RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 COL19A1Q14993 1142 aa17.65■□□□□ 0.42
HMGXB4-206ENST00000466438 TTF1Q15361 905 aaPredicted RBP17.65■□□□□ 0.42
HMGXB4-206ENST00000466438 PTPROQ16827 1216 aa17.65■□□□□ 0.42
HMGXB4-206ENST00000466438 NFRKBQ6P4R8 1299 aa17.65■□□□□ 0.42
HMGXB4-206ENST00000466438 AMOTL1Q8IY63 956 aa17.65■□□□□ 0.42
HMGXB4-206ENST00000466438 FBXO22Q8NEZ5 403 aa17.65■□□□□ 0.42
HMGXB4-206ENST00000466438 EAF2Q96CJ1 260 aaPredicted RBP17.65■□□□□ 0.42
HMGXB4-206ENST00000466438 POP1Q99575 1024 aaKnown RBP17.65■□□□□ 0.42
HMGXB4-206ENST00000466438 ATP8A2Q9NTI2 1148 aa17.65■□□□□ 0.42
HMGXB4-206ENST00000466438 COG6Q9Y2V7 657 aa17.65■□□□□ 0.42
HMGXB4-206ENST00000466438 SCN10AQ9Y5Y9 1956 aa17.65■□□□□ 0.42
HMGXB4-206ENST00000466438 ZNF532Q9HCE3 1301 aa17.65■□□□□ 0.42
HMGXB4-206ENST00000466438 GREB1LQ9C091 1923 aaPredicted RBP17.64■□□□□ 0.42
HMGXB4-206ENST00000466438 CYP2D7A0A087X1C5 515 aa17.64■□□□□ 0.41
HMGXB4-206ENST00000466438 SURF6O75683 361 aaKnown RBP17.64■□□□□ 0.41
HMGXB4-206ENST00000466438 CT47B1P0C2W7 299 aaPredicted RBP17.64■□□□□ 0.41
HMGXB4-206ENST00000466438 CPT1AP50416 773 aa17.64■□□□□ 0.41
HMGXB4-206ENST00000466438 NBPF20Q3BBV1 942 aa17.64■□□□□ 0.41
HMGXB4-206ENST00000466438 DUSP28Q4G0W2 176 aa17.64■□□□□ 0.41
HMGXB4-206ENST00000466438 EEPD1Q7L9B9 569 aa17.64■□□□□ 0.41
HMGXB4-206ENST00000466438 ARHGAP45Q92619 1136 aa17.64■□□□□ 0.41
HMGXB4-206ENST00000466438 EDAQ92838 391 aa17.64■□□□□ 0.41
HMGXB4-206ENST00000466438 CRBNQ96SW2 442 aa17.64■□□□□ 0.41
HMGXB4-206ENST00000466438 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.64■□□□□ 0.41
HMGXB4-206ENST00000466438 VTA1Q9NP79 307 aa17.64■□□□□ 0.41
HMGXB4-206ENST00000466438 GPHNQ9NQX3 736 aaPredicted RBP17.64■□□□□ 0.41
HMGXB4-206ENST00000466438 DDX49Q9Y6V7 483 aaKnown RBP17.64■□□□□ 0.41
HMGXB4-206ENST00000466438 BAZ2AQ9UIF9 1905 aaKnown RBP17.64■□□□□ 0.41
HMGXB4-206ENST00000466438 TCRBV5S4A2TA0A5A2 114 aa17.63■□□□□ 0.41
HMGXB4-206ENST00000466438 MYL3P08590 195 aa17.63■□□□□ 0.41
HMGXB4-206ENST00000466438 PTPN11Q06124 597 aaPredicted RBP17.63■□□□□ 0.41
HMGXB4-206ENST00000466438 CNKSR3Q6P9H4 555 aa17.63■□□□□ 0.41
HMGXB4-206ENST00000466438 KIAA1211Q6ZU35 1233 aa17.63■□□□□ 0.41
HMGXB4-206ENST00000466438 SUGP1Q8IWZ8 645 aaKnown RBP17.63■□□□□ 0.41
HMGXB4-206ENST00000466438 CCDC155Q8N6L0 562 aa17.63■□□□□ 0.41
HMGXB4-206ENST00000466438 SSH3Q8TE77 659 aa17.63■□□□□ 0.41
HMGXB4-206ENST00000466438 AFAP1L1Q8TED9 768 aa17.63■□□□□ 0.41
HMGXB4-206ENST00000466438 ARMT1Q9H993 441 aa17.63■□□□□ 0.41
HMGXB4-206ENST00000466438 NYAP2Q9P242 653 aa17.63■□□□□ 0.41
HMGXB4-206ENST00000466438 FEM1BQ9UK73 627 aa17.63■□□□□ 0.41
HMGXB4-206ENST00000466438 NOD1Q9Y239 953 aa17.63■□□□□ 0.41
HMGXB4-206ENST00000466438 ABHD14A-ACY1A0A1B0GW23 586 aa17.62■□□□□ 0.41
HMGXB4-206ENST00000466438 PRKAB2O43741 272 aa17.62■□□□□ 0.41
HMGXB4-206ENST00000466438 GPNMBQ14956 572 aa17.62■□□□□ 0.41
HMGXB4-206ENST00000466438 EP400NLQ6ZTU2 488 aa17.62■□□□□ 0.41
HMGXB4-206ENST00000466438 ERMP1Q7Z2K6 904 aa17.62■□□□□ 0.41
HMGXB4-206ENST00000466438 RNF135Q8IUD6 432 aa17.62■□□□□ 0.41
HMGXB4-206ENST00000466438 BANK1Q8NDB2 785 aa17.62■□□□□ 0.41
HMGXB4-206ENST00000466438 CAGE1Q8TC20 777 aa17.62■□□□□ 0.41
HMGXB4-206ENST00000466438 PBXIP1Q96AQ6 731 aa17.62■□□□□ 0.41
HMGXB4-206ENST00000466438 C17orf80Q9BSJ5 609 aa17.62■□□□□ 0.41
HMGXB4-206ENST00000466438 RNF146Q9NTX7 359 aa17.62■□□□□ 0.41
HMGXB4-206ENST00000466438 TMEM221A6NGB7 291 aa17.61■□□□□ 0.41
HMGXB4-206ENST00000466438 M0R296 226 aa17.61■□□□□ 0.41
HMGXB4-206ENST00000466438 EFCAB14O75071 495 aa17.61■□□□□ 0.41
HMGXB4-206ENST00000466438 PARNO95453 639 aaKnown RBP17.61■□□□□ 0.41
HMGXB4-206ENST00000466438 FDX1P10109 184 aa17.61■□□□□ 0.41
HMGXB4-206ENST00000466438 SMAD2Q15796 467 aaKnown RBP17.61■□□□□ 0.41
HMGXB4-206ENST00000466438 TCEAL5Q5H9L2 206 aa17.61■□□□□ 0.41
HMGXB4-206ENST00000466438 IRF2BPLQ9H1B7 796 aa17.61■□□□□ 0.41
HMGXB4-206ENST00000466438 FAM86C1Q9NVL1 165 aa17.61■□□□□ 0.41
HMGXB4-206ENST00000466438 NOP58Q9Y2X3 529 aaKnown RBP17.61■□□□□ 0.41
HMGXB4-206ENST00000466438 CACNA1HO95180 2353 aa17.6■□□□□ 0.41
HMGXB4-206ENST00000466438 CXCL10P02778 98 aa17.6■□□□□ 0.41
HMGXB4-206ENST00000466438 BRDTQ58F21 947 aaPredicted RBP17.6■□□□□ 0.41
HMGXB4-206ENST00000466438 TRIM67Q6ZTA4 783 aa17.6■□□□□ 0.41
HMGXB4-206ENST00000466438 MORC4Q8TE76 937 aa17.6■□□□□ 0.41
HMGXB4-206ENST00000466438 PPP1R13LQ8WUF5 828 aa17.6■□□□□ 0.41
HMGXB4-206ENST00000466438 INSL6Q9Y581 213 aa17.6■□□□□ 0.41
HMGXB4-206ENST00000466438 KMT2EQ8IZD2 1858 aa17.6■□□□□ 0.41
HMGXB4-206ENST00000466438 MBD4O95243 580 aa17.59■□□□□ 0.41
HMGXB4-206ENST00000466438 SELPP16109 830 aa17.59■□□□□ 0.41
HMGXB4-206ENST00000466438 TKFCQ3LXA3 575 aa17.59■□□□□ 0.41
HMGXB4-206ENST00000466438 LRRC8DQ7L1W4 858 aa17.59■□□□□ 0.41
HMGXB4-206ENST00000466438 OR6J1Q8NGC5 347 aa17.59■□□□□ 0.41
HMGXB4-206ENST00000466438 DDRGK1Q96HY6 314 aa17.59■□□□□ 0.41
HMGXB4-206ENST00000466438 SAMD11Q96NU1 681 aa17.59■□□□□ 0.41
HMGXB4-206ENST00000466438 WDR11Q9BZH6 1224 aa17.59■□□□□ 0.41
HMGXB4-206ENST00000466438 NSUN3Q9H649 340 aaKnown RBP17.59■□□□□ 0.41
HMGXB4-206ENST00000466438 ALG13Q9NP73 1137 aaKnown RBP17.59■□□□□ 0.41
HMGXB4-206ENST00000466438 CLDND1Q9NY35 253 aa17.59■□□□□ 0.41
HMGXB4-206ENST00000466438 TRIP12Q14669 1992 aaPredicted RBP17.59■□□□□ 0.41
HMGXB4-206ENST00000466438 RAD50Q92878 1312 aa17.58■□□□□ 0.4
HMGXB4-206ENST00000466438 KPNA6O60684 536 aa17.58■□□□□ 0.4
HMGXB4-206ENST00000466438 ATP8B2P98198 1209 aa17.58■□□□□ 0.4
HMGXB4-206ENST00000466438 PTGISQ16647 500 aa17.58■□□□□ 0.4
HMGXB4-206ENST00000466438 FAM117BQ6P1L5 589 aa17.58■□□□□ 0.4
HMGXB4-206ENST00000466438 RPAP2Q8IXW5 612 aaPredicted RBP17.58■□□□□ 0.4
HMGXB4-206ENST00000466438 FBXL6Q8N531 539 aa17.58■□□□□ 0.4
HMGXB4-206ENST00000466438 CYP39A1Q9NYL5 469 aa17.58■□□□□ 0.4
HMGXB4-206ENST00000466438 PTPRZ1P23471 2315 aaPredicted RBP17.58■□□□□ 0.4
HMGXB4-206ENST00000466438 MYO15AQ9UKN7 3530 aa17.57■□□□□ 0.4
HMGXB4-206ENST00000466438 H3BNC9 293 aa17.57■□□□□ 0.4
HMGXB4-206ENST00000466438 NCK2O43639 380 aa17.57■□□□□ 0.4
HMGXB4-206ENST00000466438 NBNO60934 754 aa17.57■□□□□ 0.4
HMGXB4-206ENST00000466438 BCAR3O75815 825 aa17.57■□□□□ 0.4
HMGXB4-206ENST00000466438 LTBRP36941 435 aa17.57■□□□□ 0.4
HMGXB4-206ENST00000466438 RBL2Q08999 1139 aa17.57■□□□□ 0.4
HMGXB4-206ENST00000466438 IKBKEQ14164 716 aa17.57■□□□□ 0.4
HMGXB4-206ENST00000466438 TCTN1Q2MV58 587 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms