RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 CPVLQ9H3G5 476 aa14.48□□□□□ -0.09
HDAC3-204ENST00000469207 HELLSQ9NRZ9 838 aa14.48□□□□□ -0.09
HDAC3-204ENST00000469207 YBX2Q9Y2T7 364 aaKnown RBP14.48□□□□□ -0.09
HDAC3-204ENST00000469207 LCTP09848 1927 aa14.48□□□□□ -0.09
HDAC3-204ENST00000469207 HSPD1P10809 573 aaKnown RBP14.47□□□□□ -0.09
HDAC3-204ENST00000469207 TOP1P11387 765 aaKnown RBP14.47□□□□□ -0.09
HDAC3-204ENST00000469207 CYP2C9P11712 490 aa14.47□□□□□ -0.09
HDAC3-204ENST00000469207 ALDH5A1P51649 535 aaPredicted RBP14.47□□□□□ -0.09
HDAC3-204ENST00000469207 RRP1P56182 461 aaKnown RBP14.47□□□□□ -0.09
HDAC3-204ENST00000469207 MCMDC2Q4G0Z9 681 aa14.47□□□□□ -0.09
HDAC3-204ENST00000469207 PSRC1Q6PGN9 363 aaPredicted RBP14.47□□□□□ -0.09
HDAC3-204ENST00000469207 SLC30A10Q6XR72 485 aa14.47□□□□□ -0.09
HDAC3-204ENST00000469207 MORC4Q8TE76 937 aa14.47□□□□□ -0.09
HDAC3-204ENST00000469207 CLEC4DQ8WXI8 215 aa14.47□□□□□ -0.09
HDAC3-204ENST00000469207 COPS5Q92905 334 aa14.47□□□□□ -0.09
HDAC3-204ENST00000469207 ZKSCAN3Q9BRR0 538 aa14.47□□□□□ -0.09
HDAC3-204ENST00000469207 NOC4LQ9BVI4 516 aaKnown RBP14.47□□□□□ -0.09
HDAC3-204ENST00000469207 WDR11Q9BZH6 1224 aa14.47□□□□□ -0.09
HDAC3-204ENST00000469207 TRMT13Q9NUP7 481 aaKnown RBP14.47□□□□□ -0.09
HDAC3-204ENST00000469207 MYO9BQ13459 2157 aa14.46□□□□□ -0.09
HDAC3-204ENST00000469207 ZEB2O60315 1214 aa14.46□□□□□ -0.09
HDAC3-204ENST00000469207 CABYRO75952 493 aa14.46□□□□□ -0.09
HDAC3-204ENST00000469207 MYL3P08590 195 aa14.46□□□□□ -0.09
HDAC3-204ENST00000469207 GOLGA8HP0CJ92 632 aa14.46□□□□□ -0.09
HDAC3-204ENST00000469207 PDHBP11177 359 aa14.46□□□□□ -0.09
HDAC3-204ENST00000469207 DUSP28Q4G0W2 176 aa14.46□□□□□ -0.09
HDAC3-204ENST00000469207 PPP4R3BQ5MIZ7 849 aa14.46□□□□□ -0.09
HDAC3-204ENST00000469207 TBC1D5Q92609 795 aa14.46□□□□□ -0.09
HDAC3-204ENST00000469207 ALDH8A1Q9H2A2 487 aaPredicted RBP14.46□□□□□ -0.09
HDAC3-204ENST00000469207 VTA1Q9NP79 307 aa14.46□□□□□ -0.09
HDAC3-204ENST00000469207 ZBTB47Q9UFB7 747 aaPredicted RBP14.46□□□□□ -0.09
HDAC3-204ENST00000469207 Q9Y3F1 56 aa14.46□□□□□ -0.09
HDAC3-204ENST00000469207 CHD9Q3L8U1 2897 aa14.45□□□□□ -0.1
HDAC3-204ENST00000469207 LRRC37A2A6NM11 1700 aa14.45□□□□□ -0.1
HDAC3-204ENST00000469207 TRIM6-TRIM34B2RNG4 842 aa14.45□□□□□ -0.1
HDAC3-204ENST00000469207 IGFBP4P22692 258 aa14.45□□□□□ -0.1
HDAC3-204ENST00000469207 B4GALNT3Q6L9W6 998 aa14.45□□□□□ -0.1
HDAC3-204ENST00000469207 TBC1D10CQ8IV04 446 aa14.45□□□□□ -0.1
HDAC3-204ENST00000469207 RILPL2Q969X0 211 aa14.45□□□□□ -0.1
HDAC3-204ENST00000469207 GAS2L1Q99501 681 aaPredicted RBP14.45□□□□□ -0.1
HDAC3-204ENST00000469207 LNPKQ9C0E8 428 aa14.45□□□□□ -0.1
HDAC3-204ENST00000469207 UBA5Q9GZZ9 404 aa14.45□□□□□ -0.1
HDAC3-204ENST00000469207 TCP11L1Q9NUJ3 509 aa14.45□□□□□ -0.1
HDAC3-204ENST00000469207 MSRAQ9UJ68 235 aa14.45□□□□□ -0.1
HDAC3-204ENST00000469207 RBM47A0AV96 593 aaKnown RBP14.44□□□□□ -0.1
HDAC3-204ENST00000469207 RPS6P62753 249 aaKnown RBP14.44□□□□□ -0.1
HDAC3-204ENST00000469207 PURAQ00577 322 aaKnown RBP14.44□□□□□ -0.1
HDAC3-204ENST00000469207 TTLL4Q14679 1199 aa14.44□□□□□ -0.1
HDAC3-204ENST00000469207 RNF207Q6ZRF8 634 aa14.44□□□□□ -0.1
HDAC3-204ENST00000469207 DEFB128Q7Z7B8 93 aa14.44□□□□□ -0.1
HDAC3-204ENST00000469207 OR6J1Q8NGC5 347 aa14.44□□□□□ -0.1
HDAC3-204ENST00000469207 ADD3Q9UEY8 706 aaKnown RBP14.44□□□□□ -0.1
HDAC3-204ENST00000469207 ZBBXA8MT70 800 aa14.43□□□□□ -0.1
HDAC3-204ENST00000469207 RFXAPO00287 272 aa14.43□□□□□ -0.1
HDAC3-204ENST00000469207 ZNF543Q08ER8 600 aa14.43□□□□□ -0.1
HDAC3-204ENST00000469207 NBPF20Q3BBV1 942 aa14.43□□□□□ -0.1
HDAC3-204ENST00000469207 USH1GQ495M9 461 aa14.43□□□□□ -0.1
HDAC3-204ENST00000469207 AKNAD1Q5T1N1 836 aa14.43□□□□□ -0.1
HDAC3-204ENST00000469207 MFSD6Q6ZSS7 791 aa14.43□□□□□ -0.1
HDAC3-204ENST00000469207 SLC28A3Q9HAS3 691 aa14.43□□□□□ -0.1
HDAC3-204ENST00000469207 TNKSO95271 1327 aa14.42□□□□□ -0.1
HDAC3-204ENST00000469207 NEDD4P46934 1319 aa14.42□□□□□ -0.1
HDAC3-204ENST00000469207 GBF1Q92538 1859 aa14.42□□□□□ -0.1
HDAC3-204ENST00000469207 ARIH2O95376 493 aa14.42□□□□□ -0.1
HDAC3-204ENST00000469207 SNHG28P0DPA3 235 aa14.42□□□□□ -0.1
HDAC3-204ENST00000469207 CHMP4BP1P59074 171 aa14.42□□□□□ -0.1
HDAC3-204ENST00000469207 PDE4DQ08499 809 aa14.42□□□□□ -0.1
HDAC3-204ENST00000469207 HDAC1Q13547 482 aaPredicted RBP14.42□□□□□ -0.1
HDAC3-204ENST00000469207 FAM47CQ5HY64 1035 aa14.42□□□□□ -0.1
HDAC3-204ENST00000469207 TJAP1Q5JTD0 557 aa14.42□□□□□ -0.1
HDAC3-204ENST00000469207 CERS4Q9HA82 394 aa14.42□□□□□ -0.1
HDAC3-204ENST00000469207 SLC4A7Q9Y6M7 1214 aa14.42□□□□□ -0.1
HDAC3-204ENST00000469207 CCDC171Q6TFL3 1326 aa14.41□□□□□ -0.1
HDAC3-204ENST00000469207 IGHDP01880 384 aa14.41□□□□□ -0.1
HDAC3-204ENST00000469207 TXNP10599 105 aaKnown RBP14.41□□□□□ -0.1
HDAC3-204ENST00000469207 SDSP20132 328 aa14.41□□□□□ -0.1
HDAC3-204ENST00000469207 RAB30Q15771 203 aa14.41□□□□□ -0.1
HDAC3-204ENST00000469207 RPUSD2Q8IZ73 545 aaKnown RBP14.41□□□□□ -0.1
HDAC3-204ENST00000469207 SYMPKQ92797 1274 aaKnown RBP14.41□□□□□ -0.1
HDAC3-204ENST00000469207 TTC14Q96N46 770 aa14.41□□□□□ -0.1
HDAC3-204ENST00000469207 TAAR1Q96RJ0 339 aa14.41□□□□□ -0.1
HDAC3-204ENST00000469207 MTG1Q9BT17 334 aaPredicted RBP14.41□□□□□ -0.1
HDAC3-204ENST00000469207 POLR3EQ9NVU0 708 aa14.41□□□□□ -0.1
HDAC3-204ENST00000469207 COL20A1Q9P218 1284 aa14.41□□□□□ -0.1
HDAC3-204ENST00000469207 CHD7Q9P2D1 2997 aa14.41□□□□□ -0.1
HDAC3-204ENST00000469207 MUC3AQ02505 3323 aa14.41□□□□□ -0.1
HDAC3-204ENST00000469207 SCN5AQ14524 2016 aa14.41□□□□□ -0.1
HDAC3-204ENST00000469207 EDNRBP24530 442 aa14.4□□□□□ -0.1
HDAC3-204ENST00000469207 CPT1AP50416 773 aa14.4□□□□□ -0.1
HDAC3-204ENST00000469207 PPP2R5BQ15173 497 aa14.4□□□□□ -0.1
HDAC3-204ENST00000469207 MICALL1Q8N3F8 863 aa14.4□□□□□ -0.1
HDAC3-204ENST00000469207 MTIF3Q9H2K0 278 aaKnown RBP14.4□□□□□ -0.1
HDAC3-204ENST00000469207 VAT1LQ9HCJ6 419 aa14.4□□□□□ -0.1
HDAC3-204ENST00000469207 GPHNQ9NQX3 736 aaPredicted RBP14.4□□□□□ -0.1
HDAC3-204ENST00000469207 REV3LO60673 3130 aa14.39□□□□□ -0.11
HDAC3-204ENST00000469207 A6NJR5 290 aa14.39□□□□□ -0.11
HDAC3-204ENST00000469207 ZNF213O14771 459 aa14.39□□□□□ -0.11
HDAC3-204ENST00000469207 KDM4AO75164 1064 aa14.39□□□□□ -0.11
HDAC3-204ENST00000469207 ARHGEF15O94989 841 aa14.39□□□□□ -0.11
HDAC3-204ENST00000469207 ATP2A2P16615 1042 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms