RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 FNTAP49354 379 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 LIG3P49916 1009 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 ROR2Q01974 943 aaKnown RBP5.45□□□□□ -1.54
SF3B1-207ENST00000468925 AKAP17AQ02040 695 aaKnown RBP5.45□□□□□ -1.54
SF3B1-207ENST00000468925 DNM1Q05193 864 aaKnown RBP5.45□□□□□ -1.54
SF3B1-207ENST00000468925 CKAP4Q07065 602 aaKnown RBP5.45□□□□□ -1.54
SF3B1-207ENST00000468925 ACTN3Q08043 901 aaPredicted RBP5.45□□□□□ -1.54
SF3B1-207ENST00000468925 RIPK1Q13546 671 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 CCDC96Q2M329 555 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 CCDC40Q4G0X9 1142 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 ALS2CLQ60I27 953 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 LARP1BQ659C4 914 aaKnown RBP5.45□□□□□ -1.54
SF3B1-207ENST00000468925 SDE2Q6IQ49 451 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 KCNV1Q6PIU1 500 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 CTAGE6Q86UF2 777 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 CTAGE4Q8IX94 777 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 RGL4Q8IZJ4 473 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 ARFGAP2Q8N6H7 521 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 ZNF513Q8N8E2 541 aaPredicted RBP5.45□□□□□ -1.54
SF3B1-207ENST00000468925 OR8K1Q8NGG5 319 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 CFAP61Q8NHU2 1237 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 BCAS4Q8TDM0 211 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 SNRNP27Q8WVK2 155 aaKnown RBP5.45□□□□□ -1.54
SF3B1-207ENST00000468925 TTC14Q96N46 770 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 ZNF396Q96N95 335 aaPredicted RBP5.45□□□□□ -1.54
SF3B1-207ENST00000468925 FMNL2Q96PY5 1086 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 ALS2CR12Q96Q35 445 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 PRAM1Q96QH2 718 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 TINF2Q9BSI4 451 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 BICC1Q9H694 974 aaKnown RBP5.45□□□□□ -1.54
SF3B1-207ENST00000468925 IRAK4Q9NWZ3 460 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 STAP2Q9UGK3 403 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 HOOK1Q9UJC3 728 aaKnown RBP5.45□□□□□ -1.54
SF3B1-207ENST00000468925 CAPN7Q9Y6W3 813 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 SAMD9LQ8IVG5 1584 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 RAPGEF6Q8TEU7 1601 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 hCG_2014768A0A024R1R8 64 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 GOLGA6CA6NDK9 693 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 C9orf172C9J069 976 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 HIP1O00291 1037 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 PRC1O43663 620 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 CUTAO60888 179 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 MICAL2O94851 1124 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 SEC31AO94979 1220 aaKnown RBP5.44□□□□□ -1.54
SF3B1-207ENST00000468925 GOLGA6DP0CG33 693 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 ELNP15502 786 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 ZKSCAN1P17029 563 aaPredicted RBP5.44□□□□□ -1.54
SF3B1-207ENST00000468925 PAX7P23759 505 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 IRAK1P51617 712 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 ARSDP51689 593 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 GNG11P61952 73 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 FZD5Q13467 585 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 SEPT2Q15019 361 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 PTPROQ16827 1216 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 SPHKAPQ2M3C7 1700 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 AMOTQ4VCS5 1084 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 HSP90AB4PQ58FF6 505 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 HSP90AB2PQ58FF8 381 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 PRSS36Q5K4E3 855 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 SH2D4BQ5SQS7 431 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 PERM1Q5SV97 790 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 CCDC181Q5TID7 509 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 IER5Q5VY09 327 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 C9orf131Q5VYM1 1079 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 NUGGCQ68CJ6 796 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 CDCA2Q69YH5 1023 aaPredicted RBP5.44□□□□□ -1.54
SF3B1-207ENST00000468925 CAPRIN2Q6IMN6 1127 aaKnown RBP5.44□□□□□ -1.54
SF3B1-207ENST00000468925 TLDC1Q6P9B6 456 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 ELMSAN1Q6PJG2 1045 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 SLC30A9Q6PML9 568 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 DHX32Q7L7V1 743 aaKnown RBP5.44□□□□□ -1.54
SF3B1-207ENST00000468925 UBE3BQ7Z3V4 1068 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 CMTR1Q8N1G2 835 aaKnown RBP5.44□□□□□ -1.54
SF3B1-207ENST00000468925 TRIM58Q8NG06 486 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 SMARCC2Q8TAQ2 1214 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 KAT2BQ92831 832 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 TP53INP1Q96A56 240 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 IFT43Q96FT9 208 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 SPAG5Q96R06 1193 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 DNAJC25Q9H1X3 360 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 GOLGA6AQ9NYA3 693 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 DIP2BQ9P265 1576 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 SWAP70Q9UH65 585 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 TNNQ9UQP3 1299 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 TBX22Q9Y458 520 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 CDHR2Q9BYE9 1310 aa5.44□□□□□ -1.54
SF3B1-207ENST00000468925 SBNO1A3KN83 1393 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 KIAA0232Q92628 1395 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 KDM6AO15550 1401 aaPredicted RBP5.43□□□□□ -1.54
SF3B1-207ENST00000468925 CPSF1Q10570 1443 aaKnown RBP5.43□□□□□ -1.54
SF3B1-207ENST00000468925 A0A1W2PQ27 194 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 A0A1W2PQ64 194 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 A0A1W2PQD8 194 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 CTAGE9A4FU28 777 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 CFAP73A6NFT4 308 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 ZBTB42B2RXF5 422 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 SCAMP3O14828 347 aaKnown RBP5.43□□□□□ -1.54
SF3B1-207ENST00000468925 HYAL3O43820 417 aaPredicted RBP5.43□□□□□ -1.54
SF3B1-207ENST00000468925 BUB1BO60566 1050 aaPredicted RBP5.43□□□□□ -1.54
SF3B1-207ENST00000468925 PRMT3O60678 531 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms