RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 B4DLN1 442 aa21.13■□□□□ 0.97
CGREF1-208ENST00000467539 C6orf222P0C671 652 aaPredicted RBP21.13■□□□□ 0.97
CGREF1-208ENST00000467539 MCM5P33992 734 aa21.13■□□□□ 0.97
CGREF1-208ENST00000467539 MAGEA10P43363 369 aaPredicted RBP21.13■□□□□ 0.97
CGREF1-208ENST00000467539 FXR1P51114 621 aaKnown RBP eCLIP21.13■□□□□ 0.97
CGREF1-208ENST00000467539 MRPL12P52815 198 aaKnown RBP21.13■□□□□ 0.97
CGREF1-208ENST00000467539 GNASQ5JWF2 1037 aa21.13■□□□□ 0.97
CGREF1-208ENST00000467539 CASC1Q6TDU7 716 aa21.13■□□□□ 0.97
CGREF1-208ENST00000467539 EEPD1Q7L9B9 569 aa21.13■□□□□ 0.97
CGREF1-208ENST00000467539 CATIPQ7Z7H3 387 aa21.13■□□□□ 0.97
CGREF1-208ENST00000467539 MCF2L2Q86YR7 1114 aa21.13■□□□□ 0.97
CGREF1-208ENST00000467539 MAP3K14Q99558 947 aa21.13■□□□□ 0.97
CGREF1-208ENST00000467539 AMNQ9BXJ7 453 aa21.13■□□□□ 0.97
CGREF1-208ENST00000467539 RANBP2P49792 3224 aaKnown RBP21.13■□□□□ 0.97
CGREF1-208ENST00000467539 RBM47A0AV96 593 aaKnown RBP21.12■□□□□ 0.97
CGREF1-208ENST00000467539 MYADML2A6NDP7 307 aa21.12■□□□□ 0.97
CGREF1-208ENST00000467539 ZBTB5O15062 677 aa21.12■□□□□ 0.97
CGREF1-208ENST00000467539 CTAGE5O15320 804 aa21.12■□□□□ 0.97
CGREF1-208ENST00000467539 CDC45O75419 566 aa21.12■□□□□ 0.97
CGREF1-208ENST00000467539 SMPD1P17405 629 aa21.12■□□□□ 0.97
CGREF1-208ENST00000467539 IRX5P78411 483 aaPredicted RBP21.12■□□□□ 0.97
CGREF1-208ENST00000467539 NOL8Q76FK4 1167 aaKnown RBP21.12■□□□□ 0.97
CGREF1-208ENST00000467539 TMEM87BQ96K49 555 aa21.12■□□□□ 0.97
CGREF1-208ENST00000467539 MPHOSPH6Q99547 160 aaKnown RBP21.12■□□□□ 0.97
CGREF1-208ENST00000467539 MCM3APO60318 1980 aa21.12■□□□□ 0.97
CGREF1-208ENST00000467539 TRIOBPQ9H2D6 2365 aa21.11■□□□□ 0.97
CGREF1-208ENST00000467539 ELP1O95163 1332 aa21.11■□□□□ 0.97
CGREF1-208ENST00000467539 PRC1O43663 620 aa21.11■□□□□ 0.97
CGREF1-208ENST00000467539 NEFLP07196 543 aa21.11■□□□□ 0.97
CGREF1-208ENST00000467539 ASGR1P07306 291 aa21.11■□□□□ 0.97
CGREF1-208ENST00000467539 EDNRBP24530 442 aa21.11■□□□□ 0.97
CGREF1-208ENST00000467539 TLE2Q04725 743 aa21.11■□□□□ 0.97
CGREF1-208ENST00000467539 TRIM60Q495X7 471 aa21.11■□□□□ 0.97
CGREF1-208ENST00000467539 FBXO16Q8IX29 292 aaPredicted RBP21.11■□□□□ 0.97
CGREF1-208ENST00000467539 AP5M1Q9H0R1 490 aa21.11■□□□□ 0.97
CGREF1-208ENST00000467539 LY9Q9HBG7 655 aa21.11■□□□□ 0.97
CGREF1-208ENST00000467539 PRKAG2Q9UGJ0 569 aa21.11■□□□□ 0.97
CGREF1-208ENST00000467539 DYNC1LI2O43237 492 aaPredicted RBP21.1■□□□□ 0.97
CGREF1-208ENST00000467539 LIFRP42702 1097 aa21.1■□□□□ 0.97
CGREF1-208ENST00000467539 PDE4DQ08499 809 aa21.1■□□□□ 0.97
CGREF1-208ENST00000467539 TRAF1Q13077 416 aa21.1■□□□□ 0.97
CGREF1-208ENST00000467539 SLC35G1Q2M3R5 365 aa21.1■□□□□ 0.97
CGREF1-208ENST00000467539 TSGA10IPQ3SY00 556 aa21.1■□□□□ 0.97
CGREF1-208ENST00000467539 RNF20Q5VTR2 975 aa21.1■□□□□ 0.97
CGREF1-208ENST00000467539 SAMD3Q8N6K7 520 aa21.1■□□□□ 0.97
CGREF1-208ENST00000467539 SYTL5Q8TDW5 730 aaPredicted RBP21.1■□□□□ 0.97
CGREF1-208ENST00000467539 GLT1D1Q96MS3 346 aa21.1■□□□□ 0.97
CGREF1-208ENST00000467539 TOX2Q96NM4 488 aa21.1■□□□□ 0.97
CGREF1-208ENST00000467539 STARD7Q9NQZ5 370 aa21.1■□□□□ 0.97
CGREF1-208ENST00000467539 MAP3K20Q9NYL2 800 aaKnown RBP21.1■□□□□ 0.97
CGREF1-208ENST00000467539 CYTH3O43739 400 aa21.09■□□□□ 0.97
CGREF1-208ENST00000467539 SMARCA1P28370 1054 aa21.09■□□□□ 0.97
CGREF1-208ENST00000467539 CDK7P50613 346 aa21.09■□□□□ 0.97
CGREF1-208ENST00000467539 DUSP28Q4G0W2 176 aa21.09■□□□□ 0.97
CGREF1-208ENST00000467539 TMEM63BQ5T3F8 832 aa21.09■□□□□ 0.97
CGREF1-208ENST00000467539 TAAR1Q96RJ0 339 aa21.09■□□□□ 0.97
CGREF1-208ENST00000467539 WDR11Q9BZH6 1224 aa21.09■□□□□ 0.97
CGREF1-208ENST00000467539 GPHNQ9NQX3 736 aaPredicted RBP21.09■□□□□ 0.97
CGREF1-208ENST00000467539 PCDHA1Q9Y5I3 950 aa21.09■□□□□ 0.97
CGREF1-208ENST00000467539 PNMA6FA0A0J9YX94 578 aa21.08■□□□□ 0.97
CGREF1-208ENST00000467539 SH2B2O14492 632 aaPredicted RBP21.08■□□□□ 0.97
CGREF1-208ENST00000467539 PPP1R11O60927 126 aaPredicted RBP21.08■□□□□ 0.97
CGREF1-208ENST00000467539 GHRHRQ02643 423 aa21.08■□□□□ 0.97
CGREF1-208ENST00000467539 COL9A3Q14050 684 aaPredicted RBP21.08■□□□□ 0.97
CGREF1-208ENST00000467539 ANKRD33Q7Z3H0 272 aa21.08■□□□□ 0.97
CGREF1-208ENST00000467539 TLK2Q86UE8 772 aa21.08■□□□□ 0.97
CGREF1-208ENST00000467539 ZNF654Q8IZM8 581 aa21.08■□□□□ 0.97
CGREF1-208ENST00000467539 NSUN6Q8TEA1 469 aaKnown RBP21.08■□□□□ 0.97
CGREF1-208ENST00000467539 PIGSQ96S52 555 aa21.08■□□□□ 0.97
CGREF1-208ENST00000467539 IWS1Q96ST2 819 aa21.08■□□□□ 0.97
CGREF1-208ENST00000467539 LBHD1Q9BQE6 289 aaPredicted RBP21.08■□□□□ 0.97
CGREF1-208ENST00000467539 UBE2OQ9C0C9 1292 aaKnown RBP21.08■□□□□ 0.97
CGREF1-208ENST00000467539 OPLAHO14841 1288 aa21.07■□□□□ 0.96
CGREF1-208ENST00000467539 ZEB2O60315 1214 aa21.07■□□□□ 0.96
CGREF1-208ENST00000467539 DDAH1O94760 285 aa21.07■□□□□ 0.96
CGREF1-208ENST00000467539 MDM2Q00987 491 aaPredicted RBP21.07■□□□□ 0.96
CGREF1-208ENST00000467539 BEX3Q00994 111 aa21.07■□□□□ 0.96
CGREF1-208ENST00000467539 FSCN1Q16658 493 aaKnown RBP21.07■□□□□ 0.96
CGREF1-208ENST00000467539 VTI1AQ96AJ9 217 aa21.07■□□□□ 0.96
CGREF1-208ENST00000467539 COL20A1Q9P218 1284 aa21.07■□□□□ 0.96
CGREF1-208ENST00000467539 LCTP09848 1927 aa21.06■□□□□ 0.96
CGREF1-208ENST00000467539 TRIM43BA6NCK2 446 aa21.06■□□□□ 0.96
CGREF1-208ENST00000467539 CCDC69A6NI79 296 aa21.06■□□□□ 0.96
CGREF1-208ENST00000467539 DCDC2CA8MYV0 355 aa21.06■□□□□ 0.96
CGREF1-208ENST00000467539 CABYRO75952 493 aa21.06■□□□□ 0.96
CGREF1-208ENST00000467539 CFBP00751 764 aa21.06■□□□□ 0.96
CGREF1-208ENST00000467539 KIF5BP33176 963 aa21.06■□□□□ 0.96
CGREF1-208ENST00000467539 HSD17B4P51659 736 aa21.06■□□□□ 0.96
CGREF1-208ENST00000467539 SH3RF1Q7Z6J0 888 aa21.06■□□□□ 0.96
CGREF1-208ENST00000467539 CTCFLQ8NI51 663 aaPredicted RBP21.06■□□□□ 0.96
CGREF1-208ENST00000467539 TRIM43Q96BQ3 446 aaPredicted RBP21.06■□□□□ 0.96
CGREF1-208ENST00000467539 NEK1Q96PY6 1258 aa21.06■□□□□ 0.96
CGREF1-208ENST00000467539 RMDN3Q96TC7 470 aa21.06■□□□□ 0.96
CGREF1-208ENST00000467539 LZTS2Q9BRK4 669 aa21.06■□□□□ 0.96
CGREF1-208ENST00000467539 PDLIM7Q9NR12 457 aa21.06■□□□□ 0.96
CGREF1-208ENST00000467539 ARVCFO00192 962 aa21.05■□□□□ 0.96
CGREF1-208ENST00000467539 NKRFO15226 690 aaKnown RBP eCLIP21.05■□□□□ 0.96
CGREF1-208ENST00000467539 CLTBP09497 229 aa21.05■□□□□ 0.96
CGREF1-208ENST00000467539 GNAQP50148 359 aa21.05■□□□□ 0.96
CGREF1-208ENST00000467539 EXOSC10Q01780 885 aaKnown RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms