RNA–Protein interactions for RNA: ENST00000467957.1

YBX1-204, Transcript of Y-box binding protein 1, humanhuman

TSL 2

Gene YBX1, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-204ENST00000467957 GJC2Q5T442 439 aaPredicted RBP21.65■■□□□ 1.06
YBX1-204ENST00000467957 HOMER1Q86YM7 354 aa21.65■■□□□ 1.06
YBX1-204ENST00000467957 SAMD3Q8N6K7 520 aa21.65■■□□□ 1.06
YBX1-204ENST00000467957 PCDHA1Q9Y5I3 950 aa21.65■■□□□ 1.06
YBX1-204ENST00000467957 KBTBD13C9JR72 458 aa21.64■■□□□ 1.05
YBX1-204ENST00000467957 ADAMTS4O75173 837 aa21.64■■□□□ 1.05
YBX1-204ENST00000467957 RNF180Q86T96 592 aa21.64■■□□□ 1.05
YBX1-204ENST00000467957 FANCBQ8NB91 859 aa21.64■■□□□ 1.05
YBX1-204ENST00000467957 TBC1D5Q92609 795 aa21.64■■□□□ 1.05
YBX1-204ENST00000467957 MPHOSPH6Q99547 160 aaKnown RBP21.64■■□□□ 1.05
YBX1-204ENST00000467957 USP26Q9BXU7 913 aa21.64■■□□□ 1.05
YBX1-204ENST00000467957 VTA1Q9NP79 307 aa21.64■■□□□ 1.05
YBX1-204ENST00000467957 MAP3K20Q9NYL2 800 aaKnown RBP21.64■■□□□ 1.05
YBX1-204ENST00000467957 NR2E3Q9Y5X4 410 aa21.64■■□□□ 1.05
YBX1-204ENST00000467957 OPLAHO14841 1288 aa21.63■■□□□ 1.05
YBX1-204ENST00000467957 EVI5O60447 810 aa21.63■■□□□ 1.05
YBX1-204ENST00000467957 EDNRBP24530 442 aa21.63■■□□□ 1.05
YBX1-204ENST00000467957 TAPT1Q6NXT6 567 aa21.63■■□□□ 1.05
YBX1-204ENST00000467957 APOA5Q6Q788 366 aa21.63■■□□□ 1.05
YBX1-204ENST00000467957 SYNE3Q6ZMZ3 975 aa21.63■■□□□ 1.05
YBX1-204ENST00000467957 SYTL5Q8TDW5 730 aaPredicted RBP21.63■■□□□ 1.05
YBX1-204ENST00000467957 TCEANC2Q96MN5 208 aa21.63■■□□□ 1.05
YBX1-204ENST00000467957 JAKMIP1Q96N16 626 aaKnown RBP21.63■■□□□ 1.05
YBX1-204ENST00000467957 SENP6Q9GZR1 1112 aaPredicted RBP21.63■■□□□ 1.05
YBX1-204ENST00000467957 SYNRGQ9UMZ2 1314 aa21.62■■□□□ 1.05
YBX1-204ENST00000467957 B4DLN1 442 aa21.62■■□□□ 1.05
YBX1-204ENST00000467957 ADCY6O43306 1168 aa21.62■■□□□ 1.05
YBX1-204ENST00000467957 PGK1P00558 417 aa21.62■■□□□ 1.05
YBX1-204ENST00000467957 RXRAP19793 462 aa21.62■■□□□ 1.05
YBX1-204ENST00000467957 HSD17B4P51659 736 aa21.62■■□□□ 1.05
YBX1-204ENST00000467957 MRPL12P52815 198 aaKnown RBP21.62■■□□□ 1.05
YBX1-204ENST00000467957 NKX3-2P78367 333 aa21.62■■□□□ 1.05
YBX1-204ENST00000467957 BLOC1S2Q6QNY1 142 aa21.62■■□□□ 1.05
YBX1-204ENST00000467957 FBXL16Q8N461 479 aa21.62■■□□□ 1.05
YBX1-204ENST00000467957 SRBD1Q8N5C6 995 aaKnown RBP21.62■■□□□ 1.05
YBX1-204ENST00000467957 KLHDC9Q8NEP7 349 aa21.62■■□□□ 1.05
YBX1-204ENST00000467957 LENG1Q96BZ8 264 aaPredicted RBP21.62■■□□□ 1.05
YBX1-204ENST00000467957 UPF3AQ9H1J1 476 aaKnown RBP21.62■■□□□ 1.05
YBX1-204ENST00000467957 DDX49Q9Y6V7 483 aaKnown RBP21.62■■□□□ 1.05
YBX1-204ENST00000467957 BAZ2BQ9UIF8 2168 aaKnown RBP21.62■■□□□ 1.05
YBX1-204ENST00000467957 PLEKHA8P1O95397 391 aa21.61■■□□□ 1.05
YBX1-204ENST00000467957 PSMA5P28066 241 aa21.61■■□□□ 1.05
YBX1-204ENST00000467957 CST5P28325 142 aaPredicted RBP21.61■■□□□ 1.05
YBX1-204ENST00000467957 RCAN1P53805 252 aa21.61■■□□□ 1.05
YBX1-204ENST00000467957 GJA9P57773 515 aa21.61■■□□□ 1.05
YBX1-204ENST00000467957 TNFAIP2Q03169 654 aa21.61■■□□□ 1.05
YBX1-204ENST00000467957 IQSEC1Q6DN90 963 aa21.61■■□□□ 1.05
YBX1-204ENST00000467957 TMTC3Q6ZXV5 915 aa21.61■■□□□ 1.05
YBX1-204ENST00000467957 MICU3Q86XE3 530 aa21.61■■□□□ 1.05
YBX1-204ENST00000467957 FBXO16Q8IX29 292 aaPredicted RBP21.61■■□□□ 1.05
YBX1-204ENST00000467957 RRP36Q96EU6 259 aaKnown RBP21.61■■□□□ 1.05
YBX1-204ENST00000467957 TSEN34Q9BSV6 310 aaKnown RBP21.61■■□□□ 1.05
YBX1-204ENST00000467957 COL20A1Q9P218 1284 aa21.61■■□□□ 1.05
YBX1-204ENST00000467957 BRPF3Q9ULD4 1205 aa21.61■■□□□ 1.05
YBX1-204ENST00000467957 PHF24Q9UPV7 400 aa21.61■■□□□ 1.05
YBX1-204ENST00000467957 H0YGN5 161 aa21.6■■□□□ 1.05
YBX1-204ENST00000467957 CFBP00751 764 aa21.6■■□□□ 1.05
YBX1-204ENST00000467957 RPS6KB1P23443 525 aa21.6■■□□□ 1.05
YBX1-204ENST00000467957 ADCYAP1R1P41586 468 aa21.6■■□□□ 1.05
YBX1-204ENST00000467957 EEPD1Q7L9B9 569 aa21.6■■□□□ 1.05
YBX1-204ENST00000467957 NSUN6Q8TEA1 469 aaKnown RBP21.6■■□□□ 1.05
YBX1-204ENST00000467957 TAAR1Q96RJ0 339 aa21.6■■□□□ 1.05
YBX1-204ENST00000467957 SPC25Q9HBM1 224 aa21.6■■□□□ 1.05
YBX1-204ENST00000467957 PDGFCQ9NRA1 345 aa21.6■■□□□ 1.05
YBX1-204ENST00000467957 RBM28Q9NW13 759 aaKnown RBP21.6■■□□□ 1.05
YBX1-204ENST00000467957 GNEQ9Y223 722 aaKnown RBP21.6■■□□□ 1.05
YBX1-204ENST00000467957 Q9Y3F1 56 aa21.6■■□□□ 1.05
YBX1-204ENST00000467957 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.59■■□□□ 1.05
YBX1-204ENST00000467957 RBM47A0AV96 593 aaKnown RBP21.59■■□□□ 1.05
YBX1-204ENST00000467957 ZBTB43O43298 467 aa21.59■■□□□ 1.05
YBX1-204ENST00000467957 MYCNP04198 464 aaPredicted RBP21.59■■□□□ 1.05
YBX1-204ENST00000467957 CPA1P15085 419 aa21.59■■□□□ 1.05
YBX1-204ENST00000467957 PDE4DQ08499 809 aa21.59■■□□□ 1.05
YBX1-204ENST00000467957 LRRC26Q2I0M4 334 aa21.59■■□□□ 1.05
YBX1-204ENST00000467957 CCSAPQ6IQ19 270 aaPredicted RBP21.59■■□□□ 1.05
YBX1-204ENST00000467957 RAB11FIP4Q86YS3 637 aa21.59■■□□□ 1.05
YBX1-204ENST00000467957 IWS1Q96ST2 819 aa21.59■■□□□ 1.05
YBX1-204ENST00000467957 AGXT2Q9BYV1 514 aa21.59■■□□□ 1.05
YBX1-204ENST00000467957 SEC63Q9UGP8 760 aaKnown RBP21.59■■□□□ 1.05
YBX1-204ENST00000467957 KLF18A0A0U1RQI7 1052 aa21.58■■□□□ 1.05
YBX1-204ENST00000467957 SMPD1P17405 629 aa21.58■■□□□ 1.05
YBX1-204ENST00000467957 FGD1P98174 961 aa21.58■■□□□ 1.05
YBX1-204ENST00000467957 SNX17Q15036 470 aa21.58■■□□□ 1.05
YBX1-204ENST00000467957 Q6ZUG5 572 aa21.58■■□□□ 1.05
YBX1-204ENST00000467957 CMTR1Q8N1G2 835 aaKnown RBP21.58■■□□□ 1.05
YBX1-204ENST00000467957 RMDN3Q96TC7 470 aa21.58■■□□□ 1.05
YBX1-204ENST00000467957 MOXD2PA6NHM9 499 aa21.57■■□□□ 1.04
YBX1-204ENST00000467957 CASTP20810 708 aaKnown RBP21.57■■□□□ 1.04
YBX1-204ENST00000467957 PPP2R5BQ15173 497 aa21.57■■□□□ 1.04
YBX1-204ENST00000467957 RTN1Q16799 776 aa21.57■■□□□ 1.04
YBX1-204ENST00000467957 C1orf53Q5VUE5 145 aa21.57■■□□□ 1.04
YBX1-204ENST00000467957 SLC39A5Q6ZMH5 540 aa21.57■■□□□ 1.04
YBX1-204ENST00000467957 PCSK9Q8NBP7 692 aaKnown RBP21.57■■□□□ 1.04
YBX1-204ENST00000467957 PIBF1Q8WXW3 757 aa21.57■■□□□ 1.04
YBX1-204ENST00000467957 TM6SF1Q9BZW5 370 aa21.57■■□□□ 1.04
YBX1-204ENST00000467957 ZSWIM6Q9HCJ5 1215 aa21.57■■□□□ 1.04
YBX1-204ENST00000467957 MYADML2A6NDP7 307 aa21.56■■□□□ 1.04
YBX1-204ENST00000467957 GCOM1H8Y6P7 765 aaPredicted RBP21.56■■□□□ 1.04
YBX1-204ENST00000467957 CTAGE5O15320 804 aa21.56■■□□□ 1.04
YBX1-204ENST00000467957 EIF5BO60841 1220 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms