9.37□□□□□ -0.91
NPHP3-204ENST00000469232 TKFCQ3LXA3 575 aa9.37□□□□□ -0.91
NPHP3-204ENST00000469232 MCTP2Q6DN12 878 aa9.37□□□□□ -0.91
NPHP3-204ENST00000469232 HEATR3Q7Z4Q2 680 aa9.37□□□□□ -0.91
NPHP3-204ENST00000469232 HOMER1Q86YM7 354 aa9.37□□□□□ -0.91
NPHP3-204ENST00000469232 NOSTRINQ8IVI9 506 aa9.37□□□□□ -0.91
NPHP3-204ENST00000469232 BLIDQ8IZY5 108 aa9.37□□□□□ -0.91
NPHP3-204ENST00000469232 TMEM87AQ8NBN3 555 aa9.37□□□□□ -0.91
NPHP3-204ENST00000469232 BICD2Q8TD16 824 aa9.37□□□□□ -0.91
NPHP3-204ENST00000469232 GTF3C2Q8WUA4 911 aaPredicted RBP9.37□□□□□ -0.91
NPHP3-204ENST00000469232 CRYGNQ8WXF5 182 aa9.37□□□□□ -0.91
NPHP3-204ENST00000469232 ATG4CQ96DT6 458 aa9.37□□□□□ -0.91
NPHP3-204ENST00000469232 ASCC2Q9H1I8 757 aaPredicted RBP9.37□□□□□ -0.91
NPHP3-204ENST00000469232 MAP3K20Q9NYL2 800 aaKnown RBP9.37□□□□□ -0.91
NPHP3-204ENST00000469232 PCDHA1Q9Y5I3 950 aa9.37□□□□□ -0.91
NPHP3-204ENST00000469232 ADGRA2Q96PE1 1338 aa9.36□□□□□ -0.91
NPHP3-204ENST00000469232 SMCHD1A6NHR9 2005 aa9.36□□□□□ -0.91
NPHP3-204ENST00000469232 RASSF10A6NK89 507 aa9.36□□□□□ -0.91
NPHP3-204ENST00000469232 MEIS2O14770 477 aa9.36□□□□□ -0.91
NPHP3-204ENST00000469232 ZBED4O75132 1171 aa9.36□□□□□ -0.91
NPHP3-204ENST00000469232 BAG4O95429 457 aaKnown RBP9.36□□□□□ -0.91
NPHP3-204ENST00000469232 HSD17B4P51659 736 aa9.36□□□□□ -0.91
NPHP3-204ENST00000469232 NAPAP54920 295 aa9.36□□□□□ -0.91
NPHP3-204ENST00000469232 INHBEP58166 350 aa9.36□□□□□ -0.91
NPHP3-204ENST00000469232 NLRP5P59047 1200 aa9.36□□□□□ -0.91
NPHP3-204ENST00000469232 GUCY1B3Q02153 619 aa9.36□□□□□ -0.91
NPHP3-204ENST00000469232 NR5A1Q13285 461 aa9.36□□□□□ -0.91
NPHP3-204ENST00000469232 MYSM1Q5VVJ2 828 aa9.36□□□□□ -0.91
NPHP3-204ENST00000469232 CLEC4DQ8WXI8 215 aa9.36□□□□□ -0.91
NPHP3-204ENST00000469232 CCDC102AQ96A19 550 aa9.36□□□□□ -0.91
NPHP3-204ENST00000469232 KIFC2Q96AC6 838 aa9.36□□□□□ -0.91
NPHP3-204ENST00000469232 COA7Q96BR5 231 aa9.36□□□□□ -0.91
NPHP3-204ENST00000469232 PTPN18Q99952 460 aa9.36□□□□□ -0.91
NPHP3-204ENST00000469232 TANGO6Q9C0B7 1094 aa9.36□□□□□ -0.91
NPHP3-204ENST00000469232 C6orf50Q9HD87 102 aa9.36□□□□□ -0.91
NPHP3-204ENST00000469232 COL11A1P12107 1806 aaPredicted RBP9.36□□□□□ -0.91
NPHP3-204ENST00000469232 SMCO2A6NFE2 343 aa9.35□□□□□ -0.91
NPHP3-204ENST00000469232 MANSC4A6NHS7 340 aaPredicted RBP9.35□□□□□ -0.91
NPHP3-204ENST00000469232 BTBD19C9JJ37 291 aa9.35□□□□□ -0.91
NPHP3-204ENST00000469232 EDIL3O43854 480 aa9.35□□□□□ -0.91
NPHP3-204ENST00000469232 RAD21O60216 631 aa9.35□□□□□ -0.91
NPHP3-204ENST00000469232 CNMDO75829 334 aa9.35□□□□□ -0.91
NPHP3-204ENST00000469232 NASPP49321 788 aaPredicted RBP9.35□□□□□ -0.91
NPHP3-204ENST00000469232 TOB1P50616 345 aaPredicted RBP9.35□□□□□ -0.91
NPHP3-204ENST00000469232 MRPL12P52815 198 aaKnown RBP9.35□□□□□ -0.91
NPHP3-204ENST00000469232 HERVK_113P62684 666 aa9.35□□□□□ -0.91
NPHP3-204ENST00000469232 TMEM132BQ14DG7 1078 aa9.35□□□□□ -0.91
NPHP3-204ENST00000469232 EARS2Q5JPH6 523 aaKnown RBP9.35□□□□□ -0.91
NPHP3-204ENST00000469232 FERMT3Q86UX7 667 aa9.35□□□□□ -0.91
NPHP3-204ENST00000469232 CUL5Q93034 780 aa9.35□□□□□ -0.91
NPHP3-204ENST00000469232 P2RX7Q99572 595 aaKnown RBP9.35□□□□□ -0.91
NPHP3-204ENST00000469232 BRMS1Q9HCU9 246 aa9.35□□□□□ -0.91
NPHP3-204ENST00000469232 RTEL1Q9NZ71 1219 aa9.35□□□□□ -0.91
NPHP3-204ENST00000469232 RCOR1Q9UKL0 485 aa9.35□□□□□ -0.91
NPHP3-204ENST00000469232 PCDHA6Q9UN73 950 aa9.35□□□□□ -0.91
NPHP3-204ENST00000469232 MRPL11Q9Y3B7 192 aaKnown RBP9.35□□□□□ -0.91
NPHP3-204ENST00000469232 RABGAP1Q9Y3P9 1069 aa9.35□□□□□ -0.91
NPHP3-204ENST00000469232 PCDHA8Q9Y5H6 950 aa9.35□□□□□ -0.91
NPHP3-204ENST00000469232 ELP1O95163 1332 aa9.35□□□□□ -0.91
NPHP3-204ENST00000469232 FRMPD4Q14CM0 1322 aa9.35□□□□□ -0.91
NPHP3-204ENST00000469232 CCL15-CCL14A0A0B4J2E2 113 aa9.34□□□□□ -0.91
NPHP3-204ENST00000469232 TM4SF4P48230 202 aa9.34□□□□□ -0.91
NPHP3-204ENST00000469232 ADCY7P51828 1080 aa9.34□□□□□ -0.91
NPHP3-204ENST00000469232 IKQ13123 557 aaPredicted RBP9.34□□□□□ -0.91
NPHP3-204ENST00000469232 MMRN1Q13201 1228 aa9.34□□□□□ -0.91
NPHP3-204ENST00000469232 AP3B2Q13367 1082 aa9.34□□□□□ -0.91
NPHP3-204ENST00000469232 ORC2Q13416 577 aaPredicted RBP9.34□□□□□ -0.91
NPHP3-204ENST00000469232 CCL15Q16663 113 aa9.34□□□□□ -0.91
NPHP3-204ENST00000469232 RILPL1Q5EBL4 403 aa9.34□□□□□ -0.91
NPHP3-204ENST00000469232 GADL1Q6ZQY3 521 aa9.34□□□□□ -0.91
NPHP3-204ENST00000469232 KRT25Q7Z3Z0 450 aa9.34□□□□□ -0.91
NPHP3-204ENST00000469232 RIOX2Q8IUF8 465 aa9.34□□□□□ -0.91
NPHP3-204ENST00000469232 PIBF1Q8WXW3 757 aa9.34□□□□□ -0.91
NPHP3-204ENST00000469232 AGBL1Q96MI9 1066 aa9.34□□□□□ -0.91
NPHP3-204ENST00000469232 TEX13BQ9BXU2 312 aa9.34□□□□□ -0.91
NPHP3-204ENST00000469232 PSTPIP2Q9H939 334 aa9.34□□□□□ -0.91
NPHP3-204ENST00000469232 POLR3EQ9NVU0 708 aa9.34□□□□□ -0.91
NPHP3-204ENST00000469232 RBPJLQ9UBG7 517 aa9.34□□□□□ -0.91
NPHP3-204ENST00000469232 MORF4L1Q9UBU8 362 aa9.34□□□□□ -0.91
NPHP3-204ENST00000469232 THSD7BQ9C0I4 1608 aa9.34□□□□□ -0.91
NPHP3-204ENST00000469232 RBBP6Q7Z6E9 1792 aaKnown RBP9.34□□□□□ -0.91
NPHP3-204ENST00000469232 FOSP01100 380 aaPredicted RBP9.34□□□□□ -0.91
NPHP3-204ENST00000469232 OSBPP22059 807 aa9.34□□□□□ -0.91
NPHP3-204ENST00000469232 COPB2P35606 906 aa9.34□□□□□ -0.91
NPHP3-204ENST00000469232 GCLCP48506 637 aaPredicted RBP9.34□□□□□ -0.91
NPHP3-204ENST00000469232 APLP1P51693 650 aa9.34□□□□□ -0.91
NPHP3-204ENST00000469232 ZNF157P51786 506 aaPredicted RBP9.34□□□□□ -0.91
NPHP3-204ENST00000469232 SNAP25P60880 206 aa9.34□□□□□ -0.91
NPHP3-204ENST00000469232 PTPAQ15257 358 aa9.34□□□□□ -0.91
NPHP3-204ENST00000469232 REXO1Q8N1G1 1221 aaKnown RBP9.34□□□□□ -0.91
NPHP3-204ENST00000469232 SHCBP1Q8NEM2 672 aa9.34□□□□□ -0.91
NPHP3-204ENST00000469232 MBOAT7Q96N66 472 aa9.34□□□□□ -0.91
NPHP3-204ENST00000469232 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.34□□□□□ -0.91
NPHP3-204ENST00000469232 BTBD7Q9P203 1132 aa9.34□□□□□ -0.91
NPHP3-204ENST00000469232 PNMA3Q9UL41 463 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms