RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 MXD3Q9BW11 206 aa16.52■□□□□ 0.23
PRPF38B-204ENST00000467302 MYO6Q9UM54 1294 aa16.52■□□□□ 0.23
PRPF38B-204ENST00000467302 TRIM49BA6NDI0 452 aa16.51■□□□□ 0.23
PRPF38B-204ENST00000467302 KLRC4O43908 158 aa16.51■□□□□ 0.23
PRPF38B-204ENST00000467302 TUBBP07437 444 aa16.51■□□□□ 0.23
PRPF38B-204ENST00000467302 EEF1GP26641 437 aaKnown RBP16.51■□□□□ 0.23
PRPF38B-204ENST00000467302 VSNL1P62760 191 aa16.51■□□□□ 0.23
PRPF38B-204ENST00000467302 FKBP1AP62942 108 aaKnown RBP16.51■□□□□ 0.23
PRPF38B-204ENST00000467302 HHIPL2Q6UWX4 724 aa16.51■□□□□ 0.23
PRPF38B-204ENST00000467302 STAG2Q8N3U4 1231 aa16.51■□□□□ 0.23
PRPF38B-204ENST00000467302 MAD2L2Q9UI95 211 aa16.51■□□□□ 0.23
PRPF38B-204ENST00000467302 TULP2O00295 520 aa16.5■□□□□ 0.23
PRPF38B-204ENST00000467302 PSMD14O00487 310 aa16.5■□□□□ 0.23
PRPF38B-204ENST00000467302 MYL1P05976 194 aa16.5■□□□□ 0.23
PRPF38B-204ENST00000467302 GYS2P54840 703 aa16.5■□□□□ 0.23
PRPF38B-204ENST00000467302 SEMA3FQ13275 785 aa16.5■□□□□ 0.23
PRPF38B-204ENST00000467302 PICALMQ13492 652 aa16.5■□□□□ 0.23
PRPF38B-204ENST00000467302 TYW1BQ6NUM6 668 aa16.5■□□□□ 0.23
PRPF38B-204ENST00000467302 TRAPPC11Q7Z392 1133 aa16.5■□□□□ 0.23
PRPF38B-204ENST00000467302 TEKT1Q969V4 418 aa16.5■□□□□ 0.23
PRPF38B-204ENST00000467302 THAP9Q9H5L6 903 aa16.5■□□□□ 0.23
PRPF38B-204ENST00000467302 PDE11AQ9HCR9 933 aa16.5■□□□□ 0.23
PRPF38B-204ENST00000467302 USP40Q9NVE5 1235 aa16.5■□□□□ 0.23
PRPF38B-204ENST00000467302 CAPN11Q9UMQ6 739 aa16.5■□□□□ 0.23
PRPF38B-204ENST00000467302 PLIN4Q96Q06 1357 aa16.5■□□□□ 0.23
PRPF38B-204ENST00000467302 RHOBTB3O94955 611 aa16.5■□□□□ 0.23
PRPF38B-204ENST00000467302 RHOXF2BP0C7M4 288 aa16.5■□□□□ 0.23
PRPF38B-204ENST00000467302 MCM6Q14566 821 aa16.5■□□□□ 0.23
PRPF38B-204ENST00000467302 CC2D2BQ6DHV5 1058 aa16.5■□□□□ 0.23
PRPF38B-204ENST00000467302 WDR59Q6PJI9 974 aa16.5■□□□□ 0.23
PRPF38B-204ENST00000467302 DTHD1Q6ZMT9 781 aa16.5■□□□□ 0.23
PRPF38B-204ENST00000467302 NOA1Q8NC60 698 aaKnown RBP16.5■□□□□ 0.23
PRPF38B-204ENST00000467302 GPKOWQ92917 476 aaPredicted RBP eCLIP16.5■□□□□ 0.234e-9■■■■■ 27.3
PRPF38B-204ENST00000467302 RHOXF2Q9BQY4 288 aa16.5■□□□□ 0.23
PRPF38B-204ENST00000467302 TMEM60Q9H2L4 133 aa16.5■□□□□ 0.23
PRPF38B-204ENST00000467302 KBTBD4Q9NVX7 518 aa16.5■□□□□ 0.23
PRPF38B-204ENST00000467302 TRIM10Q9UDY6 481 aa16.5■□□□□ 0.23
PRPF38B-204ENST00000467302 LUC7L2Q9Y383 392 aaKnown RBP16.5■□□□□ 0.23
PRPF38B-204ENST00000467302 CHRNA5P30532 468 aa16.49■□□□□ 0.23
PRPF38B-204ENST00000467302 SCNN1DP51172 638 aa16.49■□□□□ 0.23
PRPF38B-204ENST00000467302 STRIP1Q5VSL9 837 aa16.49■□□□□ 0.23
PRPF38B-204ENST00000467302 WDR93Q6P2C0 686 aa16.49■□□□□ 0.23
PRPF38B-204ENST00000467302 ZNF662Q6ZS27 426 aa16.49■□□□□ 0.23
PRPF38B-204ENST00000467302 DAGLBQ8NCG7 672 aa16.49■□□□□ 0.23
PRPF38B-204ENST00000467302 GIMAP8Q8ND71 665 aaPredicted RBP16.49■□□□□ 0.23
PRPF38B-204ENST00000467302 RASGRP4Q8TDF6 673 aa16.49■□□□□ 0.23
PRPF38B-204ENST00000467302 CCSER1Q9C0I3 900 aa16.49■□□□□ 0.23
PRPF38B-204ENST00000467302 HAUS4Q9H6D7 363 aa16.49■□□□□ 0.23
PRPF38B-204ENST00000467302 DBNDD1Q9H9R9 158 aa16.49■□□□□ 0.23
PRPF38B-204ENST00000467302 SUGCTQ9HAC7 445 aa16.49■□□□□ 0.23
PRPF38B-204ENST00000467302 C10orf71Q711Q0 1435 aa16.49■□□□□ 0.23
PRPF38B-204ENST00000467302 PP2D1A8MPX8 630 aa16.48■□□□□ 0.23
PRPF38B-204ENST00000467302 HERVK_113P62684 666 aa16.48■□□□□ 0.23
PRPF38B-204ENST00000467302 MEA1Q16626 185 aa16.48■□□□□ 0.23
PRPF38B-204ENST00000467302 SLC35G1Q2M3R5 365 aa16.48■□□□□ 0.23
PRPF38B-204ENST00000467302 NCAPH2Q6IBW4 605 aa16.48■□□□□ 0.23
PRPF38B-204ENST00000467302 TTI2Q6NXR4 508 aa16.48■□□□□ 0.23
PRPF38B-204ENST00000467302 LZTS2Q9BRK4 669 aa16.48■□□□□ 0.23
PRPF38B-204ENST00000467302 GBP3Q9H0R5 595 aa16.48■□□□□ 0.23
PRPF38B-204ENST00000467302 GUCA1BQ9UMX6 200 aa16.48■□□□□ 0.23
PRPF38B-204ENST00000467302 PCDHA6Q9UN73 950 aa16.48■□□□□ 0.23
PRPF38B-204ENST00000467302 MTMR7Q9Y216 660 aa16.48■□□□□ 0.23
PRPF38B-204ENST00000467302 PCDHA8Q9Y5H6 950 aa16.48■□□□□ 0.23
PRPF38B-204ENST00000467302 SCN9AQ15858 1988 aa16.48■□□□□ 0.23
PRPF38B-204ENST00000467302 PALM3A6NDB9 673 aaPredicted RBP16.48■□□□□ 0.23
PRPF38B-204ENST00000467302 LRRC15Q8TF66 581 aa16.48■□□□□ 0.23
PRPF38B-204ENST00000467302 TTYH3Q9C0H2 523 aa16.48■□□□□ 0.23
PRPF38B-204ENST00000467302 ZNF219Q9P2Y4 722 aaPredicted RBP16.48■□□□□ 0.23
PRPF38B-204ENST00000467302 MYO3BQ8WXR4 1341 aa16.47■□□□□ 0.23
PRPF38B-204ENST00000467302 ECE2O60344 883 aa16.47■□□□□ 0.23
PRPF38B-204ENST00000467302 EIF3JO75822 258 aaKnown RBP16.47■□□□□ 0.23
PRPF38B-204ENST00000467302 BAG6P46379 1132 aa16.47■□□□□ 0.23
PRPF38B-204ENST00000467302 SF3B2Q13435 895 aaKnown RBP16.47■□□□□ 0.23
PRPF38B-204ENST00000467302 CASP8Q14790 479 aa16.47■□□□□ 0.23
PRPF38B-204ENST00000467302 GALNT17Q6IS24 598 aa16.47■□□□□ 0.23
PRPF38B-204ENST00000467302 SUPT20HQ8NEM7 779 aa16.47■□□□□ 0.23
PRPF38B-204ENST00000467302 C7orf43Q8WVR3 580 aa16.47■□□□□ 0.23
PRPF38B-204ENST00000467302 MRIQ9BWK5 157 aa16.47■□□□□ 0.23
PRPF38B-204ENST00000467302 DDX4Q9NQI0 724 aaKnown RBP16.47■□□□□ 0.23
PRPF38B-204ENST00000467302 SWAP70Q9UH65 585 aa16.47■□□□□ 0.23
PRPF38B-204ENST00000467302 CCDC194A0A1B0GVG4 234 aa16.46■□□□□ 0.23
PRPF38B-204ENST00000467302 PSMA7O14818 248 aa16.46■□□□□ 0.23
PRPF38B-204ENST00000467302 PRPHP41219 470 aa16.46■□□□□ 0.23
PRPF38B-204ENST00000467302 CRKP46108 304 aa16.46■□□□□ 0.23
PRPF38B-204ENST00000467302 NOVP48745 357 aa16.46■□□□□ 0.23
PRPF38B-204ENST00000467302 DNM2P50570 870 aa16.46■□□□□ 0.23
PRPF38B-204ENST00000467302 HDLBPQ00341 1268 aaKnown RBP16.46■□□□□ 0.23
PRPF38B-204ENST00000467302 GABPAQ06546 454 aa16.46■□□□□ 0.23
PRPF38B-204ENST00000467302 STIM1Q13586 685 aa16.46■□□□□ 0.23
PRPF38B-204ENST00000467302 DACT2Q5SW24 774 aa16.46■□□□□ 0.23
PRPF38B-204ENST00000467302 PAPD7Q5XG87 772 aaKnown RBP16.46■□□□□ 0.23
PRPF38B-204ENST00000467302 CDC42EP5Q6NZY7 148 aa16.46■□□□□ 0.23
PRPF38B-204ENST00000467302 NOC3LQ8WTT2 800 aaKnown RBP16.46■□□□□ 0.23
PRPF38B-204ENST00000467302 CEP95Q96GE4 821 aa16.46■□□□□ 0.23
PRPF38B-204ENST00000467302 ZDHHC15Q96MV8 337 aa16.46■□□□□ 0.23
PRPF38B-204ENST00000467302 DUSP9Q99956 384 aaKnown RBP16.46■□□□□ 0.23
PRPF38B-204ENST00000467302 KCNQ5Q9NR82 932 aa16.46■□□□□ 0.23
PRPF38B-204ENST00000467302 RASSF10A6NK89 507 aa16.46■□□□□ 0.23
PRPF38B-204ENST00000467302 KLRF2D3W0D1 207 aa16.46■□□□□ 0.23
PRPF38B-204ENST00000467302 LAD1O00515 517 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms