RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 KANSL2Q9H9L4 492 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 ZNF215Q9UL58 517 aaPredicted RBP12.84□□□□□ -0.35
HPS1-208ENST00000467246 SIPA1L1O43166 1804 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 GREB1LQ9C091 1923 aaPredicted RBP12.84□□□□□ -0.35
HPS1-208ENST00000467246 FANCGO15287 622 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 CCP110O43303 1012 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 C21orf2O43822 256 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 CASP14P31944 242 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 ETF1P62495 437 aaKnown RBP12.84□□□□□ -0.35
HPS1-208ENST00000467246 JAG1P78504 1218 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 GRB10Q13322 594 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 SLFN13Q68D06 897 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 PPP1R18Q6NYC8 613 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 FCHSD1Q86WN1 690 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 CUL5Q93034 780 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 EEF2KMTQ96G04 330 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 NUDT12Q9BQG2 462 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 DESI2Q9BSY9 194 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 TRIM34Q9BYJ4 488 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 NYAP2Q9P242 653 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 MYH4Q9Y623 1939 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 USP17L15C9J2P7 530 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 USP17L13C9JLJ4 530 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 USP17L11C9JVI0 530 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 USP17L18D6R9N7 530 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 USP17L22D6RA61 530 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 USP17L17D6RBQ6 530 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 USP17L19D6RCP7 530 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 USP17L20D6RJB6 530 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 H7C1D1 291 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 GYPCP04921 128 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 FXR1P51114 621 aaKnown RBP eCLIP12.83□□□□□ -0.36
HPS1-208ENST00000467246 FXR2P51116 673 aaKnown RBP eCLIP12.83□□□□□ -0.36
HPS1-208ENST00000467246 MRPL12P52815 198 aaKnown RBP12.83□□□□□ -0.36
HPS1-208ENST00000467246 USP17L24Q0WX57 530 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 STK4Q13043 487 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 QRICH1Q2TAL8 776 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 USP17L6PQ6QN14 398 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 ANKRD7Q92527 254 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 HPS3Q969F9 1004 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 CALML4Q96GE6 196 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 NUP88Q99567 741 aaPredicted RBP12.83□□□□□ -0.36
HPS1-208ENST00000467246 DNAI1Q9UI46 699 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 SOWAHDA6NJG2 315 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 ZSCAN12O43309 604 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 PPIP5K2O43314 1243 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 FCER1AP12319 257 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 ASIC1P78348 528 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 ICA1Q05084 483 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 PDE4DQ08499 809 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 PNMA5Q96PV4 448 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 PANX2Q96RD6 677 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 UIMC1Q96RL1 719 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 C7orf25Q9BPX7 421 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 MAGEF1Q9HAY2 307 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 BLOC1S4Q9NUP1 217 aa12.83□□□□□ -0.36
HPS1-208ENST00000467246 RNF225M0QZC1 329 aaPredicted RBP12.82□□□□□ -0.36
HPS1-208ENST00000467246 SNAP25P60880 206 aa12.82□□□□□ -0.36
HPS1-208ENST00000467246 SPAG1Q07617 926 aa12.82□□□□□ -0.36
HPS1-208ENST00000467246 SRRTQ9BXP5 876 aaKnown RBP12.82□□□□□ -0.36
HPS1-208ENST00000467246 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.82□□□□□ -0.36
HPS1-208ENST00000467246 V9GYY5 206 aaPredicted RBP12.82□□□□□ -0.36
HPS1-208ENST00000467246 F5H6K3 240 aa12.82□□□□□ -0.36
HPS1-208ENST00000467246 PSMA7O14818 248 aa12.82□□□□□ -0.36
HPS1-208ENST00000467246 MFAP3LO75121 409 aa12.82□□□□□ -0.36
HPS1-208ENST00000467246 KLRC3Q07444 240 aa12.82□□□□□ -0.36
HPS1-208ENST00000467246 MCM6Q14566 821 aa12.82□□□□□ -0.36
HPS1-208ENST00000467246 RRP1BQ14684 758 aaKnown RBP12.82□□□□□ -0.36
HPS1-208ENST00000467246 ABCB5Q2M3G0 1257 aa12.82□□□□□ -0.36
HPS1-208ENST00000467246 PPP4R3AQ6IN85 833 aa12.82□□□□□ -0.36
HPS1-208ENST00000467246 TTI2Q6NXR4 508 aa12.82□□□□□ -0.36
HPS1-208ENST00000467246 HAS1Q92839 578 aa12.82□□□□□ -0.36
HPS1-208ENST00000467246 TRIM47Q96LD4 638 aa12.82□□□□□ -0.36
HPS1-208ENST00000467246 CAMKK2Q96RR4 588 aa12.82□□□□□ -0.36
HPS1-208ENST00000467246 EXOC1Q9NV70 894 aa12.82□□□□□ -0.36
HPS1-208ENST00000467246 DDX25Q9UHL0 483 aaKnown RBP12.82□□□□□ -0.36
HPS1-208ENST00000467246 PCDHA1Q9Y5I3 950 aa12.82□□□□□ -0.36
HPS1-208ENST00000467246 NPM3O75607 178 aaKnown RBP12.81□□□□□ -0.36
HPS1-208ENST00000467246 STIM1Q13586 685 aa12.81□□□□□ -0.36
HPS1-208ENST00000467246 CDC37Q16543 378 aaPredicted RBP12.81□□□□□ -0.36
HPS1-208ENST00000467246 TMEM266Q2M3C6 531 aa12.81□□□□□ -0.36
HPS1-208ENST00000467246 RAD9BQ6WBX8 426 aa12.81□□□□□ -0.36
HPS1-208ENST00000467246 TMEM179Q6ZVK1 233 aa12.81□□□□□ -0.36
HPS1-208ENST00000467246 ANKRD20A12PQ8NF67 263 aa12.81□□□□□ -0.36
HPS1-208ENST00000467246 DCAF4Q8WV16 495 aa12.81□□□□□ -0.36
HPS1-208ENST00000467246 TNS1Q9HBL0 1735 aaKnown RBP12.81□□□□□ -0.36
HPS1-208ENST00000467246 ZNF646O15015 1829 aaPredicted RBP12.81□□□□□ -0.36
HPS1-208ENST00000467246 MYMKA6NI61 221 aa12.81□□□□□ -0.36
HPS1-208ENST00000467246 AMPD3Q01432 767 aa12.81□□□□□ -0.36
HPS1-208ENST00000467246 UBXN1Q04323 297 aa12.81□□□□□ -0.36
HPS1-208ENST00000467246 PDIA5Q14554 519 aa12.81□□□□□ -0.36
HPS1-208ENST00000467246 SV2BQ7L1I2 683 aa12.81□□□□□ -0.36
HPS1-208ENST00000467246 KCNK18Q7Z418 384 aa12.81□□□□□ -0.36
HPS1-208ENST00000467246 DUSP9Q99956 384 aaKnown RBP12.81□□□□□ -0.36
HPS1-208ENST00000467246 L2HGDHQ9H9P8 463 aa12.81□□□□□ -0.36
HPS1-208ENST00000467246 STK32BQ9NY57 414 aa12.81□□□□□ -0.36
HPS1-208ENST00000467246 CGNQ9P2M7 1197 aaKnown RBP12.81□□□□□ -0.36
HPS1-208ENST00000467246 ATF5Q9Y2D1 282 aaPredicted RBP12.81□□□□□ -0.36
HPS1-208ENST00000467246 ITIH6Q6UXX5 1313 aa12.81□□□□□ -0.36
HPS1-208ENST00000467246 GH2P01242 217 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms