RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 C17orf99Q6UX52 265 aa6.79□□□□□ -1.32
SHQ1-205ENST00000468371 EP400NLQ6ZTU2 488 aa6.79□□□□□ -1.32
SHQ1-205ENST00000468371 SEPT14Q6ZU15 432 aa6.79□□□□□ -1.32
SHQ1-205ENST00000468371 PAWRQ96IZ0 340 aaKnown RBP6.79□□□□□ -1.32
SHQ1-205ENST00000468371 MOV10L1Q9BXT6 1211 aaKnown RBP6.79□□□□□ -1.32
SHQ1-205ENST00000468371 GTPBP4Q9BZE4 634 aaKnown RBP6.79□□□□□ -1.32
SHQ1-205ENST00000468371 TNRC6CQ9HCJ0 1690 aaKnown RBP6.79□□□□□ -1.32
SHQ1-205ENST00000468371 XPNPEP3Q9NQH7 507 aa6.79□□□□□ -1.32
SHQ1-205ENST00000468371 PPP1R9AQ9ULJ8 1098 aa6.79□□□□□ -1.32
SHQ1-205ENST00000468371 RBM8AQ9Y5S9 174 aaKnown RBP6.79□□□□□ -1.32
SHQ1-205ENST00000468371 ARFGEF2Q9Y6D5 1785 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 A0A0D9SFI3 127 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 KLRF2D3W0D1 207 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 PRC1O43663 620 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 EN2P19622 333 aaPredicted RBP6.78□□□□□ -1.32
SHQ1-205ENST00000468371 NT5C2P49902 561 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 NAPAP54920 295 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 DSCC1Q9BVC3 393 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 UNC93B1Q9H1C4 597 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 EMILIN3Q9NT22 766 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 PCDHA1Q9Y5I3 950 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 GCOM1H8Y6P7 765 aaPredicted RBP6.78□□□□□ -1.32
SHQ1-205ENST00000468371 BACH1O14867 736 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 ZBTB43O43298 467 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 CDKL5O76039 1030 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 POLR2MP0CAP2 368 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 HOXA7P31268 230 aaPredicted RBP6.78□□□□□ -1.32
SHQ1-205ENST00000468371 ANAPC15P60006 121 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 SNAP25P60880 206 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 PPP2R5BQ15173 497 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 ANKRD1Q15327 319 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 PLCD3Q8N3E9 789 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 INTS4Q96HW7 963 aaKnown RBP6.78□□□□□ -1.32
SHQ1-205ENST00000468371 NEK1Q96PY6 1258 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 UBE2OQ9C0C9 1292 aaKnown RBP6.78□□□□□ -1.32
SHQ1-205ENST00000468371 TMEM39AQ9NV64 488 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 CFAP45Q9UL16 551 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 ANKRD31Q8N7Z5 1873 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 CLSTN1O94985 981 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 AKR1A1P14550 325 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 RASA1P20936 1047 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 SFPQP23246 707 aaKnown RBP eCLIP6.78□□□□□ -1.32
SHQ1-205ENST00000468371 RAB11FIP4Q86YS3 637 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 R3HDMLQ9H3Y0 253 aa6.78□□□□□ -1.32
SHQ1-205ENST00000468371 SH2B1Q9NRF2 756 aaPredicted RBP6.78□□□□□ -1.32
SHQ1-205ENST00000468371 SIPA1L3O60292 1781 aaPredicted RBP6.77□□□□□ -1.33
SHQ1-205ENST00000468371 TNKSO95271 1327 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 PQBP1O60828 265 aaKnown RBP6.77□□□□□ -1.33
SHQ1-205ENST00000468371 PTPREP23469 700 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 HSP90AA4PQ58FG1 418 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 NOM1Q5C9Z4 860 aaKnown RBP6.77□□□□□ -1.33
SHQ1-205ENST00000468371 WWC2Q6AWC2 1192 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 TMCO3Q6UWJ1 677 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 TMC6Q7Z403 805 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 NLRX1Q86UT6 975 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 KRT222Q8N1A0 295 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 GLG1Q92896 1179 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 LZTS2Q9BRK4 669 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 AZI2Q9H6S1 392 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 ZSWIM4Q9H7M6 989 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 STAP2Q9UGK3 403 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 PFASO15067 1338 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 KIF28PB7ZC32 967 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 M0QZ92 97 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 SGPL1O95470 568 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 TNFAIP2Q03169 654 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 TTLL4Q14679 1199 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 MTFR1Q15390 333 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 RTN1Q16799 776 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 DGKHQ86XP1 1220 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 TICAM2Q86XR7 235 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 PXYLP1Q8TE99 480 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 ZNF396Q96N95 335 aaPredicted RBP6.77□□□□□ -1.33
SHQ1-205ENST00000468371 C11orf49Q9H6J7 331 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 GABRQQ9UN88 632 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 ZDHHC9Q9Y397 364 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 WDR90Q96KV7 1748 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 NLRP5P59047 1200 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 STXBP2Q15833 593 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 FSIP1Q8NA03 581 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 GTF3C6Q969F1 213 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 TMEM47Q9BQJ4 181 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 PORCNQ9H237 461 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 DDX19AQ9NUU7 478 aaKnown RBP6.77□□□□□ -1.33
SHQ1-205ENST00000468371 PKD2L1Q9P0L9 805 aa6.77□□□□□ -1.33
SHQ1-205ENST00000468371 BCORQ6W2J9 1755 aa6.76□□□□□ -1.33
SHQ1-205ENST00000468371 COL11A2P13942 1736 aaPredicted RBP6.76□□□□□ -1.33
SHQ1-205ENST00000468371 SPDYE16A6NNV3 312 aaPredicted RBP6.76□□□□□ -1.33
SHQ1-205ENST00000468371 PHF20L1A8MW92 1017 aa6.76□□□□□ -1.33
SHQ1-205ENST00000468371 SNW1Q13573 536 aaKnown RBP6.76□□□□□ -1.33
SHQ1-205ENST00000468371 NSUN6Q8TEA1 469 aaKnown RBP6.76□□□□□ -1.33
SHQ1-205ENST00000468371 ERCC4Q92889 916 aaPredicted RBP6.76□□□□□ -1.33
SHQ1-205ENST00000468371 TINF2Q9BSI4 451 aa6.76□□□□□ -1.33
SHQ1-205ENST00000468371 PAXBP1Q9Y5B6 917 aa6.76□□□□□ -1.33
SHQ1-205ENST00000468371 CASP8AP2Q9UKL3 1982 aa6.76□□□□□ -1.33
SHQ1-205ENST00000468371 CAPN2P17655 700 aa6.76□□□□□ -1.33
SHQ1-205ENST00000468371 DDIT3P35638 169 aa6.76□□□□□ -1.33
SHQ1-205ENST00000468371 METAP2P50579 478 aaKnown RBP eCLIP6.76□□□□□ -1.33
SHQ1-205ENST00000468371 HSP90B2PQ58FF3 399 aa6.76□□□□□ -1.33
SHQ1-205ENST00000468371 SH3D19Q5HYK7 790 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms