RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 ZBTB21Q9ULJ3 1066 aa15.29■□□□□ 0.04
UBE4B-206ENST00000466379 GDAQ9Y2T3 454 aa15.29■□□□□ 0.04
UBE4B-206ENST00000466379 SYNRGQ9UMZ2 1314 aa15.29■□□□□ 0.04
UBE4B-206ENST00000466379 ZNF18P17022 549 aa15.29■□□□□ 0.04
UBE4B-206ENST00000466379 ERCC5P28715 1186 aaPredicted RBP15.29■□□□□ 0.04
UBE4B-206ENST00000466379 RASSF7Q02833 373 aa15.29■□□□□ 0.04
UBE4B-206ENST00000466379 AK8Q96MA6 479 aa15.29■□□□□ 0.04
UBE4B-206ENST00000466379 MAPK8IP1Q9UQF2 711 aa15.29■□□□□ 0.04
UBE4B-206ENST00000466379 POTEMA6NI47 508 aa15.28■□□□□ 0.04
UBE4B-206ENST00000466379 MTMR14Q8NCE2 650 aa15.28■□□□□ 0.04
UBE4B-206ENST00000466379 ZBED3Q96IU2 234 aaPredicted RBP15.28■□□□□ 0.04
UBE4B-206ENST00000466379 ARHGEF10LQ9HCE6 1279 aa15.28■□□□□ 0.04
UBE4B-206ENST00000466379 CBFA2T2O43439 604 aa15.28■□□□□ 0.04
UBE4B-206ENST00000466379 MYO1BO43795 1136 aa15.28■□□□□ 0.04
UBE4B-206ENST00000466379 CCZ1BP86790 482 aa15.28■□□□□ 0.04
UBE4B-206ENST00000466379 CCZ1P86791 482 aaPredicted RBP15.28■□□□□ 0.04
UBE4B-206ENST00000466379 ORC2Q13416 577 aaPredicted RBP15.28■□□□□ 0.04
UBE4B-206ENST00000466379 DHX8Q14562 1220 aaKnown RBP15.28■□□□□ 0.04
UBE4B-206ENST00000466379 ARMCX5Q6P1M9 558 aa15.28■□□□□ 0.04
UBE4B-206ENST00000466379 IGSF22Q8N9C0 903 aa15.28■□□□□ 0.04
UBE4B-206ENST00000466379 P2RX7Q99572 595 aaKnown RBP15.28■□□□□ 0.04
UBE4B-206ENST00000466379 IMPACTQ9P2X3 320 aa15.28■□□□□ 0.04
UBE4B-206ENST00000466379 DDX25Q9UHL0 483 aaKnown RBP15.28■□□□□ 0.04
UBE4B-206ENST00000466379 SKILP12757 684 aa15.27■□□□□ 0.04
UBE4B-206ENST00000466379 GOLGA8FQ08AF8 430 aa15.27■□□□□ 0.04
UBE4B-206ENST00000466379 GOLGA8DPQ0D2H9 430 aa15.27■□□□□ 0.04
UBE4B-206ENST00000466379 FAM83BQ5T0W9 1011 aa15.27■□□□□ 0.04
UBE4B-206ENST00000466379 FBXO11Q86XK2 927 aa15.27■□□□□ 0.04
UBE4B-206ENST00000466379 AMNQ9BXJ7 453 aa15.27■□□□□ 0.04
UBE4B-206ENST00000466379 GLIS2Q9BZE0 524 aaPredicted RBP15.27■□□□□ 0.04
UBE4B-206ENST00000466379 LRWD1Q9UFC0 647 aa15.27■□□□□ 0.04
UBE4B-206ENST00000466379 PRR12Q9ULL5 1215 aa15.27■□□□□ 0.04
UBE4B-206ENST00000466379 MEIS2O14770 477 aa15.27■□□□□ 0.03
UBE4B-206ENST00000466379 GSDMDP57764 484 aa15.27■□□□□ 0.03
UBE4B-206ENST00000466379 SPATA1Q5VX52 437 aa15.27■□□□□ 0.03
UBE4B-206ENST00000466379 SAMD1Q6SPF0 538 aaPredicted RBP15.27■□□□□ 0.03
UBE4B-206ENST00000466379 ANO3Q9BYT9 981 aa15.27■□□□□ 0.03
UBE4B-206ENST00000466379 KBTBD4Q9NVX7 518 aa15.27■□□□□ 0.03
UBE4B-206ENST00000466379 PGAP2Q9UHJ9 254 aa15.27■□□□□ 0.03
UBE4B-206ENST00000466379 ASTN2O75129 1339 aaPredicted RBP15.26■□□□□ 0.03
UBE4B-206ENST00000466379 PSDA5PKW4 1024 aaPredicted RBP15.26■□□□□ 0.03
UBE4B-206ENST00000466379 KLRC4O43908 158 aa15.26■□□□□ 0.03
UBE4B-206ENST00000466379 PRELPP51888 382 aa15.26■□□□□ 0.03
UBE4B-206ENST00000466379 KMT5BQ4FZB7 885 aa15.26■□□□□ 0.03
UBE4B-206ENST00000466379 ZNF658Q5TYW1 1059 aaPredicted RBP15.26■□□□□ 0.03
UBE4B-206ENST00000466379 FKBP1CQ5VVH2 108 aa15.26■□□□□ 0.03
UBE4B-206ENST00000466379 FAM83AQ86UY5 434 aa15.26■□□□□ 0.03
UBE4B-206ENST00000466379 VSTM4Q8IW00 320 aa15.26■□□□□ 0.03
UBE4B-206ENST00000466379 NUDT12Q9BQG2 462 aa15.26■□□□□ 0.03
UBE4B-206ENST00000466379 TMX2Q9Y320 296 aa15.26■□□□□ 0.03
UBE4B-206ENST00000466379 FXR2P51116 673 aaKnown RBP eCLIP15.26■□□□□ 0.031e-6■■■□□ 15.3
UBE4B-206ENST00000466379 GRB10Q13322 594 aa15.26■□□□□ 0.03
UBE4B-206ENST00000466379 TMEM266Q2M3C6 531 aa15.26■□□□□ 0.03
UBE4B-206ENST00000466379 PPP4R3AQ6IN85 833 aa15.26■□□□□ 0.03
UBE4B-206ENST00000466379 HAS1Q92839 578 aa15.26■□□□□ 0.03
UBE4B-206ENST00000466379 PNMA5Q96PV4 448 aa15.26■□□□□ 0.03
UBE4B-206ENST00000466379 RMND1Q9NWS8 449 aa15.26■□□□□ 0.03
UBE4B-206ENST00000466379 GJA3Q9Y6H8 435 aa15.26■□□□□ 0.03
UBE4B-206ENST00000466379 SMCHD1A6NHR9 2005 aa15.25■□□□□ 0.03
UBE4B-206ENST00000466379 CAP2P40123 477 aa15.25■□□□□ 0.03
UBE4B-206ENST00000466379 PRCPP42785 496 aa15.25■□□□□ 0.03
UBE4B-206ENST00000466379 RASA3Q14644 834 aa15.25■□□□□ 0.03
UBE4B-206ENST00000466379 BTNL9Q6UXG8 535 aa15.25■□□□□ 0.03
UBE4B-206ENST00000466379 SAMD7Q7Z3H4 446 aa15.25■□□□□ 0.03
UBE4B-206ENST00000466379 CCDC125Q86Z20 511 aa15.25■□□□□ 0.03
UBE4B-206ENST00000466379 NELFBQ8WX92 580 aa15.25■□□□□ 0.03
UBE4B-206ENST00000466379 CALML4Q96GE6 196 aa15.25■□□□□ 0.03
UBE4B-206ENST00000466379 USP27XA6NNY8 438 aa15.24■□□□□ 0.03
UBE4B-206ENST00000466379 MARCH6O60337 910 aa15.24■□□□□ 0.03
UBE4B-206ENST00000466379 HOXA13P31271 388 aaPredicted RBP15.24■□□□□ 0.03
UBE4B-206ENST00000466379 STAT2P52630 851 aa15.24■□□□□ 0.03
UBE4B-206ENST00000466379 TNIP1Q15025 636 aa15.24■□□□□ 0.03
UBE4B-206ENST00000466379 CCDC174Q6PII3 467 aa15.24■□□□□ 0.03
UBE4B-206ENST00000466379 SNX29Q8TEQ0 813 aa15.24■□□□□ 0.03
UBE4B-206ENST00000466379 GOPCQ9HD26 462 aa15.24■□□□□ 0.03
UBE4B-206ENST00000466379 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.24■□□□□ 0.03
UBE4B-206ENST00000466379 OPLAHO14841 1288 aa15.24■□□□□ 0.03
UBE4B-206ENST00000466379 TBC1D12O60347 775 aa15.24■□□□□ 0.03
UBE4B-206ENST00000466379 GMPSP49915 693 aaPredicted RBP15.24■□□□□ 0.03
UBE4B-206ENST00000466379 PAK1Q13153 545 aa15.24■□□□□ 0.03
UBE4B-206ENST00000466379 TPD52L1Q16890 204 aaPredicted RBP15.24■□□□□ 0.03
UBE4B-206ENST00000466379 CT47A1Q5JQC4 288 aaPredicted RBP15.24■□□□□ 0.03
UBE4B-206ENST00000466379 CCDC150Q8NCX0 1101 aa15.24■□□□□ 0.03
UBE4B-206ENST00000466379 KIFC2Q96AC6 838 aa15.24■□□□□ 0.03
UBE4B-206ENST00000466379 TRIM49BA6NDI0 452 aa15.23■□□□□ 0.03
UBE4B-206ENST00000466379 SFPQP23246 707 aaKnown RBP eCLIP15.23■□□□□ 0.03
UBE4B-206ENST00000466379 TBC1D10BQ4KMP7 808 aaPredicted RBP15.23■□□□□ 0.03
UBE4B-206ENST00000466379 CDKAL1Q5VV42 579 aa15.23■□□□□ 0.03
UBE4B-206ENST00000466379 APTXQ7Z2E3 356 aaKnown RBP15.23■□□□□ 0.03
UBE4B-206ENST00000466379 MICALL2Q8IY33 904 aa15.23■□□□□ 0.03
UBE4B-206ENST00000466379 CDK5RAP3Q96JB5 506 aa15.23■□□□□ 0.03
UBE4B-206ENST00000466379 SGIP1Q9BQI5 828 aa15.23■□□□□ 0.03
UBE4B-206ENST00000466379 TRIM9Q9C026 710 aa15.23■□□□□ 0.03
UBE4B-206ENST00000466379 GLT8D2Q9H1C3 349 aa15.23■□□□□ 0.03
UBE4B-206ENST00000466379 CUEDC2Q9H467 287 aa15.23■□□□□ 0.03
UBE4B-206ENST00000466379 BLOC1S4Q9NUP1 217 aa15.23■□□□□ 0.03
UBE4B-206ENST00000466379 ASIC1P78348 528 aa15.23■□□□□ 0.03
UBE4B-206ENST00000466379 MCM6Q14566 821 aa15.23■□□□□ 0.03
UBE4B-206ENST00000466379 ECM1Q16610 540 aa15.23■□□□□ 0.03
UBE4B-206ENST00000466379 KCNK18Q7Z418 384 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms